BLASTX nr result

ID: Cimicifuga21_contig00015286 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015286
         (924 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281732.1| PREDICTED: U3 small nucleolar ribonucleoprot...   300   3e-79
ref|XP_003536456.1| PREDICTED: U3 small nucleolar ribonucleoprot...   293   3e-77
ref|XP_002525943.1| U3 small nucleolar ribonucleoprotein protein...   291   2e-76
ref|XP_004153543.1| PREDICTED: U3 small nucleolar ribonucleoprot...   286   6e-75
ref|XP_003630714.1| U3 small nucleolar ribonucleoprotein IMP3 [M...   285   1e-74

>ref|XP_002281732.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP3 [Vitis
           vinifera] gi|298204446|emb|CBI16926.3| unnamed protein
           product [Vitis vinifera]
          Length = 182

 Score =  300 bits (768), Expect = 3e-79
 Identities = 140/168 (83%), Positives = 160/168 (95%)
 Frame = -2

Query: 767 VDFLQWKREGGHREALIMQRYHVTGRDDYKKYSGICRMVQKLVNILKHMNAQDPFRIKMT 588
           V+FL+WKREGGHREA +M RYHVTGRDDYKKYSG+CRMVQKLVNILK M+ +DPFRI+MT
Sbjct: 15  VNFLEWKREGGHREAHVMHRYHVTGRDDYKKYSGLCRMVQKLVNILKQMDPRDPFRIEMT 74

Query: 587 DSLLEKLYNMGVIPQKKSLALCDKLGVSSFCKRRLSTVMVKLKFAEQLREAVTYIEQGHI 408
           D LLEKLYN+GVIP +KSLALCD+L VSSFC+RRLSTV+V+LKFAE L+EAVTYIEQGHI
Sbjct: 75  DMLLEKLYNIGVIPTRKSLALCDRLAVSSFCRRRLSTVLVRLKFAEHLKEAVTYIEQGHI 134

Query: 407 RVGPDTITDPAYLVTRNMEDFVTWVDSSKIKRRVLEYNDRLDDYDAMN 264
           RVGPDT+TDPA+LVTRN+EDFVTWVDSSKIKR+VL+YN+RLDDYDAMN
Sbjct: 135 RVGPDTVTDPAFLVTRNLEDFVTWVDSSKIKRKVLQYNERLDDYDAMN 182


>ref|XP_003536456.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP3-like
           [Glycine max] gi|356575988|ref|XP_003556117.1|
           PREDICTED: U3 small nucleolar ribonucleoprotein protein
           IMP3-like [Glycine max] gi|255637789|gb|ACU19216.1|
           unknown [Glycine max]
          Length = 182

 Score =  293 bits (751), Expect = 3e-77
 Identities = 136/168 (80%), Positives = 157/168 (93%)
 Frame = -2

Query: 767 VDFLQWKREGGHREALIMQRYHVTGRDDYKKYSGICRMVQKLVNILKHMNAQDPFRIKMT 588
           V+FL+WKREGGHRE LIMQRYHVTGRDDYKKYSG+C MVQKLVNILK M+ +DPFR+ MT
Sbjct: 15  VNFLEWKREGGHRENLIMQRYHVTGRDDYKKYSGLCHMVQKLVNILKQMDPKDPFRVDMT 74

Query: 587 DSLLEKLYNMGVIPQKKSLALCDKLGVSSFCKRRLSTVMVKLKFAEQLREAVTYIEQGHI 408
           D LLEKLYNMGVIP ++S+ LC++L VSSFC+RRLSTV+V+LKFAE L+EAVTYIEQGHI
Sbjct: 75  DKLLEKLYNMGVIPTRQSITLCERLTVSSFCRRRLSTVLVRLKFAEHLKEAVTYIEQGHI 134

Query: 407 RVGPDTITDPAYLVTRNMEDFVTWVDSSKIKRRVLEYNDRLDDYDAMN 264
           RVGP+T+TDPA+LVTRNMEDFVTWVDSSKIKR+VL+YND+LDDYD MN
Sbjct: 135 RVGPETVTDPAFLVTRNMEDFVTWVDSSKIKRKVLQYNDKLDDYDLMN 182


>ref|XP_002525943.1| U3 small nucleolar ribonucleoprotein protein IMP3, putative
           [Ricinus communis] gi|223534772|gb|EEF36463.1| U3 small
           nucleolar ribonucleoprotein protein IMP3, putative
           [Ricinus communis]
          Length = 182

 Score =  291 bits (744), Expect = 2e-76
 Identities = 134/168 (79%), Positives = 157/168 (93%)
 Frame = -2

Query: 767 VDFLQWKREGGHREALIMQRYHVTGRDDYKKYSGICRMVQKLVNILKHMNAQDPFRIKMT 588
           V+FL WKREG HREA +MQRYH+  RDDYKKYSGICRMVQKLVNILK M+ +DP+R++MT
Sbjct: 15  VNFLLWKREGDHREAKVMQRYHIVDRDDYKKYSGICRMVQKLVNILKQMDPRDPYRVEMT 74

Query: 587 DSLLEKLYNMGVIPQKKSLALCDKLGVSSFCKRRLSTVMVKLKFAEQLREAVTYIEQGHI 408
           D LLEKLYNMGVIP +KSLALCD+L VSSFC+RRLSTV+++LKFAE L+EA+TYIEQGHI
Sbjct: 75  DILLEKLYNMGVIPSRKSLALCDRLSVSSFCRRRLSTVLMRLKFAEHLKEAITYIEQGHI 134

Query: 407 RVGPDTITDPAYLVTRNMEDFVTWVDSSKIKRRVLEYNDRLDDYDAMN 264
           RVGP+T+TDPA+LVTRNMEDFVTWVD+SKIKR+VLEYN++LDDYDAMN
Sbjct: 135 RVGPETVTDPAFLVTRNMEDFVTWVDTSKIKRKVLEYNEKLDDYDAMN 182


>ref|XP_004153543.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP3-like
           [Cucumis sativus] gi|449476409|ref|XP_004154729.1|
           PREDICTED: U3 small nucleolar ribonucleoprotein protein
           IMP3-like [Cucumis sativus]
          Length = 183

 Score =  286 bits (731), Expect = 6e-75
 Identities = 130/168 (77%), Positives = 156/168 (92%)
 Frame = -2

Query: 767 VDFLQWKREGGHREALIMQRYHVTGRDDYKKYSGICRMVQKLVNILKHMNAQDPFRIKMT 588
           V+FL+WKREGGHREA +M RYH+TGRDDYKKYS +CR VQKLV +LK MN +DPFR+++T
Sbjct: 15  VNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVTMLKKMNEKDPFRLELT 74

Query: 587 DSLLEKLYNMGVIPQKKSLALCDKLGVSSFCKRRLSTVMVKLKFAEQLREAVTYIEQGHI 408
           + LLEKLYNMGVIP ++SL LCD+L VSSFC+RRLSTV+V+LKFAE LREAVTYIEQGHI
Sbjct: 75  EKLLEKLYNMGVIPTRQSLNLCDRLSVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHI 134

Query: 407 RVGPDTITDPAYLVTRNMEDFVTWVDSSKIKRRVLEYNDRLDDYDAMN 264
           RVGP+T+TDPA+LVTRNMEDF+TWVDSSKIKR++L+YND+LDDYDA+N
Sbjct: 135 RVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKILQYNDQLDDYDAIN 182


>ref|XP_003630714.1| U3 small nucleolar ribonucleoprotein IMP3 [Medicago truncatula]
           gi|217075252|gb|ACJ85986.1| unknown [Medicago
           truncatula] gi|355524736|gb|AET05190.1| U3 small
           nucleolar ribonucleoprotein IMP3 [Medicago truncatula]
           gi|388502894|gb|AFK39513.1| unknown [Medicago
           truncatula]
          Length = 182

 Score =  285 bits (729), Expect = 1e-74
 Identities = 131/168 (77%), Positives = 154/168 (91%)
 Frame = -2

Query: 767 VDFLQWKREGGHREALIMQRYHVTGRDDYKKYSGICRMVQKLVNILKHMNAQDPFRIKMT 588
           V+FL+WKREGGHRE ++MQRYHVTGRDDYKKYS ICRMVQKLVN +K M+ +DPFR+ MT
Sbjct: 15  VNFLEWKREGGHRENMVMQRYHVTGRDDYKKYSSICRMVQKLVNTVKQMDPKDPFRVDMT 74

Query: 587 DSLLEKLYNMGVIPQKKSLALCDKLGVSSFCKRRLSTVMVKLKFAEQLREAVTYIEQGHI 408
           D LLEKLYNMGVI  ++S+ LC++L VS+FC+RRLSTV+VKLKFAE L+EAVTYIEQGH+
Sbjct: 75  DKLLEKLYNMGVISTRQSITLCERLTVSAFCRRRLSTVLVKLKFAEHLKEAVTYIEQGHV 134

Query: 407 RVGPDTITDPAYLVTRNMEDFVTWVDSSKIKRRVLEYNDRLDDYDAMN 264
           RVGP+TITDPAYLVTRNMED +TWVDSSKIKR+VL+YND+LDDYD MN
Sbjct: 135 RVGPNTITDPAYLVTRNMEDLITWVDSSKIKRKVLQYNDKLDDYDLMN 182


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