BLASTX nr result

ID: Cimicifuga21_contig00015271 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015271
         (567 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK94105.1| unknown [Populus trichocarpa]                           47   1e-07
ref|XP_002329620.1| predicted protein [Populus trichocarpa] gi|2...    47   1e-07
ref|XP_002511962.1| Aspartic proteinase nepenthesin-1 precursor,...    48   2e-07
ref|XP_003534178.1| PREDICTED: aspartic proteinase nepenthesin-1...    47   2e-07
ref|XP_002529147.1| Aspartic proteinase nepenthesin-1 precursor,...    46   1e-06

>gb|ABK94105.1| unknown [Populus trichocarpa]
          Length = 499

 Score = 47.0 bits (110), Expect(2) = 1e-07
 Identities = 19/34 (55%), Positives = 23/34 (67%)
 Frame = +2

Query: 284 FIPVTCDSQPCQELAWSSCNTNTCGYKVHYGDGS 385
           + PVTC SQ C  L  SSC +  C Y+V+YGDGS
Sbjct: 211 YAPVTCQSQQCSSLEMSSCRSGQCLYQVNYGDGS 244



 Score = 33.9 bits (76), Expect(2) = 1e-07
 Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
 Frame = +1

Query: 136 GEYFAQFRFSTLPKQIY-TN*YWQ*CQWIQCSPCKGCYSQTD 258
           GEYF +       +Q Y          W+QC PC  CY QTD
Sbjct: 159 GEYFTRVGVGNPARQFYMVLDTGSDINWLQCQPCTDCYQQTD 200


>ref|XP_002329620.1| predicted protein [Populus trichocarpa] gi|222870359|gb|EEF07490.1|
           predicted protein [Populus trichocarpa]
          Length = 357

 Score = 47.0 bits (110), Expect(2) = 1e-07
 Identities = 19/34 (55%), Positives = 23/34 (67%)
 Frame = +2

Query: 284 FIPVTCDSQPCQELAWSSCNTNTCGYKVHYGDGS 385
           + PVTC SQ C  L  SSC +  C Y+V+YGDGS
Sbjct: 70  YAPVTCQSQQCSSLEMSSCRSGQCLYQVNYGDGS 103



 Score = 33.9 bits (76), Expect(2) = 1e-07
 Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
 Frame = +1

Query: 136 GEYFAQFRFSTLPKQIY-TN*YWQ*CQWIQCSPCKGCYSQTD 258
           GEYF +       +Q Y          W+QC PC  CY QTD
Sbjct: 18  GEYFTRVGVGNPARQFYMVLDTGSDINWLQCQPCTDCYQQTD 59


>ref|XP_002511962.1| Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus
           communis] gi|223549142|gb|EEF50631.1| Aspartic
           proteinase nepenthesin-1 precursor, putative [Ricinus
           communis]
          Length = 495

 Score = 48.1 bits (113), Expect(2) = 2e-07
 Identities = 19/34 (55%), Positives = 23/34 (67%)
 Frame = +2

Query: 284 FIPVTCDSQPCQELAWSSCNTNTCGYKVHYGDGS 385
           + P+TCDSQ C  L  SSC    C Y+V+YGDGS
Sbjct: 209 YSPLTCDSQQCNSLQMSSCRNGQCRYQVNYGDGS 242



 Score = 32.3 bits (72), Expect(2) = 2e-07
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = +1

Query: 214 WIQCSPCKGCYSQTD 258
           WIQC PC  CY Q+D
Sbjct: 184 WIQCQPCSDCYQQSD 198


>ref|XP_003534178.1| PREDICTED: aspartic proteinase nepenthesin-1-like [Glycine max]
          Length = 492

 Score = 46.6 bits (109), Expect(3) = 2e-07
 Identities = 18/32 (56%), Positives = 23/32 (71%)
 Frame = +2

Query: 290 PVTCDSQPCQELAWSSCNTNTCGYKVHYGDGS 385
           P+TCD+Q CQ+L  S+C    C Y+V YGDGS
Sbjct: 209 PLTCDAQQCQDLEMSACRNGKCLYQVSYGDGS 240



 Score = 31.6 bits (70), Expect(3) = 2e-07
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +1

Query: 214 WIQCSPCKGCYSQTD 258
           W+QC PC  CY Q+D
Sbjct: 182 WLQCKPCSDCYQQSD 196



 Score = 21.2 bits (43), Expect(3) = 2e-07
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +3

Query: 246 QSN*SIFDPSESSSY 290
           Q +  IFDP+ SSSY
Sbjct: 193 QQSDPIFDPTASSSY 207


>ref|XP_002529147.1| Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus
           communis] gi|223531426|gb|EEF33260.1| Aspartic
           proteinase nepenthesin-1 precursor, putative [Ricinus
           communis]
          Length = 479

 Score = 46.2 bits (108), Expect(2) = 1e-06
 Identities = 18/34 (52%), Positives = 24/34 (70%)
 Frame = +2

Query: 284 FIPVTCDSQPCQELAWSSCNTNTCGYKVHYGDGS 385
           + P++CD++ CQ L  S C  NTC Y+V YGDGS
Sbjct: 194 YSPLSCDTKQCQSLDVSECRNNTCLYEVSYGDGS 227



 Score = 31.6 bits (70), Expect(2) = 1e-06
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = +1

Query: 214 WIQCSPCKGCYSQTD 258
           WIQC+PC  CY Q D
Sbjct: 169 WIQCAPCADCYHQAD 183


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