BLASTX nr result

ID: Cimicifuga21_contig00015260 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015260
         (551 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283798.1| PREDICTED: nuclear pore complex protein Nup8...   147   8e-34
ref|XP_002516506.1| conserved hypothetical protein [Ricinus comm...   139   4e-31
ref|XP_004148390.1| PREDICTED: nuclear pore complex protein Nup8...   132   3e-29
gb|AAK32793.1|AF361625_1 AT4g32910/F26P21_30 [Arabidopsis thalia...   132   5e-29
ref|XP_003550123.1| PREDICTED: nuclear pore complex protein Nup8...   132   5e-29

>ref|XP_002283798.1| PREDICTED: nuclear pore complex protein Nup85 [Vitis vinifera]
           gi|296081842|emb|CBI20847.3| unnamed protein product
           [Vitis vinifera]
          Length = 715

 Score =  147 bits (372), Expect = 8e-34
 Identities = 74/90 (82%), Positives = 82/90 (91%)
 Frame = +2

Query: 2   AVESLILLMRSPSTPQRFWLPLLHDSLMLLNWREGPLLNVAQTNLLLNKLQDWSIGRLRP 181
           AVESLI LMR+PSTPQRFWLPLLHDSL LL+W+E PLLN  QTNLLLNKLQ+ S+ RLRP
Sbjct: 626 AVESLISLMRNPSTPQRFWLPLLHDSLKLLSWQERPLLNANQTNLLLNKLQELSMARLRP 685

Query: 182 DYCEADLPPQALSSVRLALATNLGKAILEE 271
           D+ EA+LPPQALSSVRLALATNLG+AILEE
Sbjct: 686 DFIEANLPPQALSSVRLALATNLGRAILEE 715


>ref|XP_002516506.1| conserved hypothetical protein [Ricinus communis]
           gi|223544326|gb|EEF45847.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 725

 Score =  139 bits (349), Expect = 4e-31
 Identities = 69/90 (76%), Positives = 78/90 (86%)
 Frame = +2

Query: 2   AVESLILLMRSPSTPQRFWLPLLHDSLMLLNWREGPLLNVAQTNLLLNKLQDWSIGRLRP 181
           A ESL+ LM+SPSTPQRFWLPLL+DSL LL+W E PLLNV+QTNLLLNKLQ+ S+ RL P
Sbjct: 635 AAESLLSLMKSPSTPQRFWLPLLNDSLKLLSWEERPLLNVSQTNLLLNKLQELSMARLHP 694

Query: 182 DYCEADLPPQALSSVRLALATNLGKAILEE 271
           D  EAD PPQ L+SVRLALATNLG+AILEE
Sbjct: 695 DSVEADFPPQTLNSVRLALATNLGRAILEE 724


>ref|XP_004148390.1| PREDICTED: nuclear pore complex protein Nup85-like [Cucumis
           sativus] gi|449507257|ref|XP_004162978.1| PREDICTED:
           nuclear pore complex protein Nup85-like [Cucumis
           sativus]
          Length = 720

 Score =  132 bits (333), Expect = 3e-29
 Identities = 63/89 (70%), Positives = 77/89 (86%)
 Frame = +2

Query: 2   AVESLILLMRSPSTPQRFWLPLLHDSLMLLNWREGPLLNVAQTNLLLNKLQDWSIGRLRP 181
           AV+SLI LM++PSTPQRFWLP+L+DSL L++W  GPLLN  QTNLLLNKLQ+ S+ +LRP
Sbjct: 630 AVDSLIALMKNPSTPQRFWLPILNDSLKLIDWHGGPLLNTEQTNLLLNKLQELSMAKLRP 689

Query: 182 DYCEADLPPQALSSVRLALATNLGKAILE 268
           D+ E+DLPP ALSS+RLALA NLG+A LE
Sbjct: 690 DFVESDLPPLALSSIRLALAKNLGRAFLE 718


>gb|AAK32793.1|AF361625_1 AT4g32910/F26P21_30 [Arabidopsis thaliana]
           gi|25090220|gb|AAN72255.1| At4g32910/F26P21_30
           [Arabidopsis thaliana]
          Length = 713

 Score =  132 bits (331), Expect = 5e-29
 Identities = 66/90 (73%), Positives = 75/90 (83%)
 Frame = +2

Query: 2   AVESLILLMRSPSTPQRFWLPLLHDSLMLLNWREGPLLNVAQTNLLLNKLQDWSIGRLRP 181
           AVE L+ LM+SPSTPQRFWLPLLHDSL LLNW E  LLNV QTNL+LNKLQ+ SI RLRP
Sbjct: 623 AVERLVSLMKSPSTPQRFWLPLLHDSLKLLNWPERSLLNVTQTNLMLNKLQELSIARLRP 682

Query: 182 DYCEADLPPQALSSVRLALATNLGKAILEE 271
            + E++L  QA+ SVRLALATNLG+A LEE
Sbjct: 683 GFIESELSAQAVGSVRLALATNLGRAFLEE 712


>ref|XP_003550123.1| PREDICTED: nuclear pore complex protein Nup85-like [Glycine max]
          Length = 698

 Score =  132 bits (331), Expect = 5e-29
 Identities = 64/90 (71%), Positives = 79/90 (87%)
 Frame = +2

Query: 2   AVESLILLMRSPSTPQRFWLPLLHDSLMLLNWREGPLLNVAQTNLLLNKLQDWSIGRLRP 181
           AV SLILLM++PSTPQRFWLPLL+DSL LLNW++ PLL+V++TNLLLNKL + S+ +LRP
Sbjct: 609 AVGSLILLMKNPSTPQRFWLPLLYDSLKLLNWQDCPLLSVSETNLLLNKLHELSLAKLRP 668

Query: 182 DYCEADLPPQALSSVRLALATNLGKAILEE 271
            + E  LPP ALSS+RLALATNLG+AIL+E
Sbjct: 669 HHTEPSLPPDALSSIRLALATNLGQAILDE 698


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