BLASTX nr result

ID: Cimicifuga21_contig00015195 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015195
         (1330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269884.1| PREDICTED: peptide chain release factor 1 [V...   592   e-167
ref|XP_002321029.1| predicted protein [Populus trichocarpa] gi|2...   563   e-158
ref|XP_003553645.1| PREDICTED: peptide chain release factor 1-li...   558   e-156
ref|XP_003521543.1| PREDICTED: peptide chain release factor 1-li...   556   e-156
ref|XP_004160536.1| PREDICTED: peptide chain release factor 1-li...   551   e-154

>ref|XP_002269884.1| PREDICTED: peptide chain release factor 1 [Vitis vinifera]
            gi|296086617|emb|CBI32252.3| unnamed protein product
            [Vitis vinifera]
          Length = 411

 Score =  592 bits (1525), Expect = e-167
 Identities = 301/404 (74%), Positives = 335/404 (82%), Gaps = 4/404 (0%)
 Frame = +3

Query: 6    TSNQSLFPS----IFCNRTKKSFLARPSKIVRPPRFVCMAEPYMITKLDSAEKSYEELSV 173
            TS  + FP+    +FCNR +   L RPS+  R PR VCMAEPY+ITKL+SAEK+++ELSV
Sbjct: 6    TSFAARFPARAEQVFCNRVRSFALFRPSRTHRTPRIVCMAEPYLITKLESAEKTWKELSV 65

Query: 174  KLADPDVVSNPSEYQRFAQSMAELDEVVSTYRNFKDCEKQLEEARELAKEDVSDEDMAEM 353
            KLADPD+VSNPSEYQ+ AQSMAELDEVVST++ FKDCEKQLEEA+ LAKED  D DMAEM
Sbjct: 66   KLADPDIVSNPSEYQKLAQSMAELDEVVSTFKRFKDCEKQLEEAKALAKEDGIDADMAEM 125

Query: 354  IASEVKSLSNHXXXXXXXXXXXXXPSDPLDERNILLEVRAGTGGDEAGLWAGDLVRMYQR 533
            IA E+ +L+N              PSDPLD RNILLEVRAGTGGDEAG+WAGDLVRMYQ+
Sbjct: 126  IAYEIGTLTNQLKELEENIKVLLLPSDPLDSRNILLEVRAGTGGDEAGIWAGDLVRMYQK 185

Query: 534  YSERNSLKYTPVSCSEADMGGFKTYVMEVKGKRVYSKLKYESGVHRVQRVPRTEAQGRVH 713
            YSERNS KY PVS SEA+ GGFKTYV+EVKG  VYSKLKYESGVHRVQRVP+TE QGRVH
Sbjct: 186  YSERNSWKYAPVSSSEAEKGGFKTYVLEVKGNCVYSKLKYESGVHRVQRVPQTETQGRVH 245

Query: 714  TSTATVAVMXXXXXXXXXXXXXXXXLTTARSGGAGGQNVNKVETAVDLMHKPTGIRIFCT 893
            TSTATVA+M                LTTARSGGAGGQNVNKVETAVDL HKPTGIRIFCT
Sbjct: 246  TSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAVDLFHKPTGIRIFCT 305

Query: 894  EERTQFQNKNRALQLLRAKLYEIKLKEQQEMIRNERKMQVGTGARAEKIRTYNFKDNRVT 1073
            EERTQ QN++RALQLLRAKLYEIK++EQQE+IRN+RK QVGTGARAEKIRTYN+KDNRVT
Sbjct: 306  EERTQLQNRSRALQLLRAKLYEIKVREQQELIRNQRKSQVGTGARAEKIRTYNYKDNRVT 365

Query: 1074 DHRLKMNFELTSFLDGDIETAIQSCITLEQKELLESLADSVAAP 1205
            DHRLKMNFELTSFLDGDIETA+QSC+ +EQKELLE LA SVA P
Sbjct: 366  DHRLKMNFELTSFLDGDIETAVQSCVAMEQKELLEELAHSVATP 409


>ref|XP_002321029.1| predicted protein [Populus trichocarpa] gi|222861802|gb|EEE99344.1|
            predicted protein [Populus trichocarpa]
          Length = 416

 Score =  563 bits (1452), Expect = e-158
 Identities = 290/394 (73%), Positives = 323/394 (81%), Gaps = 1/394 (0%)
 Frame = +3

Query: 27   PSIFCNRTKKSFLARPS-KIVRPPRFVCMAEPYMITKLDSAEKSYEELSVKLADPDVVSN 203
            P  F     + F  RP+      PR VCMAEPY+ITKL+SAEK+++ELSVKL DPDVVSN
Sbjct: 21   PHHFRQTPSRIFFLRPTLSRSTTPRIVCMAEPYLITKLESAEKTWKELSVKLGDPDVVSN 80

Query: 204  PSEYQRFAQSMAELDEVVSTYRNFKDCEKQLEEARELAKEDVSDEDMAEMIASEVKSLSN 383
            PSEYQ+ AQS+AELDEVVS ++ FKDCEK LE+ R LAKED +DEDMAEMIA E++SLS+
Sbjct: 81   PSEYQKLAQSVAELDEVVSIFKRFKDCEKMLEDTRALAKEDGNDEDMAEMIAYEIESLSS 140

Query: 384  HXXXXXXXXXXXXXPSDPLDERNILLEVRAGTGGDEAGLWAGDLVRMYQRYSERNSLKYT 563
                          PSDPLD RNILLEVRAGTGGDEAGLWAGDLVRMYQRYSE+NS K +
Sbjct: 141  ELKQLEEKLTVLLLPSDPLDARNILLEVRAGTGGDEAGLWAGDLVRMYQRYSEQNSWKVS 200

Query: 564  PVSCSEADMGGFKTYVMEVKGKRVYSKLKYESGVHRVQRVPRTEAQGRVHTSTATVAVMX 743
             +S SEA+ GG+KTYVMEVKGK VYSKLKYESGVHRVQRVP+TEAQGRVHTSTATVA+M 
Sbjct: 201  VISSSEAEKGGYKTYVMEVKGKSVYSKLKYESGVHRVQRVPQTEAQGRVHTSTATVAIMP 260

Query: 744  XXXXXXXXXXXXXXXLTTARSGGAGGQNVNKVETAVDLMHKPTGIRIFCTEERTQFQNKN 923
                           LTTARSGGAGGQNVNKVETAVDL+HKPTGIRIFCTEERTQ QN+N
Sbjct: 261  EVDEVEVVIDPKEYELTTARSGGAGGQNVNKVETAVDLIHKPTGIRIFCTEERTQLQNRN 320

Query: 924  RALQLLRAKLYEIKLKEQQEMIRNERKMQVGTGARAEKIRTYNFKDNRVTDHRLKMNFEL 1103
            RALQLLRAKLYEIK++EQQE IRN+RKMQVGTGARAEKIRTYN+KDNRVTDHRLK+NFEL
Sbjct: 321  RALQLLRAKLYEIKVREQQESIRNQRKMQVGTGARAEKIRTYNYKDNRVTDHRLKVNFEL 380

Query: 1104 TSFLDGDIETAIQSCITLEQKELLESLADSVAAP 1205
            TSFL GDIE A+Q+C  LEQKELLE LA+SV AP
Sbjct: 381  TSFLAGDIENAVQACSALEQKELLEELAESVGAP 414


>ref|XP_003553645.1| PREDICTED: peptide chain release factor 1-like [Glycine max]
          Length = 428

 Score =  558 bits (1437), Expect = e-156
 Identities = 276/372 (74%), Positives = 314/372 (84%)
 Frame = +3

Query: 90   PPRFVCMAEPYMITKLDSAEKSYEELSVKLADPDVVSNPSEYQRFAQSMAELDEVVSTYR 269
            PPR VCMAEPY+ITKL+SAEK+++ELSVKLADPDVVS+P EYQ+ AQS+AELDEVVSTYR
Sbjct: 55   PPRIVCMAEPYLITKLESAEKTWQELSVKLADPDVVSDPKEYQKLAQSVAELDEVVSTYR 114

Query: 270  NFKDCEKQLEEARELAKEDVSDEDMAEMIASEVKSLSNHXXXXXXXXXXXXXPSDPLDER 449
             FKDCEK LEE + LAK+D +DEDM EMI+ E+ SLS               PSDP+D +
Sbjct: 115  RFKDCEKVLEETKALAKDDGNDEDMVEMISFEIDSLSKQLAELEEKLKVLLLPSDPMDAK 174

Query: 450  NILLEVRAGTGGDEAGLWAGDLVRMYQRYSERNSLKYTPVSCSEADMGGFKTYVMEVKGK 629
            NILLEVRAGTGGDEAG+WAGDLVRMY+RYSERNS KY+ VS S A+ GG+KTYVME+KG 
Sbjct: 175  NILLEVRAGTGGDEAGIWAGDLVRMYERYSERNSWKYSLVSSSAAEKGGYKTYVMEIKGN 234

Query: 630  RVYSKLKYESGVHRVQRVPRTEAQGRVHTSTATVAVMXXXXXXXXXXXXXXXXLTTARSG 809
            RVYSKLKYESGVHRVQRVP TE QGRVHTSTATVA+M                LTTARSG
Sbjct: 235  RVYSKLKYESGVHRVQRVPLTETQGRVHTSTATVAIMPEADEVEVIIDPKDIELTTARSG 294

Query: 810  GAGGQNVNKVETAVDLMHKPTGIRIFCTEERTQFQNKNRALQLLRAKLYEIKLKEQQEMI 989
            GAGGQNVNKVETA+DL HKPTGIRIFCTEERTQ +NKNRA QLLRAKLYE+K++EQQE +
Sbjct: 295  GAGGQNVNKVETAIDLFHKPTGIRIFCTEERTQLKNKNRAFQLLRAKLYEMKIREQQESL 354

Query: 990  RNERKMQVGTGARAEKIRTYNFKDNRVTDHRLKMNFELTSFLDGDIETAIQSCITLEQKE 1169
            RN+RK+QVGTGAR+EKIRTYN+KDNRVTDHRLK+N+ELTSFLDGDIE A+QSC+T+EQKE
Sbjct: 355  RNQRKLQVGTGARSEKIRTYNYKDNRVTDHRLKINYELTSFLDGDIEDAVQSCVTMEQKE 414

Query: 1170 LLESLADSVAAP 1205
            LLE LA+SV AP
Sbjct: 415  LLEELAESVGAP 426


>ref|XP_003521543.1| PREDICTED: peptide chain release factor 1-like [Glycine max]
          Length = 429

 Score =  556 bits (1432), Expect = e-156
 Identities = 275/372 (73%), Positives = 314/372 (84%)
 Frame = +3

Query: 90   PPRFVCMAEPYMITKLDSAEKSYEELSVKLADPDVVSNPSEYQRFAQSMAELDEVVSTYR 269
            PPR VCMAEPY+ITKL+SAEK+++ELSVKLADPDVVS+P EYQ+ AQS++ELDEVVSTYR
Sbjct: 56   PPRIVCMAEPYLITKLESAEKTWKELSVKLADPDVVSDPKEYQKLAQSVSELDEVVSTYR 115

Query: 270  NFKDCEKQLEEARELAKEDVSDEDMAEMIASEVKSLSNHXXXXXXXXXXXXXPSDPLDER 449
             FKDCEK LEE + LAK+D +DEDM EMI+ E+ +LS               PSDP+D R
Sbjct: 116  RFKDCEKVLEETKALAKDDGNDEDMVEMISFEIDTLSKQLAELEEKIKVLLLPSDPMDAR 175

Query: 450  NILLEVRAGTGGDEAGLWAGDLVRMYQRYSERNSLKYTPVSCSEADMGGFKTYVMEVKGK 629
            NILLEVRAGTGGDEAG+WAGDLVRMY+RYSERNS KY+ VS S A+ GG+KTYVME+KG 
Sbjct: 176  NILLEVRAGTGGDEAGIWAGDLVRMYERYSERNSWKYSLVSSSAAEKGGYKTYVMEIKGN 235

Query: 630  RVYSKLKYESGVHRVQRVPRTEAQGRVHTSTATVAVMXXXXXXXXXXXXXXXXLTTARSG 809
            RVYSKLKYESGVHRVQRVP TE QGRVHTSTATVA+M                LTTARSG
Sbjct: 236  RVYSKLKYESGVHRVQRVPLTETQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSG 295

Query: 810  GAGGQNVNKVETAVDLMHKPTGIRIFCTEERTQFQNKNRALQLLRAKLYEIKLKEQQEMI 989
            GAGGQNVNKVETA+DL HKPTGIRIFCTEERTQ +N+NRA QLLRAKLYEIK++EQQE +
Sbjct: 296  GAGGQNVNKVETAIDLFHKPTGIRIFCTEERTQLKNRNRAFQLLRAKLYEIKVREQQESL 355

Query: 990  RNERKMQVGTGARAEKIRTYNFKDNRVTDHRLKMNFELTSFLDGDIETAIQSCITLEQKE 1169
            RN+RK+QVGTGAR+EKIRTYN+KDNRVTDHRLK+N+ELTSFLDGDIE A+QSC+T+EQKE
Sbjct: 356  RNQRKLQVGTGARSEKIRTYNYKDNRVTDHRLKINYELTSFLDGDIEDAVQSCVTMEQKE 415

Query: 1170 LLESLADSVAAP 1205
            LLE LA+SV AP
Sbjct: 416  LLEELAESVGAP 427


>ref|XP_004160536.1| PREDICTED: peptide chain release factor 1-like [Cucumis sativus]
          Length = 416

 Score =  551 bits (1420), Expect = e-154
 Identities = 273/372 (73%), Positives = 313/372 (84%)
 Frame = +3

Query: 87   RPPRFVCMAEPYMITKLDSAEKSYEELSVKLADPDVVSNPSEYQRFAQSMAELDEVVSTY 266
            R    +CMAEPY+I KL+SAEK+++ELSVKLADPD+VSNP+EYQ+ AQSM+ELDEVVST+
Sbjct: 42   RASTLICMAEPYLIVKLESAEKTWKELSVKLADPDIVSNPTEYQKLAQSMSELDEVVSTF 101

Query: 267  RNFKDCEKQLEEARELAKEDVSDEDMAEMIASEVKSLSNHXXXXXXXXXXXXXPSDPLDE 446
            R FK+CEKQLEEA+ L+KE  +DEDM EMIA E+ SLS+              PSDPLD 
Sbjct: 102  RKFKECEKQLEEAKALSKESGNDEDMVEMIALEISSLSSELKDIEEKLKVMLLPSDPLDA 161

Query: 447  RNILLEVRAGTGGDEAGLWAGDLVRMYQRYSERNSLKYTPVSCSEADMGGFKTYVMEVKG 626
            RNI+LEVRAGTGGDEAG+WAGDLVRMYQ+YSERNS K++PVS SEA+ GG+KTYV+E+KG
Sbjct: 162  RNIMLEVRAGTGGDEAGIWAGDLVRMYQKYSERNSWKFSPVSSSEAEKGGYKTYVLEIKG 221

Query: 627  KRVYSKLKYESGVHRVQRVPRTEAQGRVHTSTATVAVMXXXXXXXXXXXXXXXXLTTARS 806
            +RVYSKLKYESGVHRVQRVP+TE QGRVHTSTATVA+M                LTTARS
Sbjct: 222  QRVYSKLKYESGVHRVQRVPQTETQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARS 281

Query: 807  GGAGGQNVNKVETAVDLMHKPTGIRIFCTEERTQFQNKNRALQLLRAKLYEIKLKEQQEM 986
            GGAGGQNVNKVETA+DL HKPTGIRIFCTEERTQ QNK RA QLLRAKLYEIK++EQQE 
Sbjct: 282  GGAGGQNVNKVETAIDLFHKPTGIRIFCTEERTQLQNKLRAFQLLRAKLYEIKVREQQEK 341

Query: 987  IRNERKMQVGTGARAEKIRTYNFKDNRVTDHRLKMNFELTSFLDGDIETAIQSCITLEQK 1166
            IRN+RK+QVGTGARAEKIRTYN+KDNRVTDHRLK NFELTSFL+GDIE A+Q+C+T+EQK
Sbjct: 342  IRNQRKLQVGTGARAEKIRTYNYKDNRVTDHRLKTNFELTSFLEGDIEDAVQACVTMEQK 401

Query: 1167 ELLESLADSVAA 1202
            ELLE LA S  A
Sbjct: 402  ELLEELAQSAVA 413


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