BLASTX nr result

ID: Cimicifuga21_contig00015338 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015338
         (1159 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29503.3| unnamed protein product [Vitis vinifera]              253   8e-65
ref|XP_002531465.1| conserved hypothetical protein [Ricinus comm...   247   5e-63
ref|XP_002304294.1| predicted protein [Populus trichocarpa] gi|2...   246   1e-62
ref|XP_002326661.1| predicted protein [Populus trichocarpa] gi|2...   233   7e-59
emb|CAN81597.1| hypothetical protein VITISV_039396 [Vitis vinifera]   201   4e-49

>emb|CBI29503.3| unnamed protein product [Vitis vinifera]
          Length = 386

 Score =  253 bits (645), Expect = 8e-65
 Identities = 157/323 (48%), Positives = 192/323 (59%), Gaps = 20/323 (6%)
 Frame = +3

Query: 210  ENQKNPSKFNSHFLCKALSVAIVLVILPLFPSQAPDFINQTVFTRSWELLHLLFVGIAVS 389
            +NQ NPSKF S FL KAL V + L ILPLFPSQAP+FINQTVF RSWELLHL+FVGIAVS
Sbjct: 9    QNQANPSKFYSGFLYKALIVTLFLAILPLFPSQAPEFINQTVFNRSWELLHLVFVGIAVS 68

Query: 390  YGLFSRRNVESEKENQLKIDATQTYMSRILQVSSVFDDEAETPLGSDENKTQTWNSKYFR 569
            YGLFSRRN E+EKEN  K D  Q+Y+SR LQVSSVFD+E E+P GS E+K QTWNS+Y+R
Sbjct: 69   YGLFSRRNDETEKENHSKFDNAQSYVSRFLQVSSVFDEEVESPSGSGESKVQTWNSQYYR 128

Query: 570  RTPLVVVEKDNPVLDEESATVSNVSNKPLFLPVRSLRXXXXXXXXXXXXXXXXXXXXXXX 749
              P+VVV +++ V+DE+S+  S +  KPL LPVRSL+                       
Sbjct: 129  GKPVVVVTQESSVIDEQSSKGSRIGEKPLLLPVRSLK----------------------- 165

Query: 750  XXXXXXXXXXXXXXERTRIR--EFGD-----LEEKLKESVVLPSPIPWRSRSGRMEMKEE 908
                           R+ I+  E GD     LE+KL+++VVLPSPIPWRSRSGRMEMKEE
Sbjct: 166  -SRVSDPGSKRFSINRSTIKNGELGDLEPLELEKKLEQNVVLPSPIPWRSRSGRMEMKEE 224

Query: 909  VGDCNPP-------------PYALPPSVDEPEFDQPEFRSIPSPVHASSWPNXXXXXXXX 1049
            V   +PP             P  L PS   P F  P+  S+ SP  +S            
Sbjct: 225  VD--SPPLSGSSHASSVSSSPKKLSPS---PSFSSPKKPSL-SPSLSS------------ 266

Query: 1050 XXXXXXXXXEMRARNVEDMGKKK 1118
                     E +A++VED  +KK
Sbjct: 267  ---------ESQAKSVEDFARKK 280


>ref|XP_002531465.1| conserved hypothetical protein [Ricinus communis]
           gi|223528919|gb|EEF30915.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 565

 Score =  247 bits (630), Expect = 5e-63
 Identities = 144/286 (50%), Positives = 180/286 (62%), Gaps = 13/286 (4%)
 Frame = +3

Query: 156 EDTDYSQLEEMPSQRLVLENQKNPSKFNSHFLCKALSVAIVLVILPLFPSQAPDFINQTV 335
           ++T Y    +  +Q     N  NPSKF SHFL KAL V I LVILPLFPSQAP+FINQT+
Sbjct: 3   DNTTYYTKHQQQNQA---NNNNNPSKFYSHFLYKALIVTIFLVILPLFPSQAPEFINQTL 59

Query: 336 FTRSWELLHLLFVGIAVSYGLFSRRNVESEKEN--QLKIDATQTYMSRILQVSSVFDDEA 509
            TR WE LHL+FVGIAVSYGLFSRRN E+EK+N    K D  Q+Y+SR LQVSSVFDD+A
Sbjct: 60  NTRGWEFLHLIFVGIAVSYGLFSRRNDETEKDNSSNSKFDNAQSYVSRFLQVSSVFDDDA 119

Query: 510 ETPLGSD---ENKTQTWNSKYFRRTPLVVV-EKDNPVLDEES-ATVSNVSNKPLFLPVRS 674
           ++P  SD       QTWN++Y+R  P+VVV E+ +P  D+E  +T S +  KPL LP+RS
Sbjct: 120 DSPSKSDVSNSTSVQTWNNQYYRNEPVVVVAEEQHPAFDQEQRSTGSRIGEKPLLLPIRS 179

Query: 675 LRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERTRIREFG-----DLEEKLK 839
           L+                                      ++R  EFG     DLEEK+K
Sbjct: 180 LK-SRVLDADGNEISKESISSVSASISRTNSNLGSKRFSSKSRNGEFGGLQHQDLEEKIK 238

Query: 840 ESVVLPSPIPWRSRSGRMEMKEEVGDCNPPP-YALPPSVDEPEFDQ 974
           ++VVLPSPIPWRSRSGRMEMKE   + + PP Y LPPS++E EF++
Sbjct: 239 DNVVLPSPIPWRSRSGRMEMKEAKEETDSPPLYTLPPSMEESEFNR 284


>ref|XP_002304294.1| predicted protein [Populus trichocarpa] gi|222841726|gb|EEE79273.1|
            predicted protein [Populus trichocarpa]
          Length = 580

 Score =  246 bits (627), Expect = 1e-62
 Identities = 138/280 (49%), Positives = 174/280 (62%), Gaps = 11/280 (3%)
 Frame = +3

Query: 210  ENQKNPSKFNSHFLCKALSVAIVLVILPLFPSQAPDFINQTVFTRSWELLHLLFVGIAVS 389
            + Q NP+K+ +HFL KAL V + L+ILPLFPSQAP+FINQT+ TR WE LHL+FVGIAVS
Sbjct: 13   QKQANPTKYYTHFLYKALIVTVFLIILPLFPSQAPEFINQTLNTRGWEFLHLVFVGIAVS 72

Query: 390  YGLFSRRNVESEKE-----NQLKIDATQTYMSRILQVSSVFDDEAETPLGSDENKTQTWN 554
            YGLFS+RN E+EKE     NQ K D  Q+Y+SR LQVSSVFDD+ ++   S E K QTW+
Sbjct: 73   YGLFSKRNDETEKENNNSSNQSKFDNAQSYVSRFLQVSSVFDDDVDSSPKSGETKVQTWS 132

Query: 555  SKYFRRTPLVVVEKDNPVLD-EESATVSNVSNKPLFLPVRSLRXXXXXXXXXXXXXXXXX 731
            ++Y+R  P+VVV + N VLD E+ AT S +  KPL LPVRSL+                 
Sbjct: 133  NQYYRNDPVVVVAEQNSVLDKEQRATSSRIGEKPLLLPVRSLKSRVIAADVDETGKESTG 192

Query: 732  XXXXXXXXXXXXXXXXXXXXERTRIREFG-----DLEEKLKESVVLPSPIPWRSRSGRME 896
                                 + +  EFG     +LEEKLK +VVLPSPIPWRSRSGRME
Sbjct: 193  RSASISRSNSTGSKTFSSNSSKQKGGEFGGWDCLELEEKLKGNVVLPSPIPWRSRSGRME 252

Query: 897  MKEEVGDCNPPPYALPPSVDEPEFDQPEFRSIPSPVHASS 1016
            M+EE    + PPY LPPS +E E+++     +P      S
Sbjct: 253  MREE---ADIPPYNLPPSSEEFEYNRSFNSQVPRSARTGS 289


>ref|XP_002326661.1| predicted protein [Populus trichocarpa] gi|222833983|gb|EEE72460.1|
            predicted protein [Populus trichocarpa]
          Length = 563

 Score =  233 bits (594), Expect = 7e-59
 Identities = 142/325 (43%), Positives = 188/325 (57%), Gaps = 18/325 (5%)
 Frame = +3

Query: 216  QKNPSKFNSHFLCKALSVAIVLVILPLFPSQAPDFINQTVFTRSWELLHLLFVGIAVSYG 395
            Q NP+K+ ++FL KAL V I L+IL LFPSQAP+F+NQT+ TR WE L L+FVGIAVSYG
Sbjct: 15   QANPTKYYTNFLYKALIVTIFLIILQLFPSQAPEFLNQTLNTRGWEFLRLVFVGIAVSYG 74

Query: 396  LFSRRNVESEKE----NQLKIDATQTYMSRILQVSSVFDDEAETPLGSDENKTQTWNSKY 563
            LFSRRN E+EKE    N  + D  Q+Y+SR LQVSSVFDDE ++P  S+E K QTW+++Y
Sbjct: 75   LFSRRNDETEKEINNSNPSRFDNAQSYVSRFLQVSSVFDDEVDSPPESEETKVQTWSNQY 134

Query: 564  FRRTPLVVVEKDNPVLD-EESATVSNVSNKPLFLPVRSLR-XXXXXXXXXXXXXXXXXXX 737
            +R  P+VVV + N  LD E+ AT S +  KPL LPVRSL+                    
Sbjct: 135  YRNDPVVVVAEQNSALDKEQRATSSRIGEKPLLLPVRSLKSRVIDADVDETCKEYAGGSA 194

Query: 738  XXXXXXXXXXXXXXXXXXERTRIREFG-----DLEEKLKESVVLPSPIPWRSRSGRMEMK 902
                               + +  E G     +LEEKLKE+ VLPSPIPWRSRSGRMEMK
Sbjct: 195  SISRSNSDSGSKRFSSNSSKNKSGESGGSYCQELEEKLKENFVLPSPIPWRSRSGRMEMK 254

Query: 903  EEVGDCNPPPYALPPSVDEPEFDQPEFRSIPSPVHASS-------WPNXXXXXXXXXXXX 1061
            EE    + P Y+LPPS+++ E+++     +P    + S        P+            
Sbjct: 255  EE---ADSPLYSLPPSLEKSEYNRSFNSQVPQSARSISATSSPKLSPSPSFSSPKKFSPS 311

Query: 1062 XXXXXEMRARNVEDMGKKKKNAYKS 1136
                 E+  ++VED   +KK+ Y+S
Sbjct: 312  PSFSSEVLGKSVEDF-VRKKSIYRS 335


>emb|CAN81597.1| hypothetical protein VITISV_039396 [Vitis vinifera]
          Length = 909

 Score =  201 bits (510), Expect = 4e-49
 Identities = 129/363 (35%), Positives = 178/363 (49%), Gaps = 56/363 (15%)
 Frame = +3

Query: 219  KNPSKFNSHFLCKALSVAIVLVILPLFPSQAPDFINQTVFTRSWELLHLLFVGIAVSYGL 398
            + PSK  +HFLCK+L  A+ LV++PLFPSQAP++IN T+ T+ WELLHLLF+GIAVSYG+
Sbjct: 14   RTPSKSCTHFLCKSLIFALFLVVIPLFPSQAPEYINHTLITKFWELLHLLFIGIAVSYGV 73

Query: 399  FSRRNVESEKENQLKIDATQTYMSRILQVSSVFDDEAETPLGSDENKT------------ 542
            FSRRNV+   E+   +D +++Y SR   VSS+F+D  E   GS E               
Sbjct: 74   FSRRNVDRGIESHSTVDNSESYASRFXHVSSIFEDGFENSCGSGEKSVIQTWNSQHFQGE 133

Query: 543  ---------------------------------------QTWNSKYFRRTPLVVVEKDNP 605
                                                   QTW+S+YFR   +VVV K + 
Sbjct: 134  SMVVVTSGSSVLDKRGXPRSSNFENGCENLFESDRKKVIQTWDSQYFRGETMVVVAKGSY 193

Query: 606  VLDEESATVSNVSNKPLFLPVRSLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 785
             LD+     S+V +KPL LPVR+L+                                   
Sbjct: 194  ALDQWGKPESSVDDKPLGLPVRNLKSRIKDTDSTESVSGSRSKSSSKTGSSKSSG----- 248

Query: 786  XXERTRIREFG-----DLEEKLKESVVLPSPIPWRSRSGRMEMKEEVGDCNPPPYALPPS 950
               + R  +FG      LEE+LK++V LPSPIPWRSRSGRMEM+EE    +   +++PPS
Sbjct: 249  ---KVRNGKFGKLGPLKLEEQLKDTVALPSPIPWRSRSGRMEMREEADSFHSHSHSMPPS 305

Query: 951  VDEPEFDQPEFRSIPSPVHASSWPNXXXXXXXXXXXXXXXXXEMRARNVEDMGKKKKNAY 1130
             +EPEF+Q + RS  S    SS  +                 E+    +E++G  +K+ Y
Sbjct: 306  FEEPEFEQLQSRSFRSSTPYSSQASSVSSSPRKLSPSSSASSELGNSKMEELG-GRKSPY 364

Query: 1131 KSS 1139
             SS
Sbjct: 365  GSS 367


Top