BLASTX nr result

ID: Cimicifuga21_contig00015300 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015300
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280236.2| PREDICTED: 5'-3' exoribonuclease 3-like [Vit...   205   3e-51
emb|CBI19841.3| unnamed protein product [Vitis vinifera]              205   3e-51
ref|XP_004171370.1| PREDICTED: 5'-3' exoribonuclease 3-like [Cuc...   201   7e-50
ref|XP_004143781.1| PREDICTED: 5'-3' exoribonuclease 3-like [Cuc...   201   7e-50
ref|XP_002510514.1| 5'->3' exoribonuclease, putative [Ricinus co...   200   1e-49

>ref|XP_002280236.2| PREDICTED: 5'-3' exoribonuclease 3-like [Vitis vinifera]
          Length = 1065

 Score =  205 bits (522), Expect = 3e-51
 Identities = 96/103 (93%), Positives = 101/103 (98%)
 Frame = +3

Query: 3   RKLPPKKESQVCDSNVITPGTEFMAVLSAALQYYVHLRLNNDPGWRSIKVILSDANVPGE 182
           RKLPPK++SQVCDSNVITPGTEFM VLS ALQYY+HLRLNNDPGW+SIKVILSDANVPGE
Sbjct: 144 RKLPPKQQSQVCDSNVITPGTEFMGVLSVALQYYIHLRLNNDPGWKSIKVILSDANVPGE 203

Query: 183 GEHKIMSYIRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEV 311
           GEHKIMSYIRLQRNLPG+DPNTRHCLYGLDADLIMLALATHEV
Sbjct: 204 GEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLALATHEV 246


>emb|CBI19841.3| unnamed protein product [Vitis vinifera]
          Length = 870

 Score =  205 bits (522), Expect = 3e-51
 Identities = 96/103 (93%), Positives = 101/103 (98%)
 Frame = +3

Query: 3   RKLPPKKESQVCDSNVITPGTEFMAVLSAALQYYVHLRLNNDPGWRSIKVILSDANVPGE 182
           RKLPPK++SQVCDSNVITPGTEFM VLS ALQYY+HLRLNNDPGW+SIKVILSDANVPGE
Sbjct: 144 RKLPPKQQSQVCDSNVITPGTEFMGVLSVALQYYIHLRLNNDPGWKSIKVILSDANVPGE 203

Query: 183 GEHKIMSYIRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEV 311
           GEHKIMSYIRLQRNLPG+DPNTRHCLYGLDADLIMLALATHEV
Sbjct: 204 GEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLALATHEV 246


>ref|XP_004171370.1| PREDICTED: 5'-3' exoribonuclease 3-like [Cucumis sativus]
          Length = 373

 Score =  201 bits (510), Expect = 7e-50
 Identities = 95/103 (92%), Positives = 101/103 (98%)
 Frame = +3

Query: 3   RKLPPKKESQVCDSNVITPGTEFMAVLSAALQYYVHLRLNNDPGWRSIKVILSDANVPGE 182
           RKLPPK+ESQV DSNVITPGT+FMAVLS ALQYYVH+RLNNDPGW++IKVILSDANVPGE
Sbjct: 144 RKLPPKEESQVFDSNVITPGTDFMAVLSIALQYYVHIRLNNDPGWKNIKVILSDANVPGE 203

Query: 183 GEHKIMSYIRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEV 311
           GEHKIMSYIRLQRNLPG+DPNTRHCLYGLDADLIMLALATHEV
Sbjct: 204 GEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLALATHEV 246


>ref|XP_004143781.1| PREDICTED: 5'-3' exoribonuclease 3-like [Cucumis sativus]
          Length = 1101

 Score =  201 bits (510), Expect = 7e-50
 Identities = 95/103 (92%), Positives = 101/103 (98%)
 Frame = +3

Query: 3   RKLPPKKESQVCDSNVITPGTEFMAVLSAALQYYVHLRLNNDPGWRSIKVILSDANVPGE 182
           RKLPPK+ESQV DSNVITPGT+FMAVLS ALQYYVH+RLNNDPGW++IKVILSDANVPGE
Sbjct: 144 RKLPPKEESQVFDSNVITPGTDFMAVLSIALQYYVHIRLNNDPGWKNIKVILSDANVPGE 203

Query: 183 GEHKIMSYIRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEV 311
           GEHKIMSYIRLQRNLPG+DPNTRHCLYGLDADLIMLALATHEV
Sbjct: 204 GEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLALATHEV 246


>ref|XP_002510514.1| 5'->3' exoribonuclease, putative [Ricinus communis]
           gi|223551215|gb|EEF52701.1| 5'->3' exoribonuclease,
           putative [Ricinus communis]
          Length = 1113

 Score =  200 bits (508), Expect = 1e-49
 Identities = 92/103 (89%), Positives = 99/103 (96%)
 Frame = +3

Query: 3   RKLPPKKESQVCDSNVITPGTEFMAVLSAALQYYVHLRLNNDPGWRSIKVILSDANVPGE 182
           RKLPPK+ SQV DSN+ITPGTEFMAVLS ALQYY+HLRLNNDPGW+ +KVILSDANVPGE
Sbjct: 144 RKLPPKESSQVFDSNIITPGTEFMAVLSIALQYYIHLRLNNDPGWKKVKVILSDANVPGE 203

Query: 183 GEHKIMSYIRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEV 311
           GEHK+MSYIRLQRNLPGYDPNTRHCLYGLDADLIMLALATHE+
Sbjct: 204 GEHKVMSYIRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEI 246


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