BLASTX nr result

ID: Cimicifuga21_contig00015245 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015245
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278827.1| PREDICTED: zinc finger and SCAN domain-conta...    92   6e-17
emb|CBI32873.3| unnamed protein product [Vitis vinifera]               82   5e-14
ref|XP_002533583.1| zinc finger protein, putative [Ricinus commu...    82   6e-14
ref|NP_001234471.1| transcription factor IIIA [Solanum lycopersi...    82   6e-14
ref|XP_002327353.1| predicted protein [Populus trichocarpa] gi|2...    79   4e-13

>ref|XP_002278827.1| PREDICTED: zinc finger and SCAN domain-containing protein 10-like
           [Vitis vinifera]
          Length = 370

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 43/88 (48%), Positives = 50/88 (56%), Gaps = 5/88 (5%)
 Frame = -3

Query: 250 KRPPIFRDIRRYYCDYCGISRXXXXXXXXXXXXXXXXXXXXXXXXXETQ-----SNTCEE 86
           ++ PIFRD+RRY+CDYCG+ R                           +     SN CEE
Sbjct: 7   RKEPIFRDVRRYFCDYCGLCRSKKALIRAHMLSHHKEEMEGQKVHNNEEKEGEKSNACEE 66

Query: 85  CGVSFRKPAYLKQHMQSHSFERPFACPV 2
           CG SF+KPAYLKQHMQSHS ERPF CPV
Sbjct: 67  CGASFKKPAYLKQHMQSHSLERPFTCPV 94


>emb|CBI32873.3| unnamed protein product [Vitis vinifera]
          Length = 390

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 44/108 (40%), Positives = 51/108 (47%), Gaps = 25/108 (23%)
 Frame = -3

Query: 250 KRPPIFRDIRRYYCDYCGISRXXXXXXXXXXXXXXXXXXXXXXXXXETQ-----SNTCEE 86
           ++ PIFRD+RRY+CDYCG+ R                           +     SN CEE
Sbjct: 7   RKEPIFRDVRRYFCDYCGLCRSKKALIRAHMLSHHKEEMEGQKVHNNEEKEGEKSNACEE 66

Query: 85  CGVSFRKPAYLKQHMQSHS--------------------FERPFACPV 2
           CG SF+KPAYLKQHMQSHS                    FERPF CPV
Sbjct: 67  CGASFKKPAYLKQHMQSHSLEALNFFGSSIKRPQSRTTCFERPFTCPV 114


>ref|XP_002533583.1| zinc finger protein, putative [Ricinus communis]
           gi|223526542|gb|EEF28801.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 367

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 41/92 (44%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
 Frame = -3

Query: 262 AETSKRPPIFRDIRRYYCDYCGISRXXXXXXXXXXXXXXXXXXXXXXXXXETQ-----SN 98
           AE+    PIFRDIRRY+CDYCGI R                           +     SN
Sbjct: 5   AESEIPRPIFRDIRRYFCDYCGICRSKKSLITSHIQTHHKEEMNKDKSDEGVEADGVKSN 64

Query: 97  TCEECGVSFRKPAYLKQHMQSHSFERPFACPV 2
           TC ECG +F+K AYL+QHM+SHS ERP+ C V
Sbjct: 65  TCAECGANFKKAAYLRQHMRSHSLERPYVCSV 96


>ref|NP_001234471.1| transcription factor IIIA [Solanum lycopersicum]
           gi|115279797|gb|ABI85391.1| transcription factor IIIA
           [Solanum lycopersicum] gi|115279800|gb|ABI85393.1|
           transcription factor IIIA [Solanum lycopersicum]
          Length = 372

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 39/94 (41%), Positives = 50/94 (53%), Gaps = 5/94 (5%)
 Frame = -3

Query: 268 GEAETSKRPPIFRDIRRYYCDYCGISRXXXXXXXXXXXXXXXXXXXXXXXXXE-----TQ 104
           GE    KR  +FRDIRRYYC++CG+ R                               ++
Sbjct: 2   GEVGEEKREVVFRDIRRYYCEFCGLCRSKKSLISSHIQSHHQDVIESLKDDATENAKGSK 61

Query: 103 SNTCEECGVSFRKPAYLKQHMQSHSFERPFACPV 2
            N CEECG +F+KPA+LKQH+QSHS ERPF C +
Sbjct: 62  MNICEECGATFQKPAHLKQHLQSHSLERPFVCHI 95


>ref|XP_002327353.1| predicted protein [Populus trichocarpa] gi|222835723|gb|EEE74158.1|
           predicted protein [Populus trichocarpa]
          Length = 335

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 40/80 (50%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
 Frame = -3

Query: 232 RDIRRYYCDYCGISRXXXXXXXXXXXXXXXXXXXXXXXXXE-----TQSNTCEECGVSFR 68
           RDIRRYYCDYCGI R                         +      +SNTCE CG SF+
Sbjct: 1   RDIRRYYCDYCGICRSKKSLITSHVLTHHKEEMDEESVDGDEGKEGVKSNTCENCGASFK 60

Query: 67  KPAYLKQHMQSHSFERPFAC 8
           KPAYL QHMQSHS ERPF C
Sbjct: 61  KPAYLIQHMQSHSLERPFKC 80


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