BLASTX nr result
ID: Cimicifuga21_contig00015245
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00015245 (306 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002278827.1| PREDICTED: zinc finger and SCAN domain-conta... 92 6e-17 emb|CBI32873.3| unnamed protein product [Vitis vinifera] 82 5e-14 ref|XP_002533583.1| zinc finger protein, putative [Ricinus commu... 82 6e-14 ref|NP_001234471.1| transcription factor IIIA [Solanum lycopersi... 82 6e-14 ref|XP_002327353.1| predicted protein [Populus trichocarpa] gi|2... 79 4e-13 >ref|XP_002278827.1| PREDICTED: zinc finger and SCAN domain-containing protein 10-like [Vitis vinifera] Length = 370 Score = 91.7 bits (226), Expect = 6e-17 Identities = 43/88 (48%), Positives = 50/88 (56%), Gaps = 5/88 (5%) Frame = -3 Query: 250 KRPPIFRDIRRYYCDYCGISRXXXXXXXXXXXXXXXXXXXXXXXXXETQ-----SNTCEE 86 ++ PIFRD+RRY+CDYCG+ R + SN CEE Sbjct: 7 RKEPIFRDVRRYFCDYCGLCRSKKALIRAHMLSHHKEEMEGQKVHNNEEKEGEKSNACEE 66 Query: 85 CGVSFRKPAYLKQHMQSHSFERPFACPV 2 CG SF+KPAYLKQHMQSHS ERPF CPV Sbjct: 67 CGASFKKPAYLKQHMQSHSLERPFTCPV 94 >emb|CBI32873.3| unnamed protein product [Vitis vinifera] Length = 390 Score = 82.0 bits (201), Expect = 5e-14 Identities = 44/108 (40%), Positives = 51/108 (47%), Gaps = 25/108 (23%) Frame = -3 Query: 250 KRPPIFRDIRRYYCDYCGISRXXXXXXXXXXXXXXXXXXXXXXXXXETQ-----SNTCEE 86 ++ PIFRD+RRY+CDYCG+ R + SN CEE Sbjct: 7 RKEPIFRDVRRYFCDYCGLCRSKKALIRAHMLSHHKEEMEGQKVHNNEEKEGEKSNACEE 66 Query: 85 CGVSFRKPAYLKQHMQSHS--------------------FERPFACPV 2 CG SF+KPAYLKQHMQSHS FERPF CPV Sbjct: 67 CGASFKKPAYLKQHMQSHSLEALNFFGSSIKRPQSRTTCFERPFTCPV 114 >ref|XP_002533583.1| zinc finger protein, putative [Ricinus communis] gi|223526542|gb|EEF28801.1| zinc finger protein, putative [Ricinus communis] Length = 367 Score = 81.6 bits (200), Expect = 6e-14 Identities = 41/92 (44%), Positives = 49/92 (53%), Gaps = 5/92 (5%) Frame = -3 Query: 262 AETSKRPPIFRDIRRYYCDYCGISRXXXXXXXXXXXXXXXXXXXXXXXXXETQ-----SN 98 AE+ PIFRDIRRY+CDYCGI R + SN Sbjct: 5 AESEIPRPIFRDIRRYFCDYCGICRSKKSLITSHIQTHHKEEMNKDKSDEGVEADGVKSN 64 Query: 97 TCEECGVSFRKPAYLKQHMQSHSFERPFACPV 2 TC ECG +F+K AYL+QHM+SHS ERP+ C V Sbjct: 65 TCAECGANFKKAAYLRQHMRSHSLERPYVCSV 96 >ref|NP_001234471.1| transcription factor IIIA [Solanum lycopersicum] gi|115279797|gb|ABI85391.1| transcription factor IIIA [Solanum lycopersicum] gi|115279800|gb|ABI85393.1| transcription factor IIIA [Solanum lycopersicum] Length = 372 Score = 81.6 bits (200), Expect = 6e-14 Identities = 39/94 (41%), Positives = 50/94 (53%), Gaps = 5/94 (5%) Frame = -3 Query: 268 GEAETSKRPPIFRDIRRYYCDYCGISRXXXXXXXXXXXXXXXXXXXXXXXXXE-----TQ 104 GE KR +FRDIRRYYC++CG+ R ++ Sbjct: 2 GEVGEEKREVVFRDIRRYYCEFCGLCRSKKSLISSHIQSHHQDVIESLKDDATENAKGSK 61 Query: 103 SNTCEECGVSFRKPAYLKQHMQSHSFERPFACPV 2 N CEECG +F+KPA+LKQH+QSHS ERPF C + Sbjct: 62 MNICEECGATFQKPAHLKQHLQSHSLERPFVCHI 95 >ref|XP_002327353.1| predicted protein [Populus trichocarpa] gi|222835723|gb|EEE74158.1| predicted protein [Populus trichocarpa] Length = 335 Score = 79.0 bits (193), Expect = 4e-13 Identities = 40/80 (50%), Positives = 43/80 (53%), Gaps = 5/80 (6%) Frame = -3 Query: 232 RDIRRYYCDYCGISRXXXXXXXXXXXXXXXXXXXXXXXXXE-----TQSNTCEECGVSFR 68 RDIRRYYCDYCGI R + +SNTCE CG SF+ Sbjct: 1 RDIRRYYCDYCGICRSKKSLITSHVLTHHKEEMDEESVDGDEGKEGVKSNTCENCGASFK 60 Query: 67 KPAYLKQHMQSHSFERPFAC 8 KPAYL QHMQSHS ERPF C Sbjct: 61 KPAYLIQHMQSHSLERPFKC 80