BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015227
         (1234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279505.2| PREDICTED: chloroplastic group IIA intron sp...   257   4e-66
emb|CBI27903.3| unnamed protein product [Vitis vinifera]              245   2e-62
ref|XP_002514120.1| conserved hypothetical protein [Ricinus comm...   231   3e-58
ref|XP_004144114.1| PREDICTED: chloroplastic group IIA intron sp...   225   2e-56
ref|XP_004171699.1| PREDICTED: chloroplastic group IIA intron sp...   222   2e-55

>ref|XP_002279505.2| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Vitis vinifera]
          Length = 884

 Score =  257 bits (657), Expect = 4e-66
 Identities = 157/381 (41%), Positives = 220/381 (57%), Gaps = 8/381 (2%)
 Frame = +2

Query: 113  SNKFRRFHLKSSYSCSYQTIELENQEIHNPKVVTIGPXXXXXXXXPRPSFYEQIRDKWSL 292
            SN FR   LK + SCSY +I+++ Q++  P   T           PRPSF+EQIRDKWSL
Sbjct: 23   SNTFRT--LKFNCSCSYHSIQVDTQQVKVPLKTT------KAKRKPRPSFFEQIRDKWSL 74

Query: 293  KVDSQRVKFPWQEQEDQKGVEDENEQQYSQLSEENGDSPLLNDPVSLSLRSHLSSAPWMS 472
            K++S R KFPWQEQ +    E +N         E  DS +   PVS +  S   S P + 
Sbjct: 75   KINSPREKFPWQEQAE----ETQNSSGVVVPDSEVIDSSV-GSPVSSASESRFVSVPCIH 129

Query: 473  RSNLKNPQFDANPEFAQKRSPFD------GDEFSKIPEESKDLRGVTKNNRDFDSK-IEL 631
             S  +NP+  + PE +Q            G   + + E SK  +    ++  F+ + +E+
Sbjct: 130  ESKPRNPRLVSEPEISQNSCEQGVNVVGFGSHRASVDEWSKSFQKEVDSDGKFEGEGVEV 189

Query: 632  AQNGYISEDDEISELGKGAKNVSDSSKEVDDFGEDVITFMVSNRKVDTMQLPWESKSGLE 811
             +        E +E+  G  NVS + K      ED   F   +     ++LPW+ + GL+
Sbjct: 190  DEIPIGVLGTEKTEIEMGDANVSLNEKPPGG-DEDFGNFEGFSGNSSLIELPWKRREGLQ 248

Query: 812  SMDKGNLRRSKAEVAEKTIPENELKRLRNISLRMQERIKVRVGGVTQALVDRIHEKWKVE 991
             +++    R    +AE+ +PE+EL+RL+NI+LRM ERIKV   GVTQ+LVD IHEKW+ +
Sbjct: 249  PVERDGWGRRNTRMAERMVPEHELRRLKNIALRMLERIKVGAAGVTQSLVDAIHEKWRKD 308

Query: 992  EVAKLKFEGAPAFNMKRTHETLESRTGGLVIWRSGSSLVLYRGMAYKLPCVQQYTKLSRA 1171
            EV KLKFEG  + NMKRTHE LE+RTGGLVIWR+GSS+VLYRGMAYKL CVQ Y K  R 
Sbjct: 309  EVVKLKFEGPSSCNMKRTHEILETRTGGLVIWRTGSSVVLYRGMAYKLHCVQSYIKQERD 368

Query: 1172 NSNAFNSSKDSTS-DVENVGL 1231
            N N    S+D+ +  ++++G+
Sbjct: 369  NVNISEYSQDAANVIIQDIGV 389


>emb|CBI27903.3| unnamed protein product [Vitis vinifera]
          Length = 881

 Score =  245 bits (625), Expect = 2e-62
 Identities = 151/374 (40%), Positives = 208/374 (55%), Gaps = 1/374 (0%)
 Frame = +2

Query: 113  SNKFRRFHLKSSYSCSYQTIELENQEIHNPKVVTIGPXXXXXXXXPRPSFYEQIRDKWSL 292
            SN FR   LK + SCSY +I+++ Q++  P   T           PRPSF+EQIRDKWSL
Sbjct: 65   SNTFRT--LKFNCSCSYHSIQVDTQQVKVPLKTT------KAKRKPRPSFFEQIRDKWSL 116

Query: 293  KVDSQRVKFPWQEQEDQKGVEDENEQQYSQLSEENGDSPLLNDPVSLSLRSHLSSAPWMS 472
            K++S R KFPWQEQ +    E +N         E  DS +   PVS +  S   S P + 
Sbjct: 117  KINSPREKFPWQEQAE----ETQNSSGVVVPDSEVIDSSV-GSPVSSASESRFVSVPCIH 171

Query: 473  RSNLKNPQFDANPEFAQKRSPFDGDEFSKIPEESKDLRGVTKNNRDFDSKIELAQNGYIS 652
             S  +NP+  + PE +Q              E+  +++                      
Sbjct: 172  ESKPRNPRLVSEPEISQNSC-----------EQGVNVK---------------------- 198

Query: 653  EDDEISELGKGAKNVSDSSKEVDDFGEDVITFMVSNRKVDTMQLPWESKSGLESMDKGNL 832
                 +E+  G  NVS + K      ED   F   +     ++LPW+ + GL+ +++   
Sbjct: 199  -----TEIEMGDANVSLNEKPPGG-DEDFGNFEGFSGNSSLIELPWKRREGLQPVERDGW 252

Query: 833  RRSKAEVAEKTIPENELKRLRNISLRMQERIKVRVGGVTQALVDRIHEKWKVEEVAKLKF 1012
             R    +AE+ +PE+EL+RL+NI+LRM ERIKV   GVTQ+LVD IHEKW+ +EV KLKF
Sbjct: 253  GRRNTRMAERMVPEHELRRLKNIALRMLERIKVGAAGVTQSLVDAIHEKWRKDEVVKLKF 312

Query: 1013 EGAPAFNMKRTHETLESRTGGLVIWRSGSSLVLYRGMAYKLPCVQQYTKLSRANSNAFNS 1192
            EG  + NMKRTHE LE+RTGGLVIWR+GSS+VLYRGMAYKL CVQ Y K  R N N    
Sbjct: 313  EGPSSCNMKRTHEILETRTGGLVIWRTGSSVVLYRGMAYKLHCVQSYIKQERDNVNISEY 372

Query: 1193 SKDSTS-DVENVGL 1231
            S+D+ +  ++++G+
Sbjct: 373  SQDAANVIIQDIGV 386


>ref|XP_002514120.1| conserved hypothetical protein [Ricinus communis]
            gi|223546576|gb|EEF48074.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 930

 Score =  231 bits (589), Expect = 3e-58
 Identities = 144/369 (39%), Positives = 212/369 (57%), Gaps = 41/369 (11%)
 Frame = +2

Query: 248  PRPSFYEQIRDKWSLKVDSQRVKFPWQEQEDQK-----GVEDENEQQYSQLSE------- 391
            PRPSF+EQIRDKWSLKV S R  FPWQE E Q+     G  DE E +  ++S        
Sbjct: 83   PRPSFFEQIRDKWSLKVPSTRDTFPWQEPEQQQEHQGQGKNDEEEIERCEISGVTLSKAE 142

Query: 392  -ENGDSPLLNDPVSLSLRSHLSSAPWMSRSNLKNPQFDANPEFAQKRSPFD--------- 541
             +   S + +D VS+SL +HL++APW+  +  K   F + P+  +     D         
Sbjct: 143  IDANPSSIDDDSVSVSLPNHLTTAPWVHGTRPKKNHFSSRPKIGENVVQNDVHTVVDIVE 202

Query: 542  --------GDEFSK------IPEESKDLRGVTKNNRDFDSKIELAQNGYISEDDEISELG 679
                     D+F K      +    + ++ V  + +  ++K+++   G+  E    +E+ 
Sbjct: 203  NLEKEVTCNDKFKKEDNILHVDNAERLVKEVNYDKKFKEAKVQVG--GFSVELKRDNEIA 260

Query: 680  KGAKNVSDSSKEVDDFGEDV-ITFMVS-NRKVDTMQLPWESKSGLESMDKGNLR--RSKA 847
            +   + S S      FG +      VS +    +++LPWE +  +ES++ G LR  RS  
Sbjct: 261  RAKYSKSPSYINEKPFGANGGYGVQVSYDDNSSSIELPWEKERVMESVE-GYLRGKRSNT 319

Query: 848  EVAEKTIPENELKRLRNISLRMQERIKVRVGGVTQALVDRIHEKWKVEEVAKLKFEGAPA 1027
            E+AE+ +PE+ELKRLRN++LRM ERIKV   G+ Q LVD +HEKW+++EV KLKFE   +
Sbjct: 320  ELAERMLPEHELKRLRNVALRMYERIKVGAAGINQDLVDAVHEKWRLDEVVKLKFEEPLS 379

Query: 1028 FNMKRTHETLESRTGGLVIWRSGSSLVLYRGMAYKLPCVQQYTKLSRANSNAFNSSKDST 1207
            FNM+RTHE LE+RTGGLVIWRSGSS+VLYRG++YKL CV+ ++K   A        ++ T
Sbjct: 380  FNMRRTHEILENRTGGLVIWRSGSSVVLYRGISYKLHCVRSFSKQDEAGKEILAHPEEVT 439

Query: 1208 SDVE-NVGL 1231
            S+   N+G+
Sbjct: 440  SNATLNIGV 448


>ref|XP_004144114.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Cucumis sativus]
          Length = 846

 Score =  225 bits (573), Expect = 2e-56
 Identities = 147/367 (40%), Positives = 198/367 (53%), Gaps = 14/367 (3%)
 Frame = +2

Query: 155  CSYQTIELENQEIHNPKVVTIGPXXXXXXXXPRPSFYEQIRDKWSLKVDSQRVKFPWQEQ 334
            CS  TI++E Q     +V             PRPSF EQIR KWS K  S    FPWQ+Q
Sbjct: 50   CSNNTIQVETQPPRRIRV----DFEVKKKRKPRPSFLEQIRHKWSTKPISSTHTFPWQQQ 105

Query: 335  EDQK--------GVEDENEQQYSQLSEENGDSPLLNDPVSLSLRSHLS-SAPWMSRSNLK 487
            E  +        G E+E E++    ++ +   P     V+ ++    S SAPW   S  +
Sbjct: 106  EQDRHHKQDEGEGEEEEEEEEEQVANQTSVSIPESTTDVTQAVPITRSISAPWAHGSQSR 165

Query: 488  NPQFDANP-----EFAQKRSPFDGDEFSKIPEESKDLRGVTKNNRDFDSKIELAQNGYIS 652
            N QFD  P     E   + S    D+ S     +  +  ++ ++ + +++I+      + 
Sbjct: 166  NTQFDFKPKTPNGEVINEISKISTDDTSNRNASTISIDEISDDSSEDEAEIDTV---VLP 222

Query: 653  EDDEISELGKGAKNVSDSSKEVDDFGEDVITFMVSNRKVDTMQLPWESKSGLESMDKGNL 832
              ++ S L K  K V   S + DD           N +VD   LPW+ +   +S      
Sbjct: 223  VTEKRSTLSK--KIVHSVSSDNDD-----------NGRVD---LPWKREPRRDSEVDAGQ 266

Query: 833  RRSKAEVAEKTIPENELKRLRNISLRMQERIKVRVGGVTQALVDRIHEKWKVEEVAKLKF 1012
            RRSK  +AE+ +PE+EL+RLRNISLRM ERI+V V G+TQ L+D IHEKWKV+EV KLKF
Sbjct: 267  RRSKTLLAEQMLPEHELRRLRNISLRMVERIEVGVKGITQELLDSIHEKWKVDEVVKLKF 326

Query: 1013 EGAPAFNMKRTHETLESRTGGLVIWRSGSSLVLYRGMAYKLPCVQQYTKLSRANSNAFNS 1192
            EG    NMKR HE LE+RTGGLVIWRSGS +VLYRGM Y LPCVQ Y K ++A SN  + 
Sbjct: 327  EGPLTVNMKRAHEKLENRTGGLVIWRSGSLIVLYRGMTYHLPCVQSYAKQNQAKSNTLDV 386

Query: 1193 SKDSTSD 1213
              +  SD
Sbjct: 387  PNNVESD 393


>ref|XP_004171699.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like, partial [Cucumis sativus]
          Length = 789

 Score =  222 bits (565), Expect = 2e-55
 Identities = 140/336 (41%), Positives = 188/336 (55%), Gaps = 14/336 (4%)
 Frame = +2

Query: 248  PRPSFYEQIRDKWSLKVDSQRVKFPWQEQEDQK--------GVEDENEQQYSQLSEENGD 403
            PRPSF EQIR KWS K  S    FPWQ+QE  +        G E+E E++    ++ +  
Sbjct: 20   PRPSFLEQIRHKWSTKPISSTHTFPWQQQEQDRHHKQDEGEGEEEEEEEEEQVANQTSVS 79

Query: 404  SPLLNDPVSLSLRSHLS-SAPWMSRSNLKNPQFDANP-----EFAQKRSPFDGDEFSKIP 565
             P     V+ ++    S SAPW   S  +N QFD  P     E   + S    D+ S   
Sbjct: 80   IPESTTDVTQAVPITRSISAPWAHGSQSRNTQFDFKPKTPNGEVINEISKISTDDTSNRN 139

Query: 566  EESKDLRGVTKNNRDFDSKIELAQNGYISEDDEISELGKGAKNVSDSSKEVDDFGEDVIT 745
              +  +  ++ ++ + +++I+      +   ++ S L K  K V   S + DD       
Sbjct: 140  ASTISIDEISDDSSEDEAEIDTV---VLPVTEKRSTLSK--KIVHSVSSDNDD------- 187

Query: 746  FMVSNRKVDTMQLPWESKSGLESMDKGNLRRSKAEVAEKTIPENELKRLRNISLRMQERI 925
                N +VD   LPW+ +   +S      RRSK  +AE+ +PE+EL+RLRNISLRM ERI
Sbjct: 188  ----NGRVD---LPWKREPRRDSEVDAGQRRSKTLLAEQMLPEHELRRLRNISLRMVERI 240

Query: 926  KVRVGGVTQALVDRIHEKWKVEEVAKLKFEGAPAFNMKRTHETLESRTGGLVIWRSGSSL 1105
            +V V G+TQ L+D IHEKWKV+EV KLKFEG    NMKR HE LE+RTGGLVIWRSGS +
Sbjct: 241  EVGVKGITQELLDSIHEKWKVDEVVKLKFEGPLTVNMKRAHEKLENRTGGLVIWRSGSLI 300

Query: 1106 VLYRGMAYKLPCVQQYTKLSRANSNAFNSSKDSTSD 1213
            VLYRGM Y LPCVQ Y K ++A SN  +   +  SD
Sbjct: 301  VLYRGMTYHLPCVQSYAKQNQAKSNTLDVPNNVESD 336