BLASTX nr result

ID: Cimicifuga21_contig00015201 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015201
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003907034.1| PREDICTED: uncharacterized protein LOC101012...    69   5e-10
ref|XP_002798787.1| PREDICTED: hypothetical protein LOC716917 [M...    69   5e-10
gb|EIE22402.1| small nuclear ribo protein F [Coccomyxa subellips...    68   9e-10
ref|XP_002506215.1| predicted protein [Micromonas sp. RCC299] gi...    68   9e-10
ref|XP_002742366.1| PREDICTED: Snrpf protein-like [Saccoglossus ...    67   1e-09

>ref|XP_003907034.1| PREDICTED: uncharacterized protein LOC101012297 [Papio anubis]
          Length = 254

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 31/44 (70%), Positives = 35/44 (79%)
 Frame = +2

Query: 134 SRVEKQPFSAPMAASVPVNPKPFLNNLTGKPVMVKLKWGMEYKG 265
           S V    +SA +  S+P+NPKPFLN LTGKPVMVKLKWGMEYKG
Sbjct: 156 SAVSSLQYSAVVTMSLPLNPKPFLNGLTGKPVMVKLKWGMEYKG 199


>ref|XP_002798787.1| PREDICTED: hypothetical protein LOC716917 [Macaca mulatta]
          Length = 240

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 31/44 (70%), Positives = 35/44 (79%)
 Frame = +2

Query: 134 SRVEKQPFSAPMAASVPVNPKPFLNNLTGKPVMVKLKWGMEYKG 265
           S V    +SA +  S+P+NPKPFLN LTGKPVMVKLKWGMEYKG
Sbjct: 142 SAVSSLQYSAVVTMSLPLNPKPFLNGLTGKPVMVKLKWGMEYKG 185


>gb|EIE22402.1| small nuclear ribo protein F [Coccomyxa subellipsoidea C-169]
          Length = 85

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 29/33 (87%), Positives = 32/33 (96%)
 Frame = +2

Query: 167 MAASVPVNPKPFLNNLTGKPVMVKLKWGMEYKG 265
           MAA+VPVNPKPFLN LTGKPV++KLKWGMEYKG
Sbjct: 1   MAATVPVNPKPFLNGLTGKPVIIKLKWGMEYKG 33


>ref|XP_002506215.1| predicted protein [Micromonas sp. RCC299]
           gi|226521486|gb|ACO67473.1| predicted protein
           [Micromonas sp. RCC299]
          Length = 86

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 29/33 (87%), Positives = 32/33 (96%)
 Frame = +2

Query: 167 MAASVPVNPKPFLNNLTGKPVMVKLKWGMEYKG 265
           MAA+VPVNPKPFLN LTGKP++VKLKWGMEYKG
Sbjct: 1   MAATVPVNPKPFLNQLTGKPIIVKLKWGMEYKG 33


>ref|XP_002742366.1| PREDICTED: Snrpf protein-like [Saccoglossus kowalevskii]
          Length = 88

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 29/33 (87%), Positives = 32/33 (96%)
 Frame = +2

Query: 167 MAASVPVNPKPFLNNLTGKPVMVKLKWGMEYKG 265
           MAA++P+NPKPFLN LTGKPVMVKLKWGMEYKG
Sbjct: 1   MAATLPLNPKPFLNGLTGKPVMVKLKWGMEYKG 33


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