BLASTX nr result

ID: Cimicifuga21_contig00015211 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015211
         (233 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331826.1| multidrug resistance protein ABC transporter...   102   3e-20
ref|XP_002513606.1| multidrug resistance-associated protein 1, 3...    97   2e-18
ref|XP_002318362.1| multidrug resistance protein ABC transporter...    97   2e-18
ref|XP_003536438.1| PREDICTED: ABC transporter C family member 1...    96   3e-18
ref|XP_004164697.1| PREDICTED: LOW QUALITY PROTEIN: ABC transpor...    94   2e-17

>ref|XP_002331826.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222875064|gb|EEF12195.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1423

 Score =  102 bits (254), Expect = 3e-20
 Identities = 48/77 (62%), Positives = 62/77 (80%)
 Frame = +3

Query: 3   ARVALARIEKFLEAPELKSGNVSHESNINMKLEYRIFMKSVKLSWEENQSKPTLRNINLE 182
           A+VA ARI KFLEAPEL++GNV H+ N+   +++ + +KS   SWEEN SKPTLRN++  
Sbjct: 535 AKVAFARIVKFLEAPELQNGNVRHKRNMG-SVDHAVLIKSANFSWEENSSKPTLRNVSFG 593

Query: 183 IKPGERVAICGEVGSGK 233
           I+PGE+VAICGEVGSGK
Sbjct: 594 IRPGEKVAICGEVGSGK 610


>ref|XP_002513606.1| multidrug resistance-associated protein 1, 3 (mrp1, 3),
           abc-transoprter, putative [Ricinus communis]
           gi|223547514|gb|EEF49009.1| multidrug
           resistance-associated protein 1, 3 (mrp1, 3),
           abc-transoprter, putative [Ricinus communis]
          Length = 1481

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 46/77 (59%), Positives = 60/77 (77%)
 Frame = +3

Query: 3   ARVALARIEKFLEAPELKSGNVSHESNINMKLEYRIFMKSVKLSWEENQSKPTLRNINLE 182
           A+VA ARI KFLEAPEL++GN+  + +++    +   + S   SWEEN SKPTLRN+NLE
Sbjct: 592 AKVAFARILKFLEAPELQNGNLQQKQSMD-SANHATLITSANFSWEENSSKPTLRNVNLE 650

Query: 183 IKPGERVAICGEVGSGK 233
           I+PG++VAICGEVGSGK
Sbjct: 651 IRPGDKVAICGEVGSGK 667


>ref|XP_002318362.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222859035|gb|EEE96582.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1240

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 47/77 (61%), Positives = 58/77 (75%)
 Frame = +3

Query: 3   ARVALARIEKFLEAPELKSGNVSHESNINMKLEYRIFMKSVKLSWEENQSKPTLRNINLE 182
           A+VA ARI KFLEAPEL+S NV    N    + + + +KS   SWEEN SKPTLRN++L+
Sbjct: 359 AKVAFARIVKFLEAPELQSRNVQQRRNTG-SVNHSVLIKSADFSWEENSSKPTLRNVSLK 417

Query: 183 IKPGERVAICGEVGSGK 233
           I PGE+VA+CGEVGSGK
Sbjct: 418 IMPGEKVAVCGEVGSGK 434


>ref|XP_003536438.1| PREDICTED: ABC transporter C family member 10-like [Glycine max]
          Length = 1479

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 48/77 (62%), Positives = 59/77 (76%)
 Frame = +3

Query: 3   ARVALARIEKFLEAPELKSGNVSHESNINMKLEYRIFMKSVKLSWEENQSKPTLRNINLE 182
           A+VA ARI KFLEAPEL+S N++    +N      I +KS   SWE+N SKPTLRNINLE
Sbjct: 590 AKVAFARIVKFLEAPELQSVNITQRC-LNENKRGSILIKSADFSWEDNVSKPTLRNINLE 648

Query: 183 IKPGERVAICGEVGSGK 233
           ++PG++VAICGEVGSGK
Sbjct: 649 VRPGQKVAICGEVGSGK 665


>ref|XP_004164697.1| PREDICTED: LOW QUALITY PROTEIN: ABC transporter C family member
           10-like [Cucumis sativus]
          Length = 1479

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 47/77 (61%), Positives = 57/77 (74%)
 Frame = +3

Query: 3   ARVALARIEKFLEAPELKSGNVSHESNINMKLEYRIFMKSVKLSWEENQSKPTLRNINLE 182
           ARV+  RI  FLEAPEL+S +V  +  +NM   Y I + S   SWEEN ++PTLRNINLE
Sbjct: 590 ARVSFTRIVDFLEAPELQSSSVPRKC-VNMNDNYSIRICSASFSWEENSARPTLRNINLE 648

Query: 183 IKPGERVAICGEVGSGK 233
           +KPG +VAICGEVGSGK
Sbjct: 649 VKPGSKVAICGEVGSGK 665


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