BLASTX nr result

ID: Cimicifuga21_contig00015269 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015269
         (850 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135834.1| PREDICTED: probable histone H2A variant 3-li...   206   5e-51
ref|NP_001237008.1| uncharacterized protein LOC100306322 [Glycin...   205   9e-51
gb|ABK22002.1| unknown [Picea sitchensis]                             204   2e-50
ref|XP_002307619.1| histone 2 [Populus trichocarpa] gi|118486969...   204   3e-50
ref|XP_002300810.1| histone 2 [Populus trichocarpa] gi|118482024...   204   3e-50

>ref|XP_004135834.1| PREDICTED: probable histone H2A variant 3-like [Cucumis sativus]
           gi|449519192|ref|XP_004166619.1| PREDICTED: probable
           histone H2A variant 3-like [Cucumis sativus]
          Length = 134

 Score =  206 bits (524), Expect = 5e-51
 Identities = 104/110 (94%), Positives = 109/110 (99%)
 Frame = -2

Query: 663 RPVSRSSRAGLQFPVGRIHRHLKSRIAANGRVGATAAVYSAAILEYLTAEVLELAGNASK 484
           +PVSRSSRAGLQFPVGR+HR LKSR+AANGRVGATAAVY+AAILEYLTAEVLELAGNASK
Sbjct: 25  KPVSRSSRAGLQFPVGRVHRQLKSRVAANGRVGATAAVYTAAILEYLTAEVLELAGNASK 84

Query: 483 DLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKSTKE 334
           DLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKS+KE
Sbjct: 85  DLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKSSKE 134


>ref|NP_001237008.1| uncharacterized protein LOC100306322 [Glycine max]
           gi|255628199|gb|ACU14444.1| unknown [Glycine max]
          Length = 136

 Score =  205 bits (522), Expect = 9e-51
 Identities = 105/110 (95%), Positives = 109/110 (99%)
 Frame = -2

Query: 663 RPVSRSSRAGLQFPVGRIHRHLKSRIAANGRVGATAAVYSAAILEYLTAEVLELAGNASK 484
           +PVSRSSRAGLQFPVGRIHR LKSR++ANGRVGATAAVYSAAILEYLTAEVLELAGNASK
Sbjct: 27  KPVSRSSRAGLQFPVGRIHRLLKSRVSANGRVGATAAVYSAAILEYLTAEVLELAGNASK 86

Query: 483 DLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKSTKE 334
           DLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKS+KE
Sbjct: 87  DLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKSSKE 136


>gb|ABK22002.1| unknown [Picea sitchensis]
          Length = 145

 Score =  204 bits (520), Expect = 2e-50
 Identities = 105/110 (95%), Positives = 109/110 (99%)
 Frame = -2

Query: 663 RPVSRSSRAGLQFPVGRIHRHLKSRIAANGRVGATAAVYSAAILEYLTAEVLELAGNASK 484
           +PVSRSSRAGLQFPVGRIHR LKSRI+ANGRVGATAAVYSAAILEYLTAEVLELAGNASK
Sbjct: 36  KPVSRSSRAGLQFPVGRIHRLLKSRISANGRVGATAAVYSAAILEYLTAEVLELAGNASK 95

Query: 483 DLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKSTKE 334
           DLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKS+K+
Sbjct: 96  DLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKSSKD 145


>ref|XP_002307619.1| histone 2 [Populus trichocarpa] gi|118486969|gb|ABK95317.1| unknown
           [Populus trichocarpa] gi|222857068|gb|EEE94615.1|
           histone 2 [Populus trichocarpa]
          Length = 139

 Score =  204 bits (518), Expect = 3e-50
 Identities = 103/110 (93%), Positives = 108/110 (98%)
 Frame = -2

Query: 663 RPVSRSSRAGLQFPVGRIHRHLKSRIAANGRVGATAAVYSAAILEYLTAEVLELAGNASK 484
           RPVSRSSRAG+QFPVGRIHRHLK RI+A+GRVGATAAVY A+ILEYLTAEVLELAGNASK
Sbjct: 30  RPVSRSSRAGIQFPVGRIHRHLKQRISAHGRVGATAAVYLASILEYLTAEVLELAGNASK 89

Query: 483 DLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKSTKE 334
           DLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK+TKE
Sbjct: 90  DLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKTTKE 139


>ref|XP_002300810.1| histone 2 [Populus trichocarpa] gi|118482024|gb|ABK92943.1| unknown
           [Populus trichocarpa] gi|222842536|gb|EEE80083.1|
           histone 2 [Populus trichocarpa]
          Length = 137

 Score =  204 bits (518), Expect = 3e-50
 Identities = 103/110 (93%), Positives = 108/110 (98%)
 Frame = -2

Query: 663 RPVSRSSRAGLQFPVGRIHRHLKSRIAANGRVGATAAVYSAAILEYLTAEVLELAGNASK 484
           RPVSRSSRAG+QFPVGRIHRHLK RI+A+GRVGATAAVY A+ILEYLTAEVLELAGNASK
Sbjct: 28  RPVSRSSRAGIQFPVGRIHRHLKQRISAHGRVGATAAVYLASILEYLTAEVLELAGNASK 87

Query: 483 DLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKSTKE 334
           DLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK+TKE
Sbjct: 88  DLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKTTKE 137


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