BLASTX nr result

ID: Cimicifuga21_contig00015306 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015306
         (1510 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19516.3| unnamed protein product [Vitis vinifera]              152   2e-34
ref|XP_002327142.1| predicted protein [Populus trichocarpa] gi|2...   148   3e-33
emb|CAN75496.1| hypothetical protein VITISV_040890 [Vitis vinifera]   147   6e-33
ref|XP_003631670.1| PREDICTED: uncharacterized protein LOC100854...   137   6e-30
ref|XP_002301183.1| predicted protein [Populus trichocarpa] gi|2...   132   3e-28

>emb|CBI19516.3| unnamed protein product [Vitis vinifera]
          Length = 255

 Score =  152 bits (385), Expect = 2e-34
 Identities = 92/241 (38%), Positives = 134/241 (55%), Gaps = 4/241 (1%)
 Frame = +2

Query: 170 RSQISELNSRISKDLAVGSMSREWTNEKHSSYLNSMEASFVRRLHNHKYHSMDILGQHSR 349
           + + S L+S +++      MS EWT+EKHS YL SMEASFV +L+N    S+ +LG HS+
Sbjct: 23  QEETSSLDSPVTEP-----MSMEWTDEKHSLYLKSMEASFVDQLYN----SLGLLGWHSQ 73

Query: 350 LYNLQDTNMSLQSNANNLKPSSQFKVLQSGCWKKINFEPAQPKSSTADESRVLLENQWIR 529
             N  D+  SLQ        S QFKVL+ G W+KINFE A+ +   AD S VLL N WI+
Sbjct: 74  KENPSDSKPSLQMLCKTRNSSGQFKVLRGGFWQKINFERARKQMVKADGSHVLLANPWIQ 133

Query: 530 RFRYPDKQQEFAMPNLPESGAQSSESIHSGGQKLEHCGAVDRQKAASYGARMHSKKLHAD 709
            FR   + +   +P   E+G+ + +++ S G+K   CG               SK+    
Sbjct: 134 HFRSACRDETVVLPAPQENGSSTRKAVPSRGKKASPCGLATT-----------SKQFPMY 182

Query: 710 YSHQRDQDYVSSNAEVSDQNFVDED----KAENHGRAKKTKTETTDVLITDQVVPLRKFS 877
           + H R +D +S+N EVSDQNF+D+D    +  +   AK+ KT   D  + DQVVP  + +
Sbjct: 183 HCHLRQRDSLSTNTEVSDQNFLDDDVEGGRENSLVSAKRMKTIVVDTCVNDQVVPSHRHT 242

Query: 878 M 880
           +
Sbjct: 243 V 243


>ref|XP_002327142.1| predicted protein [Populus trichocarpa] gi|222835457|gb|EEE73892.1|
           predicted protein [Populus trichocarpa]
          Length = 254

 Score =  148 bits (374), Expect = 3e-33
 Identities = 99/240 (41%), Positives = 128/240 (53%), Gaps = 10/240 (4%)
 Frame = +2

Query: 173 SQISELNSRISKDLA------VGSMSREWTNEKHSSYLNSMEASFVRRLHNHKYHSMDIL 334
           S+ SEL    S +LA      + SM+ EWT+EKH+ YL SMEASFV +LHN    SMD+L
Sbjct: 13  SETSELTGYESGELAQQDSPVIASMASEWTDEKHNLYLKSMEASFVNQLHN----SMDLL 68

Query: 335 GQHSRLYNLQDTNMSLQSNANNLKPSSQFKVLQSGCWKKINFEPAQPKSSTADESRVLLE 514
           G  S L      N+S + N     PS +FKV + G W+KINF   + + S+A ESR  L 
Sbjct: 69  GWRS-LKEGSVPNLSREVNCRTCTPSGEFKVHRRGNWQKINFRRPESQISSAKESRGFLT 127

Query: 515 NQWIRRFRYPDKQQEFAMPNLPESGAQSSESIHSGGQKLEHCGAVDRQKAASYGARMHSK 694
           + WI+ F    K ++ A P L E   QS  +I +G + +  C A+             SK
Sbjct: 128 SPWIQHFTSARKPEDVASPTLQECANQSRATISNGKKAMLCCPAIS------------SK 175

Query: 695 KLHADYSHQRDQDYVSSNAEVSDQNFVDED----KAENHGRAKKTKTETTDVLITDQVVP 862
             H   S     D V SN E+SDQNFVDED    KA +   +KK KT  TD   +DQVVP
Sbjct: 176 HYHLSNSFSYHHDLVDSNTEMSDQNFVDEDIKGEKASSSLSSKKMKTLKTDASGSDQVVP 235


>emb|CAN75496.1| hypothetical protein VITISV_040890 [Vitis vinifera]
          Length = 467

 Score =  147 bits (372), Expect = 6e-33
 Identities = 96/264 (36%), Positives = 138/264 (52%), Gaps = 16/264 (6%)
 Frame = +2

Query: 170 RSQISELNSRISKDLAVGSMSREWTNEKHSSYLNSMEASFVRRLHNHKYHSMDILGQHSR 349
           + + S L+S +++      MS EWT+EKHS YL SMEASFV +L+N    S  +LG HS+
Sbjct: 23  QEETSSLDSPVTEP-----MSMEWTDEKHSLYLKSMEASFVDQLYN----SXGLLGWHSQ 73

Query: 350 LYNLQDTNMSLQSNANNLKPSSQFKVLQSGCWKKINFEPAQPKSSTADESRVLLENQWIR 529
             N  D+  SLQ        S QFKVL+ G W+KINFE A+ +   AD S VLL N WI+
Sbjct: 74  KENPSDSKPSLQMLCKTRNSSGQFKVLRGGFWQKINFERARKQMVKADGSHVLLANPWIQ 133

Query: 530 RFRYPDKQQEFAMPNLPESGAQSSESIHSGGQKLEHCGAVDRQKAASYGARMHSKKLHAD 709
            FR   + +   +P   E+G+ + +++ S G+K   CG               SK+    
Sbjct: 134 HFRSACRDETVVLPAPQENGSSTRKAVPSRGKKASPCGLATT-----------SKQFPMY 182

Query: 710 YSHQRDQDYVSSNAEVSDQNFVDED----KAENHGRAKKTKTETTDVLITDQV------- 856
           + H R +D +S+N EVSDQNF+D+D    +  +   AK+ KT   D  + DQ        
Sbjct: 183 HCHLRQRDSLSTNTEVSDQNFLDDDVEGGRENSLVSAKRMKTIVVDTCVNDQTYCHWRCH 242

Query: 857 -----VPLRKFSMNEIQAYARKGY 913
                  L K S+N+ QA  + G+
Sbjct: 243 YEQCPCRLMKDSINDCQASNKAGF 266


>ref|XP_003631670.1| PREDICTED: uncharacterized protein LOC100854716 [Vitis vinifera]
           gi|147795291|emb|CAN64989.1| hypothetical protein
           VITISV_001771 [Vitis vinifera]
           gi|297741273|emb|CBI32404.3| unnamed protein product
           [Vitis vinifera]
          Length = 302

 Score =  137 bits (346), Expect = 6e-30
 Identities = 99/266 (37%), Positives = 131/266 (49%), Gaps = 11/266 (4%)
 Frame = +2

Query: 116 PSLDRVAIEQCGENQILMRSQISELNSRISKDL------AVGSMSREWTNEKHSSYLNSM 277
           P+ D    E CG       S +S      SK        A    + EWT+EKHS YL+S+
Sbjct: 12  PASDLAGTEGCGSAVTRGSSDLSASTVDGSKACLRSNGDARSGQTTEWTDEKHSLYLDSL 71

Query: 278 EASFVRRLHNHKYHSMDILGQHSRLYNLQDTNMSLQSNANNLKPSSQFKVLQSGCWKKIN 457
           E+SFV +LH+    SM + G+ S++  + + N   +   N    S ++ VLQ GCW+K N
Sbjct: 72  ESSFVNQLHS----SMGLFGRRSKV-KMMELNSFQELAVNAYNSSDEYTVLQDGCWRKRN 126

Query: 458 FEPAQPKSSTADESRVLLENQWIRRFRYPDKQQEFAMPNLPESGAQSSESIHSGGQKLEH 637
           F   Q  S  A ESR +LEN WI  F+   +Q +    +L      SS+ IH  G     
Sbjct: 127 FGRHQLLSDAAAESRDILENPWICHFKSAGQQHDVTSSDLWNRSVDSSKGIHLRG----- 181

Query: 638 CGAVDRQKAASYGARMHSKKLHADYSHQRDQDYVSSNAEVSDQNFVDED---KAENHGRA 808
                 ++ AS+G    SK+L A   H   QD V    EVSDQNF+DED   K+    RA
Sbjct: 182 ------KRKASHGLATSSKRLSA--CHPWLQDSVGGITEVSDQNFIDEDQENKSSRVSRA 233

Query: 809 K--KTKTETTDVLITDQVVPLRKFSM 880
           K  KTK +T D   TDQ VP  KF M
Sbjct: 234 KKLKTKADTVDATNTDQCVPSGKFLM 259


>ref|XP_002301183.1| predicted protein [Populus trichocarpa] gi|222842909|gb|EEE80456.1|
           predicted protein [Populus trichocarpa]
          Length = 256

 Score =  132 bits (331), Expect = 3e-28
 Identities = 96/255 (37%), Positives = 134/255 (52%), Gaps = 10/255 (3%)
 Frame = +2

Query: 152 ENQILMRSQISELNSRISKDLA------VGSMSREWTNEKHSSYLNSMEASFVRRLHNHK 313
           E++   RS+ S L    S +LA      + SMS EWT+EKH  YL SMEASFV +L+N  
Sbjct: 9   ESESRTRSETSGLTGHESVELAQQDSPMIESMSSEWTDEKHKLYLKSMEASFVNQLYN-- 66

Query: 314 YHSMDILGQHSRLYNLQDTNMSLQSNANNLKPSSQFKVLQSGCWKKINFEPAQPKSSTAD 493
             S+D+LG  S+       N+S + N +  +PS QFKVL+ G W+KINF   + + S+A 
Sbjct: 67  --SIDLLGWRSQK-GRPVPNLSGEVNCSTCRPSGQFKVLRRGGWQKINFRRHESQLSSAK 123

Query: 494 ESRVLLENQWIRRFRYPDKQQEFAMPNLPESGAQSSESIHSGGQKLEHCGAVDRQKAASY 673
           +SR  L + WI++F    K +    P L E   Q S  I+   +K   C      K + +
Sbjct: 124 DSRGYLTSPWIQQFTPARKPEGATSPALQECAIQ-SRGINLKWKKAVLCCPATNSKLSHF 182

Query: 674 GARMHSKKLHADYSHQRDQDYVSSNAEVSDQNFVDED----KAENHGRAKKTKTETTDVL 841
           G   +S   H        +D+V SN E+S QNFVDED     A +   +K+ KT  TD  
Sbjct: 183 G---NSFSCH--------RDFVESNTEMSGQNFVDEDIESESASSSFSSKRLKTLKTDPS 231

Query: 842 ITDQVVPLRKFSMNE 886
            +DQVVP  K  + E
Sbjct: 232 SSDQVVPHSKTPVEE 246


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