BLASTX nr result

ID: Cimicifuga21_contig00015222 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015222
         (474 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004168984.1| PREDICTED: pentatricopeptide repeat-containi...   171   6e-41
ref|XP_002322749.1| predicted protein [Populus trichocarpa] gi|2...   169   3e-40
emb|CBI21840.3| unnamed protein product [Vitis vinifera]              166   2e-39
ref|XP_002273904.1| PREDICTED: pentatricopeptide repeat-containi...   166   2e-39
emb|CAN73453.1| hypothetical protein VITISV_024964 [Vitis vinifera]   166   2e-39

>ref|XP_004168984.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Cucumis sativus]
          Length = 461

 Score =  171 bits (433), Expect = 6e-41
 Identities = 77/157 (49%), Positives = 116/157 (73%)
 Frame = +3

Query: 3   YFALSSDDIAARLFLISQVHGIEQAEKYFNNIPKHCKVYRIYFALLRCYACSKSVEKTEP 182
           YF LS+ DIA R+ LI +VHG+EQ E YF+N+P   K Y+++ ALL CYA  K V+K   
Sbjct: 92  YFPLSTADIAIRMNLILRVHGLEQVEDYFDNMPSQLKRYQVHIALLNCYAHEKCVDKANA 151

Query: 183 LMQQMMKLGFANSPRAYNLLLSLYRKVGDIEKLHTLVEEMNEKGVRPDNATYTIRLNAYA 362
            MQ++ ++GFANSP  YN++++LY ++G+ E+L +L++EM E+GV  D  TY+IR++AYA
Sbjct: 152 FMQKIKEMGFANSPLPYNIMMNLYHQIGEFERLDSLLKEMKERGVYYDRFTYSIRISAYA 211

Query: 363 NTSNIDGMEMILQKMEVDPNVIMDWNCCVSAANGYIK 473
             S+  G+E I+++ME +P++++DWNC V AAN Y K
Sbjct: 212 AASDFRGIEKIMEQMESNPSIVLDWNCYVIAANAYNK 248


>ref|XP_002322749.1| predicted protein [Populus trichocarpa] gi|222867379|gb|EEF04510.1|
           predicted protein [Populus trichocarpa]
          Length = 505

 Score =  169 bits (427), Expect = 3e-40
 Identities = 80/157 (50%), Positives = 115/157 (73%)
 Frame = +3

Query: 3   YFALSSDDIAARLFLISQVHGIEQAEKYFNNIPKHCKVYRIYFALLRCYACSKSVEKTEP 182
           YF L+S D+A +L LIS+VHGIEQA+K FNN P+H KV ++Y ALL CYA +K VEK E 
Sbjct: 122 YFELASQDVAVQLDLISKVHGIEQAQKLFNNTPQHLKVLKVYSALLNCYAKAKLVEKAES 181

Query: 183 LMQQMMKLGFANSPRAYNLLLSLYRKVGDIEKLHTLVEEMNEKGVRPDNATYTIRLNAYA 362
           ++Q+M  LGFAN+   YN++L+ Y + G+ +K+++L++EM + G+  D   ++I+L+AYA
Sbjct: 182 VVQEMKSLGFANTLLVYNVILNFYYQTGNPDKINSLMQEMEQNGIGCDKFAHSIQLSAYA 241

Query: 363 NTSNIDGMEMILQKMEVDPNVIMDWNCCVSAANGYIK 473
           + S+I G+E  L KME DPNV +DW    +AA GYIK
Sbjct: 242 SVSDIVGIEKTLAKMESDPNVFLDWTSYTAAAKGYIK 278


>emb|CBI21840.3| unnamed protein product [Vitis vinifera]
          Length = 446

 Score =  166 bits (420), Expect = 2e-39
 Identities = 80/157 (50%), Positives = 111/157 (70%)
 Frame = +3

Query: 3   YFALSSDDIAARLFLISQVHGIEQAEKYFNNIPKHCKVYRIYFALLRCYACSKSVEKTEP 182
           YF +S  D+A +L LIS+VHG+EQAEKYFN  P   + +++Y ALL CY+  KS+EK E 
Sbjct: 98  YFDISPGDVAIQLDLISKVHGLEQAEKYFNETPNSLRSFQVYGALLNCYSQKKSLEKAEA 157

Query: 183 LMQQMMKLGFANSPRAYNLLLSLYRKVGDIEKLHTLVEEMNEKGVRPDNATYTIRLNAYA 362
           +MQ+M  +GF  +  +YN++L LY ++G  EKL  L++EM E G+  D+ TY IRLNAY 
Sbjct: 158 IMQEMRDMGFVKT-LSYNVMLGLYSRLGKHEKLDNLMQEMEENGIGLDSFTYCIRLNAYC 216

Query: 363 NTSNIDGMEMILQKMEVDPNVIMDWNCCVSAANGYIK 473
            TS+++GME +L K+E DP V  DWN  + AANGY+K
Sbjct: 217 ATSDMEGMEKLLMKLETDPAVNSDWNAYIVAANGYLK 253


>ref|XP_002273904.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial [Vitis vinifera]
          Length = 499

 Score =  166 bits (420), Expect = 2e-39
 Identities = 80/157 (50%), Positives = 111/157 (70%)
 Frame = +3

Query: 3   YFALSSDDIAARLFLISQVHGIEQAEKYFNNIPKHCKVYRIYFALLRCYACSKSVEKTEP 182
           YF +S  D+A +L LIS+VHG+EQAEKYFN  P   + +++Y ALL CY+  KS+EK E 
Sbjct: 98  YFDISPGDVAIQLDLISKVHGLEQAEKYFNETPNSLRSFQVYGALLNCYSQKKSLEKAEA 157

Query: 183 LMQQMMKLGFANSPRAYNLLLSLYRKVGDIEKLHTLVEEMNEKGVRPDNATYTIRLNAYA 362
           +MQ+M  +GF  +  +YN++L LY ++G  EKL  L++EM E G+  D+ TY IRLNAY 
Sbjct: 158 IMQEMRDMGFVKT-LSYNVMLGLYSRLGKHEKLDNLMQEMEENGIGLDSFTYCIRLNAYC 216

Query: 363 NTSNIDGMEMILQKMEVDPNVIMDWNCCVSAANGYIK 473
            TS+++GME +L K+E DP V  DWN  + AANGY+K
Sbjct: 217 ATSDMEGMEKLLMKLETDPAVNSDWNAYIVAANGYLK 253


>emb|CAN73453.1| hypothetical protein VITISV_024964 [Vitis vinifera]
          Length = 499

 Score =  166 bits (420), Expect = 2e-39
 Identities = 80/157 (50%), Positives = 111/157 (70%)
 Frame = +3

Query: 3   YFALSSDDIAARLFLISQVHGIEQAEKYFNNIPKHCKVYRIYFALLRCYACSKSVEKTEP 182
           YF +S  D+A +L LIS+VHG+EQAEKYFN  P   + +++Y ALL CY+  KS+EK E 
Sbjct: 98  YFDISPGDVAIQLDLISKVHGLEQAEKYFNETPNSLRSFQVYGALLNCYSQKKSLEKAEA 157

Query: 183 LMQQMMKLGFANSPRAYNLLLSLYRKVGDIEKLHTLVEEMNEKGVRPDNATYTIRLNAYA 362
           +MQ+M  +GF  +  +YN++L LY ++G  EKL  L++EM E G+  D+ TY IRLNAY 
Sbjct: 158 IMQEMRDMGFVKT-LSYNVMLGLYSRLGKHEKLDNLMQEMEENGIGLDSFTYCIRLNAYC 216

Query: 363 NTSNIDGMEMILQKMEVDPNVIMDWNCCVSAANGYIK 473
            TS+++GME +L K+E DP V  DWN  + AANGY+K
Sbjct: 217 ATSDMEGMEKLLMKLETDPAVNSDWNAYIVAANGYLK 253


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