BLASTX nr result

ID: Cimicifuga21_contig00015303 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015303
         (1521 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282151.1| PREDICTED: WD repeat-containing protein 85 i...   515   e-143
ref|XP_002282140.1| PREDICTED: WD repeat-containing protein 85 i...   513   e-143
ref|XP_002282158.2| PREDICTED: WD repeat-containing protein 85 i...   509   e-142
emb|CBI15004.3| unnamed protein product [Vitis vinifera]              488   e-135
ref|XP_003617841.1| WD repeat-containing protein [Medicago trunc...   479   e-133

>ref|XP_002282151.1| PREDICTED: WD repeat-containing protein 85 isoform 2 [Vitis vinifera]
          Length = 353

 Score =  515 bits (1327), Expect = e-143
 Identities = 242/346 (69%), Positives = 281/346 (81%), Gaps = 7/346 (2%)
 Frame = -2

Query: 1346 RMDVAHCYLDGNVDAVEFCPHDSFHHVLAASTYTLQEGDHPSRSGSISLYSVDADKGNLD 1167
            RMDVAHCYL+GN DAVEFCPHDS+HHVLAASTYTLQEGD PSRSGS+SL+++DA+ G L+
Sbjct: 4    RMDVAHCYLEGNADAVEFCPHDSYHHVLAASTYTLQEGDQPSRSGSVSLFNIDAEFGRLE 63

Query: 1166 LFYHVETVGIFDIKWNPVGTDVVPLLAQADADGYFRVXXXXXXXXXXXXXXXXXXEVAEE 987
            L + V+T GIFDIKW+P G+  VP LAQADADGY R+                  E+  E
Sbjct: 64   LGHRVDTAGIFDIKWSPAGSTAVPSLAQADADGYLRLYGLESGSSGAEALGGSLTEINAE 123

Query: 986  KVSSSMCLCLDWNPSATSISVGLSDGSISIITIKESELNIQQTWVAHDFELWATSFDTHQ 807
            K+SSSMCL LDWNPSAT ISVGLSDGSISII+++ES+L+I Q W AH+FELW+TSFD HQ
Sbjct: 124  KISSSMCLFLDWNPSATCISVGLSDGSISIISLRESQLDICQEWKAHEFELWSTSFDIHQ 183

Query: 806  PQLVYTGSDDCRFSCWDLRESPSTLAFQNTKTHKMGICCIAKSPTDPNKLLTGSYDEHLR 627
            PQLVYTGSDDC+FSCWDLR+SPS LAFQN+K HKMG+CCIAKSP+DPN +LTGSYDEHLR
Sbjct: 184  PQLVYTGSDDCKFSCWDLRDSPSKLAFQNSKVHKMGVCCIAKSPSDPNLVLTGSYDEHLR 243

Query: 626  VWDVRSISKPISENSICLGGGVWRIKHHPLIPGLTLAACMHNGFAIVNTDRDNVVLMETF 447
            +WDVRSI KP++E SICLGGGVWRIKHHP +PGL LAACMHNGFA+V T  +   ++ET+
Sbjct: 244  LWDVRSIIKPVNETSICLGGGVWRIKHHPSVPGLVLAACMHNGFAVVKTKGEEPEVIETY 303

Query: 446  GKHNSLAYGADWQRGPKKR-------SVVATCSFYDRLLRVWMPET 330
             KH SLAYGADWQRG   R       SVVATCSFYDRLLR+W  E+
Sbjct: 304  SKHESLAYGADWQRGDLCRKGQNNGGSVVATCSFYDRLLRIWTTES 349


>ref|XP_002282140.1| PREDICTED: WD repeat-containing protein 85 isoform 1 [Vitis vinifera]
          Length = 349

 Score =  513 bits (1322), Expect = e-143
 Identities = 241/345 (69%), Positives = 280/345 (81%), Gaps = 7/345 (2%)
 Frame = -2

Query: 1343 MDVAHCYLDGNVDAVEFCPHDSFHHVLAASTYTLQEGDHPSRSGSISLYSVDADKGNLDL 1164
            MDVAHCYL+GN DAVEFCPHDS+HHVLAASTYTLQEGD PSRSGS+SL+++DA+ G L+L
Sbjct: 1    MDVAHCYLEGNADAVEFCPHDSYHHVLAASTYTLQEGDQPSRSGSVSLFNIDAEFGRLEL 60

Query: 1163 FYHVETVGIFDIKWNPVGTDVVPLLAQADADGYFRVXXXXXXXXXXXXXXXXXXEVAEEK 984
             + V+T GIFDIKW+P G+  VP LAQADADGY R+                  E+  EK
Sbjct: 61   GHRVDTAGIFDIKWSPAGSTAVPSLAQADADGYLRLYGLESGSSGAEALGGSLTEINAEK 120

Query: 983  VSSSMCLCLDWNPSATSISVGLSDGSISIITIKESELNIQQTWVAHDFELWATSFDTHQP 804
            +SSSMCL LDWNPSAT ISVGLSDGSISII+++ES+L+I Q W AH+FELW+TSFD HQP
Sbjct: 121  ISSSMCLFLDWNPSATCISVGLSDGSISIISLRESQLDICQEWKAHEFELWSTSFDIHQP 180

Query: 803  QLVYTGSDDCRFSCWDLRESPSTLAFQNTKTHKMGICCIAKSPTDPNKLLTGSYDEHLRV 624
            QLVYTGSDDC+FSCWDLR+SPS LAFQN+K HKMG+CCIAKSP+DPN +LTGSYDEHLR+
Sbjct: 181  QLVYTGSDDCKFSCWDLRDSPSKLAFQNSKVHKMGVCCIAKSPSDPNLVLTGSYDEHLRL 240

Query: 623  WDVRSISKPISENSICLGGGVWRIKHHPLIPGLTLAACMHNGFAIVNTDRDNVVLMETFG 444
            WDVRSI KP++E SICLGGGVWRIKHHP +PGL LAACMHNGFA+V T  +   ++ET+ 
Sbjct: 241  WDVRSIIKPVNETSICLGGGVWRIKHHPSVPGLVLAACMHNGFAVVKTKGEEPEVIETYS 300

Query: 443  KHNSLAYGADWQRGPKKR-------SVVATCSFYDRLLRVWMPET 330
            KH SLAYGADWQRG   R       SVVATCSFYDRLLR+W  E+
Sbjct: 301  KHESLAYGADWQRGDLCRKGQNNGGSVVATCSFYDRLLRIWTTES 345


>ref|XP_002282158.2| PREDICTED: WD repeat-containing protein 85 isoform 3 [Vitis vinifera]
          Length = 341

 Score =  509 bits (1311), Expect = e-142
 Identities = 240/345 (69%), Positives = 279/345 (80%), Gaps = 7/345 (2%)
 Frame = -2

Query: 1343 MDVAHCYLDGNVDAVEFCPHDSFHHVLAASTYTLQEGDHPSRSGSISLYSVDADKGNLDL 1164
            MDVAHCYL+GN DAVEFCPHDS+HHVLAASTYTLQEGD PSRSGS+SL+++DA+ G L+L
Sbjct: 1    MDVAHCYLEGNADAVEFCPHDSYHHVLAASTYTLQEGDQPSRSGSVSLFNIDAEFGRLEL 60

Query: 1163 FYHVETVGIFDIKWNPVGTDVVPLLAQADADGYFRVXXXXXXXXXXXXXXXXXXEVAEEK 984
             + V+T GIFDIKW+P G+  VP LAQADADGY R+                   +  EK
Sbjct: 61   GHRVDTAGIFDIKWSPAGSTAVPSLAQADADGYLRLYGLESGGSLTE--------INAEK 112

Query: 983  VSSSMCLCLDWNPSATSISVGLSDGSISIITIKESELNIQQTWVAHDFELWATSFDTHQP 804
            +SSSMCL LDWNPSAT ISVGLSDGSISII+++ES+L+I Q W AH+FELW+TSFD HQP
Sbjct: 113  ISSSMCLFLDWNPSATCISVGLSDGSISIISLRESQLDICQEWKAHEFELWSTSFDIHQP 172

Query: 803  QLVYTGSDDCRFSCWDLRESPSTLAFQNTKTHKMGICCIAKSPTDPNKLLTGSYDEHLRV 624
            QLVYTGSDDC+FSCWDLR+SPS LAFQN+K HKMG+CCIAKSP+DPN +LTGSYDEHLR+
Sbjct: 173  QLVYTGSDDCKFSCWDLRDSPSKLAFQNSKVHKMGVCCIAKSPSDPNLVLTGSYDEHLRL 232

Query: 623  WDVRSISKPISENSICLGGGVWRIKHHPLIPGLTLAACMHNGFAIVNTDRDNVVLMETFG 444
            WDVRSI KP++E SICLGGGVWRIKHHP +PGL LAACMHNGFA+V T  +   ++ET+ 
Sbjct: 233  WDVRSIIKPVNETSICLGGGVWRIKHHPSVPGLVLAACMHNGFAVVKTKGEEPEVIETYS 292

Query: 443  KHNSLAYGADWQRGPKKR-------SVVATCSFYDRLLRVWMPET 330
            KH SLAYGADWQRG   R       SVVATCSFYDRLLR+W  E+
Sbjct: 293  KHESLAYGADWQRGDLCRKGQNNGGSVVATCSFYDRLLRIWTTES 337


>emb|CBI15004.3| unnamed protein product [Vitis vinifera]
          Length = 1255

 Score =  488 bits (1257), Expect = e-135
 Identities = 225/315 (71%), Positives = 262/315 (83%)
 Frame = -2

Query: 1346 RMDVAHCYLDGNVDAVEFCPHDSFHHVLAASTYTLQEGDHPSRSGSISLYSVDADKGNLD 1167
            RMDVAHCYL+GN DAVEFCPHDS+HHVLAASTYTLQEGD PSRSGS+SL+++DA+ G L+
Sbjct: 4    RMDVAHCYLEGNADAVEFCPHDSYHHVLAASTYTLQEGDQPSRSGSVSLFNIDAEFGRLE 63

Query: 1166 LFYHVETVGIFDIKWNPVGTDVVPLLAQADADGYFRVXXXXXXXXXXXXXXXXXXEVAEE 987
            L + V+T GIFDIKW+P G+  VP LAQADADGY R+                  E+  E
Sbjct: 64   LGHRVDTAGIFDIKWSPAGSTAVPSLAQADADGYLRLYGLESGSSGAEALGGSLTEINAE 123

Query: 986  KVSSSMCLCLDWNPSATSISVGLSDGSISIITIKESELNIQQTWVAHDFELWATSFDTHQ 807
            K+SSSMCL LDWNPSAT ISVGLSDGSISII+++ES+L+I Q W AH+FELW+TSFD HQ
Sbjct: 124  KISSSMCLFLDWNPSATCISVGLSDGSISIISLRESQLDICQEWKAHEFELWSTSFDIHQ 183

Query: 806  PQLVYTGSDDCRFSCWDLRESPSTLAFQNTKTHKMGICCIAKSPTDPNKLLTGSYDEHLR 627
            PQLVYTGSDDC+FSCWDLR+SPS LAFQN+K HKMG+CCIAKSP+DPN +LTGSYDEHLR
Sbjct: 184  PQLVYTGSDDCKFSCWDLRDSPSKLAFQNSKVHKMGVCCIAKSPSDPNLVLTGSYDEHLR 243

Query: 626  VWDVRSISKPISENSICLGGGVWRIKHHPLIPGLTLAACMHNGFAIVNTDRDNVVLMETF 447
            +WDVRSI KP++E SICLGGGVWRIKHHP +PGL LAACMHNGFA+V T  +   ++ET+
Sbjct: 244  LWDVRSIIKPVNETSICLGGGVWRIKHHPSVPGLVLAACMHNGFAVVKTKGEEPEVIETY 303

Query: 446  GKHNSLAYGADWQRG 402
             KH SLAYGADWQRG
Sbjct: 304  SKHESLAYGADWQRG 318


>ref|XP_003617841.1| WD repeat-containing protein [Medicago truncatula]
            gi|355519176|gb|AET00800.1| WD repeat-containing protein
            [Medicago truncatula]
          Length = 421

 Score =  479 bits (1233), Expect = e-133
 Identities = 227/352 (64%), Positives = 264/352 (75%), Gaps = 6/352 (1%)
 Frame = -2

Query: 1349 IRMDVAHCYLDGNVDAVEFCPHDSFHHVLAASTYTLQEGDHPSRSGSISLYSVDADKGNL 1170
            + MDVAHCYL+GN DAVEFCPHD  H+VLAASTYTLQEGD PSRSGSISL+++DAD G  
Sbjct: 72   VSMDVAHCYLEGNADAVEFCPHDRHHNVLAASTYTLQEGDQPSRSGSISLFNIDADTGKF 131

Query: 1169 DLFYHVETVGIFDIKWNPVGTDVVPLLAQADADGYFRVXXXXXXXXXXXXXXXXXXEVAE 990
            D  Y  ET GIFDIKWNP   ++ P L QADADGY R+                   +  
Sbjct: 132  DTVYSEETSGIFDIKWNPPAGNISPFLGQADADGYLRIKMLDGCSDGIQGANLKE--ITS 189

Query: 989  EKVSSSMCLCLDWNPSATSISVGLSDGSISIITIKESELNIQQTWVAHDFELWATSFDTH 810
            EKVS+SMCL LDWNP++TSI+VGLSDGS+SI+++ ES+L IQ+ W AHDFELW TSFD H
Sbjct: 190  EKVSNSMCLYLDWNPASTSITVGLSDGSVSIVSLHESKLEIQEEWKAHDFELWTTSFDIH 249

Query: 809  QPQLVYTGSDDCRFSCWDLRESPSTLAFQNTKTHKMGICCIAKSPTDPNKLLTGSYDEHL 630
            QP LVYTGSDDC+F CWDLR+SPS L F+N+K HKMG+ CI KSP DPN LLTGSYDE L
Sbjct: 250  QPNLVYTGSDDCKFCCWDLRDSPSKLVFKNSKVHKMGVTCIEKSPHDPNTLLTGSYDEFL 309

Query: 629  RVWDVRSISKPISENSICLGGGVWRIKHHPLIPGLTLAACMHNGFAIVNTDRDNVVLMET 450
            RVWD+RSISKP++E SI LGGGVWR+KHHP I GL LAACMHNGFAIV    D   ++ET
Sbjct: 310  RVWDLRSISKPVNETSISLGGGVWRVKHHPFIQGLVLAACMHNGFAIVAIKGDKAEVLET 369

Query: 449  FGKHNSLAYGADWQRGP------KKRSVVATCSFYDRLLRVWMPETGSNTTL 312
            + KH+SLAYGADWQ+G         + VVATCSFYD+L+RVW P    N  L
Sbjct: 370  YKKHDSLAYGADWQKGEANHTKGSSKPVVATCSFYDKLVRVWRPCNDINIVL 421


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