BLASTX nr result

ID: Cimicifuga21_contig00015168 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015168
         (1136 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285740.1| PREDICTED: uncharacterized protein LOC100260...   108   2e-21
ref|XP_002299100.1| predicted protein [Populus trichocarpa] gi|2...    94   6e-17
ref|XP_002334049.1| predicted protein [Populus trichocarpa] gi|2...    92   3e-16
ref|XP_002304851.1| predicted protein [Populus trichocarpa] gi|2...    82   2e-13
ref|XP_002523411.1| hypothetical protein RCOM_0343080 [Ricinus c...    72   3e-10

>ref|XP_002285740.1| PREDICTED: uncharacterized protein LOC100260500 [Vitis vinifera]
           gi|297746488|emb|CBI16544.3| unnamed protein product
           [Vitis vinifera]
          Length = 134

 Score =  108 bits (270), Expect = 2e-21
 Identities = 61/133 (45%), Positives = 70/133 (52%), Gaps = 5/133 (3%)
 Frame = +3

Query: 333 MRVLFCKLHCP-FICFCKPSSHLLSPCPLQLENTPHVPSS--AVPDAVGQLSXXXXXXXX 503
           MRVLFCK+HCP FICFCKPS H+ +P PL+LEN PHVP S  ++PD    LS        
Sbjct: 1   MRVLFCKIHCPSFICFCKPSPHIYTPGPLKLENNPHVPPSIVSIPDGENHLSGDTIEVKD 60

Query: 504 XSLDGKQEVE--FVPXXXXXXXXXXXXXEVGKGKVQWMDLYGKELTQIKXXXXXXXXXXX 677
            S DGKQ  E                  EVGK +VQWMD  GKEL +IK           
Sbjct: 61  GSSDGKQPDENLLKTSLKKAPSEPGTPKEVGKKRVQWMDFLGKELVEIKEFESSETGDTD 120

Query: 678 XXXXGVRGCVCVI 716
                 RGCVC+I
Sbjct: 121 TEAEDNRGCVCII 133


>ref|XP_002299100.1| predicted protein [Populus trichocarpa] gi|222846358|gb|EEE83905.1|
           predicted protein [Populus trichocarpa]
          Length = 149

 Score = 94.0 bits (232), Expect = 6e-17
 Identities = 50/113 (44%), Positives = 59/113 (52%), Gaps = 8/113 (7%)
 Frame = +3

Query: 330 FMRVLFCKLHCPFICFCKPSSHLLSPCPLQLENTPHVPSSAVPDAVGQL--------SXX 485
           FMRVLFCK+HCPFICFCKPS  +  P PL+LEN+PHVPS+AV   V              
Sbjct: 17  FMRVLFCKIHCPFICFCKPSPRIYGPAPLKLENSPHVPSTAVISVVDASCDDDHVLNDSV 76

Query: 486 XXXXXXXSLDGKQEVEFVPXXXXXXXXXXXXXEVGKGKVQWMDLYGKELTQIK 644
                   +DGKQ                   EV K KV+WMD  GKEL +I+
Sbjct: 77  EVKEGSVGVDGKQSQAQNGLKSSLKKADFDSKEVDKKKVRWMDFLGKELVEIR 129


>ref|XP_002334049.1| predicted protein [Populus trichocarpa] gi|222839667|gb|EEE77990.1|
           predicted protein [Populus trichocarpa]
          Length = 132

 Score = 91.7 bits (226), Expect = 3e-16
 Identities = 49/112 (43%), Positives = 58/112 (51%), Gaps = 8/112 (7%)
 Frame = +3

Query: 333 MRVLFCKLHCPFICFCKPSSHLLSPCPLQLENTPHVPSSAVPDAVGQL--------SXXX 488
           MRVLFCK+HCPFICFCKPS  +  P PL+LEN+PHVPS+AV   V               
Sbjct: 1   MRVLFCKIHCPFICFCKPSPRIYGPAPLKLENSPHVPSTAVISVVDASCDDDHVLNDSVE 60

Query: 489 XXXXXXSLDGKQEVEFVPXXXXXXXXXXXXXEVGKGKVQWMDLYGKELTQIK 644
                  +DGKQ                   EV K KV+WMD  GKEL +I+
Sbjct: 61  VKEGSVGVDGKQSQAQNGLKSSLKKADFDSKEVDKKKVRWMDFLGKELVEIR 112


>ref|XP_002304851.1| predicted protein [Populus trichocarpa] gi|222842283|gb|EEE79830.1|
           predicted protein [Populus trichocarpa]
          Length = 127

 Score = 82.4 bits (202), Expect = 2e-13
 Identities = 48/113 (42%), Positives = 58/113 (51%), Gaps = 9/113 (7%)
 Frame = +3

Query: 333 MRVLFCKLHCP-FICFCKPSSHLLSPCPLQLENTPHVPSSAVPDAVGQLS--------XX 485
           MRVLF K+HCP FICFCKPS  + +P PL+LEN+PHVPS+AV       S          
Sbjct: 1   MRVLFSKIHCPSFICFCKPSPSIYTPGPLKLENSPHVPSTAVISVADASSNDNHVLSDSI 60

Query: 486 XXXXXXXSLDGKQEVEFVPXXXXXXXXXXXXXEVGKGKVQWMDLYGKELTQIK 644
                   +DGKQ                   EV K KVQW+D  GKEL +I+
Sbjct: 61  EVKEGSVGVDGKQPESQNSLKSSLKRAAFDSKEVDKKKVQWIDFLGKELVEIR 113


>ref|XP_002523411.1| hypothetical protein RCOM_0343080 [Ricinus communis]
           gi|223537361|gb|EEF38990.1| hypothetical protein
           RCOM_0343080 [Ricinus communis]
          Length = 125

 Score = 71.6 bits (174), Expect = 3e-10
 Identities = 49/122 (40%), Positives = 61/122 (50%), Gaps = 18/122 (14%)
 Frame = +3

Query: 333 MRVLFCKLHCP-FICFCKPSSHLLSPC--PLQLENTPHVPSS--------------AVPD 461
           MRVLFCK+HCP FICFCKPS+ LL     PL+LE+ PHVPSS              A+ D
Sbjct: 1   MRVLFCKIHCPSFICFCKPSASLLYTAAGPLKLESRPHVPSSTTATTTTTATVISVAITD 60

Query: 462 AVGQLSXXXXXXXXXSLDGKQEVEFVPXXXXXXXXXXXXXEVGKGK-VQWMDLYGKELTQ 638
           ++ ++           +D KQ                   +  K K VQWMDL GKEL Q
Sbjct: 61  SINEVIEESLDVV---VDEKQSQGLKSSLKKSSLLDSEQVDEKKKKTVQWMDLLGKELVQ 117

Query: 639 IK 644
           I+
Sbjct: 118 IR 119


Top