BLASTX nr result

ID: Cimicifuga21_contig00015184 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015184
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316422.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13
ref|XP_003618525.1| hypothetical protein MTR_6g012640 [Medicago ...    72   4e-11
ref|XP_003579903.1| PREDICTED: uncharacterized protein LOC100821...    67   1e-09
ref|NP_850646.1| uncharacterized protein [Arabidopsis thaliana] ...    67   2e-09
ref|XP_002877152.1| hypothetical protein ARALYDRAFT_484672 [Arab...    66   3e-09

>ref|XP_002316422.1| predicted protein [Populus trichocarpa] gi|222865462|gb|EEF02593.1|
           predicted protein [Populus trichocarpa]
          Length = 53

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 40/53 (75%), Positives = 43/53 (81%)
 Frame = -1

Query: 225 MNPNLSGLLIGMIGAALTLSAYSQTLVSDTQCIGIGLFVLMFGLLVREGFIPL 67
           MN NL    IG++GA +TLSAYSQT VS TQCI IGLFVLMFGLLVREGFI L
Sbjct: 1   MNRNLGAFWIGLVGATITLSAYSQTFVSPTQCITIGLFVLMFGLLVREGFISL 53


>ref|XP_003618525.1| hypothetical protein MTR_6g012640 [Medicago truncatula]
           gi|355493540|gb|AES74743.1| hypothetical protein
           MTR_6g012640 [Medicago truncatula]
          Length = 77

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 39/61 (63%), Positives = 44/61 (72%)
 Frame = -1

Query: 240 KEKVGMNPNLSGLLIGMIGAALTLSAYSQTLVSDTQCIGIGLFVLMFGLLVREGFIPL*W 61
           +EK  M+ N   LLIG+IGAA TL AYSQT +S +Q I IGL VLMFGLLV EG IPL  
Sbjct: 16  EEKKKMSQNTKALLIGLIGAAFTLFAYSQTFISPSQSITIGLLVLMFGLLVGEGLIPLFM 75

Query: 60  N 58
           N
Sbjct: 76  N 76


>ref|XP_003579903.1| PREDICTED: uncharacterized protein LOC100821668 [Brachypodium
           distachyon]
          Length = 53

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 33/49 (67%), Positives = 39/49 (79%)
 Frame = -1

Query: 225 MNPNLSGLLIGMIGAALTLSAYSQTLVSDTQCIGIGLFVLMFGLLVREG 79
           M+ NLSGLLIG +GAA+TL AY QTLVS TQCIG GL VL+  L ++EG
Sbjct: 1   MDRNLSGLLIGCVGAAMTLLAYEQTLVSSTQCIGAGLVVLICALCIKEG 49


>ref|NP_850646.1| uncharacterized protein [Arabidopsis thaliana]
           gi|26451841|dbj|BAC43013.1| unknown protein [Arabidopsis
           thaliana] gi|28416777|gb|AAO42919.1| At3g29034
           [Arabidopsis thaliana] gi|332644005|gb|AEE77526.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 86

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 33/60 (55%), Positives = 42/60 (70%)
 Frame = -1

Query: 246 EPKEKVGMNPNLSGLLIGMIGAALTLSAYSQTLVSDTQCIGIGLFVLMFGLLVREGFIPL 67
           +P+++     N+  L+IG++G ALTL AYSQT V   + IG GLFVL FGLLV EGFI L
Sbjct: 27  KPRQRSVSRRNMQSLVIGLVGGALTLGAYSQTYVDPGKSIGAGLFVLFFGLLVSEGFISL 86


>ref|XP_002877152.1| hypothetical protein ARALYDRAFT_484672 [Arabidopsis lyrata subsp.
           lyrata] gi|297322990|gb|EFH53411.1| hypothetical protein
           ARALYDRAFT_484672 [Arabidopsis lyrata subsp. lyrata]
          Length = 84

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 32/60 (53%), Positives = 42/60 (70%)
 Frame = -1

Query: 246 EPKEKVGMNPNLSGLLIGMIGAALTLSAYSQTLVSDTQCIGIGLFVLMFGLLVREGFIPL 67
           +P+++     N+  L+IG++GA LTL AYSQT V   + +G GLFVL FGLLV EGFI L
Sbjct: 25  KPRQRSVSRRNMQSLVIGLVGAVLTLGAYSQTYVDPGKSLGAGLFVLFFGLLVSEGFISL 84


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