BLASTX nr result

ID: Cimicifuga21_contig00015367 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015367
         (1442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312197.1| dicer-like protein [Populus trichocarpa] gi|...   404   e-110
ref|XP_002315119.1| dicer-like protein [Populus trichocarpa] gi|...   398   e-108
ref|XP_003535104.1| PREDICTED: endoribonuclease Dicer homolog 2-...   395   e-107
ref|XP_003534774.1| PREDICTED: endoribonuclease Dicer homolog 2-...   392   e-107
ref|XP_002269915.2| PREDICTED: endoribonuclease Dicer homolog 2-...   390   e-106

>ref|XP_002312197.1| dicer-like protein [Populus trichocarpa] gi|222852017|gb|EEE89564.1|
            dicer-like protein [Populus trichocarpa]
          Length = 1468

 Score =  404 bits (1037), Expect = e-110
 Identities = 214/381 (56%), Positives = 270/381 (70%), Gaps = 2/381 (0%)
 Frame = -2

Query: 1441 QQLFRRNEYHDEGLLSTQREKMISNNALCKLGCERKLQGFIRYECFNPKHWVIPGDLPKC 1262
            QQLF+  + H EGLLS +++K+ISN ALC+ GC  KLQGFIR E F+PK W+IPG     
Sbjct: 1078 QQLFKIYQNHHEGLLSFKKDKIISNAALCRRGCNHKLQGFIRNESFDPKLWIIPGGKLGS 1137

Query: 1261 SRLDEFPLLTSGKIYIQGSRLMKSKVVADVVEGLIGAYLIEGGELAALVFMDWLGLKIDF 1082
              L E PL    KIYI+G R +KSK +ADVVE LIGAYL  GGE+ AL+FMDW+G+K+DF
Sbjct: 1138 DFLSEEPLSKGRKIYIRGRRKVKSKTIADVVEALIGAYLSTGGEVTALLFMDWIGIKVDF 1197

Query: 1081 VKEIPNDRQFTLQPERLVNVDQLETLLKYHFIDPSLLLEALTHGSYQLPEILRCYQRLEF 902
            +   P +R   LQ E+ VNV  LE+LL Y F DPSLL+EALTHGSY LPEI RCYQRLEF
Sbjct: 1198 MNT-PYERHIQLQAEKFVNVRYLESLLNYSFNDPSLLVEALTHGSYMLPEIPRCYQRLEF 1256

Query: 901  LGDSVLDYLITFYMYTKYPGIAPGQLTDLRSSAVNNDCYALAAVKXXXXXXXXXXXXXXH 722
            LGD+VLDYLIT +MY +YPG++PG LTDLRS++VNNDCYAL+AVK              H
Sbjct: 1257 LGDAVLDYLITLHMYKEYPGMSPGLLTDLRSASVNNDCYALSAVKVGLDRHILHASHDLH 1316

Query: 721  EHVENFVESVGKLSFQSTCGWESDTTVPKVLGDVIESLAGAILVDSGY-KEIVWECIIPI 545
            +H+   V+ + + S +ST GWES+T  PKVLGDVIESLAGAILVDSGY KE+V+E I P+
Sbjct: 1317 KHIVATVKKIQEFSLESTFGWESETAFPKVLGDVIESLAGAILVDSGYNKEVVFESIRPL 1376

Query: 544  LEPLATLDTMKLHPVKELEALCLSKSYEIQISVTSVDG-NPSVSIEVEANGVLYSDTRTG 368
            LEPL T +T++L PV+EL  LC  + ++ +  + S +G N SV+IEVEANG+++  T T 
Sbjct: 1377 LEPLITPETLRLQPVRELNELCQRQHFDYKKPIVSRNGRNASVTIEVEANGLIFKHTATV 1436

Query: 367  MNXXXXXXXXXXTVLEKLKAS 305
             +           VL+ LK S
Sbjct: 1437 ADKTTAKKLASKEVLKALKES 1457


>ref|XP_002315119.1| dicer-like protein [Populus trichocarpa] gi|222864159|gb|EEF01290.1|
            dicer-like protein [Populus trichocarpa]
          Length = 1408

 Score =  398 bits (1022), Expect = e-108
 Identities = 214/381 (56%), Positives = 265/381 (69%), Gaps = 2/381 (0%)
 Frame = -2

Query: 1441 QQLFRRNEYHDEGLLSTQREKMISNNALCKLGCERKLQGFIRYECFNPKHWVIPGDLPKC 1262
            QQLF+  + H EGLLS ++EK+ISN ALC+ GC+ KL GFIR E F+PK W+IPGD    
Sbjct: 1017 QQLFKLYQNHHEGLLSMKKEKIISNAALCRRGCDHKLPGFIRNESFDPKLWMIPGDKCGS 1076

Query: 1261 SRLDEFPLLTSGKIYIQGSRLMKSKVVADVVEGLIGAYLIEGGELAALVFMDWLGLKIDF 1082
              L E PL    KIY++G R +KSK VADVVE LIGAYL  GGE+ AL FMDW+G+K+DF
Sbjct: 1077 DLLSEEPLSECRKIYVRGRRKVKSKTVADVVEALIGAYLSTGGEVLALFFMDWIGIKVDF 1136

Query: 1081 VKEIPNDRQFTLQPERLVNVDQLETLLKYHFIDPSLLLEALTHGSYQLPEILRCYQRLEF 902
            +  +P +R F LQ E+ VNV  LE+LL Y F DPSLL+EALTHGSY LPEI  CYQRLEF
Sbjct: 1137 MI-VPYERHFQLQAEKFVNVRYLESLLNYSFRDPSLLVEALTHGSYMLPEIPSCYQRLEF 1195

Query: 901  LGDSVLDYLITFYMYTKYPGIAPGQLTDLRSSAVNNDCYALAAVKXXXXXXXXXXXXXXH 722
            LGD+VLDYLIT ++Y +YPG++PG LTDLRS++VNNDCYA +AVK              H
Sbjct: 1196 LGDAVLDYLITMHLYKEYPGMSPGLLTDLRSASVNNDCYAQSAVKGDLHKHILHTSQDLH 1255

Query: 721  EHVENFVESVGKLSFQSTCGWESDTTVPKVLGDVIESLAGAILVDSGY-KEIVWECIIPI 545
            +H+    E   K S  ST GWES+T+ PKVLGDVIESLAGAILVDSGY KEIV++ I P+
Sbjct: 1256 KHIVETAEIFQKSSLGSTFGWESETSFPKVLGDVIESLAGAILVDSGYNKEIVFQSIRPL 1315

Query: 544  LEPLATLDTMKLHPVKELEALCLSKSYEIQISVTSVDG-NPSVSIEVEANGVLYSDTRTG 368
            LEPL T  T++LHP +EL  LC  + ++ + SV S +G N S++I V ANGV +  T T 
Sbjct: 1316 LEPLITPATVRLHPARELSELCQKQHFDYKKSVVSYNGRNASITIVVGANGVTFKHTATA 1375

Query: 367  MNXXXXXXXXXXTVLEKLKAS 305
             +           VL+ LK S
Sbjct: 1376 ADKKTAKKLASKEVLKSLKES 1396


>ref|XP_003535104.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Glycine max]
          Length = 1414

 Score =  395 bits (1015), Expect = e-107
 Identities = 205/355 (57%), Positives = 261/355 (73%), Gaps = 3/355 (0%)
 Frame = -2

Query: 1441 QQLFRRNEYHDEGLLSTQREKMISNNALCKLGCERKLQGFIRYECFNPKHWVIPGDLPKC 1262
            QQLF+    H EGLLS +REK+ISN ALCKLGC   L GFIR E F+P  W+IPGD P+ 
Sbjct: 1008 QQLFKTYHNHHEGLLSLKREKIISNAALCKLGCSSGLPGFIRNEPFDPNTWIIPGDKPRS 1067

Query: 1261 SRLDEFPLLTSGK-IYIQGSRLMKSKVVADVVEGLIGAYLIEGGELAALVFMDWLGLKID 1085
             +L E  L+  GK IY+ G R ++ K+VADVVE LIGA+L  GGE AAL+FMDW+G+K+ 
Sbjct: 1068 FKLKE--LVAKGKTIYVSGKRKLRQKIVADVVEALIGAFLSTGGEKAALLFMDWVGIKVS 1125

Query: 1084 FVKEIPNDRQFTLQPERLVNVDQLETLLKYHFIDPSLLLEALTHGSYQLPEILRCYQRLE 905
            F K IP DR F +QPE+LVNV  LE+ L Y F D SLL+EA+THGSY LPE+ RCYQRLE
Sbjct: 1126 FNK-IPYDRHFDIQPEKLVNVSFLESQLNYSFHDRSLLVEAVTHGSYMLPEVPRCYQRLE 1184

Query: 904  FLGDSVLDYLITFYMYTKYPGIAPGQLTDLRSSAVNNDCYALAAVKXXXXXXXXXXXXXX 725
            FLGDSVLDYLIT+++Y KYPG+ PGQLTD+RS++VNNDCYA +A+K              
Sbjct: 1185 FLGDSVLDYLITWHLYNKYPGMTPGQLTDMRSASVNNDCYAWSAIKHGLHKHVLHASQEL 1244

Query: 724  HEHVENFVESVGKLSFQSTCGWESDTTVPKVLGDVIESLAGAILVDSGY-KEIVWECIIP 548
            H HV   +    KLS  ST G+E++T++PKVLGD++ESLAGAILVDSGY KE+VW+ I P
Sbjct: 1245 HMHVSATLNKFDKLSSLSTFGYEAETSLPKVLGDIVESLAGAILVDSGYNKEVVWQSIRP 1304

Query: 547  ILEPLATLDTMKLHPVKELEALCLSKSYEIQI-SVTSVDGNPSVSIEVEANGVLY 386
            +LEPL T +T+KLHP++EL  LC  +SY+I +  V+  DG     +EVEA+G+++
Sbjct: 1305 LLEPLVTPETLKLHPIRELNELCQKRSYKIILEDVSRKDGLTYYRMEVEADGIIH 1359


>ref|XP_003534774.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Glycine max]
          Length = 1421

 Score =  392 bits (1008), Expect = e-107
 Identities = 200/360 (55%), Positives = 266/360 (73%), Gaps = 2/360 (0%)
 Frame = -2

Query: 1441 QQLFRRNEYHDEGLLSTQREKMISNNALCKLGCERKLQGFIRYECFNPKHWVIPGDLPKC 1262
            QQLF+  + H EGLLS +REK+ISN ALCKLGC   L GFIR E F+P  W IPGD P+ 
Sbjct: 1041 QQLFKTYKNHHEGLLSVKREKIISNAALCKLGCSSGLPGFIRNEPFDPHAWTIPGDKPES 1100

Query: 1261 SRLDEFPLLTSGKIYIQGSRLMKSKVVADVVEGLIGAYLIEGGELAALVFMDWLGLKIDF 1082
             +L+E  ++   KIY+ G R +  K++ADVVE LIGA+L  GGE++AL+FMDW+G+K+ F
Sbjct: 1101 LKLEEL-VIKGKKIYVHGKRKLNRKIIADVVEALIGAFLSTGGEISALLFMDWVGIKVSF 1159

Query: 1081 VKEIPNDRQFTLQPERLVNVDQLETLLKYHFIDPSLLLEALTHGSYQLPEILRCYQRLEF 902
             K IP +R F +QPE+L+NV  LE+ LKY F D SLL+EALTHGSY LPE+ RCYQRLEF
Sbjct: 1160 DK-IPYERHFDIQPEKLLNVRFLESQLKYSFHDHSLLVEALTHGSYMLPEVPRCYQRLEF 1218

Query: 901  LGDSVLDYLITFYMYTKYPGIAPGQLTDLRSSAVNNDCYALAAVKXXXXXXXXXXXXXXH 722
            LGDSVLDYLIT+++Y +YPG++PGQLTD+R+++VNNDCYA +A+K              H
Sbjct: 1219 LGDSVLDYLITWHLYNEYPGMSPGQLTDMRAASVNNDCYAWSAIKHGLHKHVLHASQELH 1278

Query: 721  EHVENFVESVGKLSFQSTCGWESDTTVPKVLGDVIESLAGAILVDSGY-KEIVWECIIPI 545
            +H+   + +  KLS  ST G+ES+ + PKVLGD+IESLAGAILVDSG+ KE+VW+ I P+
Sbjct: 1279 KHIAVTLNNFDKLSSSSTFGYESEASPPKVLGDIIESLAGAILVDSGFNKEVVWQSIRPL 1338

Query: 544  LEPLATLDTMKLHPVKELEALCLSKSYEIQI-SVTSVDGNPSVSIEVEANGVLYSDTRTG 368
            LEPL T +T+KLHP++EL  LC  +SY+I +  V+  DG  +  ++VEA+GV++    TG
Sbjct: 1339 LEPLVTPETLKLHPIRELNELCQKRSYKIVLEDVSRKDGVTNYRMKVEADGVIHEYEYTG 1398


>ref|XP_002269915.2| PREDICTED: endoribonuclease Dicer homolog 2-like [Vitis vinifera]
          Length = 1394

 Score =  390 bits (1002), Expect = e-106
 Identities = 210/382 (54%), Positives = 267/382 (69%), Gaps = 1/382 (0%)
 Frame = -2

Query: 1441 QQLFRRNEYHDEGLLSTQREKMISNNALCKLGCERKLQGFIRYECFNPKHWVIPGDLPKC 1262
            QQLF+  + H EGLLS ++E++ISN +LCKLGC+RKL GFIR E F+PK W+I GD  + 
Sbjct: 1011 QQLFKTFQNHHEGLLSVKKERIISNASLCKLGCDRKLPGFIRNESFDPKKWIIAGDQSRS 1070

Query: 1261 SRLDEFPLLTSGKIYIQGSRLMKSKVVADVVEGLIGAYLIEGGELAALVFMDWLGLKIDF 1082
                E  L ++ KIY+   R +KSK +ADVVE LIGA+L  GGE AAL+FM WLG+ +DF
Sbjct: 1071 HVFGEELLSSTRKIYVSERRKLKSKRIADVVEALIGAFLSTGGETAALIFMRWLGINVDF 1130

Query: 1081 VKEIPNDRQFTLQPERLVNVDQLETLLKYHFIDPSLLLEALTHGSYQLPEILRCYQRLEF 902
            VK +P  R F +  +R VNV  LE++L Y F DPSLL+EALTHGSY LPEI RCYQRLEF
Sbjct: 1131 VK-VPYKRDFPVILKRHVNVSYLESILNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEF 1189

Query: 901  LGDSVLDYLITFYMYTKYPGIAPGQLTDLRSSAVNNDCYALAAVKXXXXXXXXXXXXXXH 722
            LGD+VLDYL+T ++Y KYPG++PG LTDLRS++VNNDCYA +AVK              H
Sbjct: 1190 LGDAVLDYLMTMHLYHKYPGMSPGLLTDLRSASVNNDCYAQSAVKAKLHQHILHSSQELH 1249

Query: 721  EHVENFVESVGKLSFQSTCGWESDTTVPKVLGDVIESLAGAILVDSGY-KEIVWECIIPI 545
             H+   V +  KL  +ST GWES+++ PKVLGDVIESLAGAILVDS Y KE+V++ I P+
Sbjct: 1250 RHIVVTVGNFDKLPVESTFGWESESSFPKVLGDVIESLAGAILVDSDYNKEVVFQSIRPL 1309

Query: 544  LEPLATLDTMKLHPVKELEALCLSKSYEIQISVTSVDGNPSVSIEVEANGVLYSDTRTGM 365
            LEPL T +T+KLHP +EL  LC  + Y+I+  V S +G  SV+IEVEANG  +  T T  
Sbjct: 1310 LEPLITPETVKLHPARELGELCQKEHYDIKRVVVSQNGKASVTIEVEANGAKHKHTSTS- 1368

Query: 364  NXXXXXXXXXXTVLEKLKASMA 299
            +           VL+ LK S+A
Sbjct: 1369 DKRTATKLASKEVLKSLKESIA 1390


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