BLASTX nr result

ID: Cimicifuga21_contig00015156 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015156
         (780 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29431.3| unnamed protein product [Vitis vinifera]              103   4e-20
ref|XP_002510762.1| set domain protein, putative [Ricinus commun...    91   4e-16
ref|XP_002300607.1| SET domain protein [Populus trichocarpa] gi|...    70   7e-10
ref|XP_003594905.1| Histone-lysine N-methyltransferase SETD1B [M...    69   9e-10

>emb|CBI29431.3| unnamed protein product [Vitis vinifera]
          Length = 1127

 Score =  103 bits (257), Expect = 4e-20
 Identities = 76/232 (32%), Positives = 105/232 (45%), Gaps = 17/232 (7%)
 Frame = -2

Query: 722  PSERLRSAKSVGDYENFTGTLAITRRVFFDYCMQVMWNAVFHDTVXXXXXXXXXXXXXSD 543
            P E     KSVG  ENF  T  +  R  FD CMQVMWNAVF+  V               
Sbjct: 348  PKESSEKIKSVGGIENFQHTCMVVCRTIFDSCMQVMWNAVFYAPVAEYCSTWRKRKRW-- 405

Query: 542  CSLRPSTAVPIMEESMLLKDSRDMVEKQEIASEQRELDVSICEDEYPPGFGPAKKSSNIK 363
             S  P    P +E++ML +D+ +  EK      Q E + S+CE + PPGFG      +I 
Sbjct: 406  -SGHPRIMHPAVEQAMLFRDNVEKSEKLIDEPLQEEHEYSVCEVDCPPGFGLVMTDQDIH 464

Query: 362  GQSSLSVTSHVHENIAE-----------------VKERVENALHLSVQSLVSEYIKNFVD 234
             QSS+ ++S   E I                   + E V+N L LS + ++ E ++ F++
Sbjct: 465  IQSSVGLSSSTVEGIPFKEKRPSDNVQPYDDMQCIVETVQNELQLSAKMMLVECVEAFIE 524

Query: 233  EEVMKLTYSVVQNKTNEDDNHASKSFCQTSPHDSLDASPELRVEVQGVSAES 78
            EEVM L  S    K  E     +  F    PH + DAS ++   V G+  ES
Sbjct: 525  EEVMNLIDSFKDKKLKE----GTSDFSIQCPHANEDASSDM---VSGLRIES 569


>ref|XP_002510762.1| set domain protein, putative [Ricinus communis]
            gi|223551463|gb|EEF52949.1| set domain protein, putative
            [Ricinus communis]
          Length = 1258

 Score = 90.5 bits (223), Expect = 4e-16
 Identities = 66/226 (29%), Positives = 107/226 (47%), Gaps = 2/226 (0%)
 Frame = -2

Query: 707  RSAKSVGDYENFTGTLAITRRVFFDYCMQVMWNAVFHDTVXXXXXXXXXXXXXSDCSLRP 528
            ++ KSVG  +NF G+ A+  R+ FDYCM+VMWNAVF+D +                S R 
Sbjct: 445  KNTKSVGTIDNFWGSYAVVCRILFDYCMEVMWNAVFYDAIADYSNSWRRRKLW---SARS 501

Query: 527  STAVPIMEESMLLKDSRDMVEKQEIASEQRELDVSICEDEYPPGFGPAKKSSNIKGQSSL 348
            +  +P       +KD    +EK    S + EL V + +D +      +      +  S L
Sbjct: 502  NIRLPAS-----IKDYGGEIEK---LSSELEL-VCLKKDNHAQSHNLSPFLHVRERASKL 552

Query: 347  SVTSH-VHENIAEVKERVENALHLSVQSLVSEYIKNFVDEEVMKLTYSVVQNKTNEDDNH 171
            +  SH  +  I  + E V+N LH+S +   SEY++  +D+EV K+      +K NE+   
Sbjct: 553  NALSHKAYRGIRRILEYVKNELHMSTKPFFSEYVEFLIDKEVGKIVRVSEDDKLNEETVE 612

Query: 170  ASKSFCQTSPHDSLDASPELRVEVQGVSAE-SISVNDIQTDAQPLG 36
            +    CQT+ + S +   EL  +   ++ E S     +    +PLG
Sbjct: 613  SFSRRCQTTDYSSSEFQDELTTDSVKLNVETSDDTQSLVQAGKPLG 658


>ref|XP_002300607.1| SET domain protein [Populus trichocarpa] gi|222842333|gb|EEE79880.1|
            SET domain protein [Populus trichocarpa]
          Length = 1390

 Score = 69.7 bits (169), Expect = 7e-10
 Identities = 68/260 (26%), Positives = 105/260 (40%), Gaps = 17/260 (6%)
 Frame = -2

Query: 773  DVMATSPLRDQLTPVTIPSERLRSAKSVGDYENFTGTLAITRRVFFDYCMQVMWNAVFHD 594
            D  A + + DQ     +  +  RS KSVG+ ++F G+ A+  R   DYCM+VMWNAVF+D
Sbjct: 399  DAAACNYISDQTWADELSVQLPRSTKSVGNADDFWGSYAVICRCLSDYCMEVMWNAVFYD 458

Query: 593  TVXXXXXXXXXXXXXSDCSLRPSTAVPIMEESMLLKDSRDMVEKQEIASEQRELDVSICE 414
            T+                   P   + I E           +  +   S Q     S+  
Sbjct: 459  TIAEYTISWRKSKLWFH---HPYLCMKIEE-----------LPSETYFSGQESPASSV-- 502

Query: 413  DEYPPGFGPAK-KSSNIKGQSSLSVTSHVHENIAE----------------VKERVENAL 285
             + PPGF   K KS +    S  S  +HV +   E                + E V   L
Sbjct: 503  -DCPPGFELLKTKSDHTVPSSITSSCAHVGQEPCEQNSLSFKDCPDDDMKCILESVAYEL 561

Query: 284  HLSVQSLVSEYIKNFVDEEVMKLTYSVVQNKTNEDDNHASKSFCQTSPHDSLDASPELRV 105
            H S +  + EY++  V E+V KL       + NE+    S    Q S + S++   E  +
Sbjct: 562  HKSTKVSLLEYVEILVKEKVKKLVNFSEDKRLNEEIFDFSIPSSQASEYGSIEMKDEKMI 621

Query: 104  EVQGVSAESISVNDIQTDAQ 45
            +   + AE +  +  Q+  Q
Sbjct: 622  DSNQIPAEIMFSSKPQSSLQ 641


>ref|XP_003594905.1| Histone-lysine N-methyltransferase SETD1B [Medicago truncatula]
           gi|355483953|gb|AES65156.1| Histone-lysine
           N-methyltransferase SETD1B [Medicago truncatula]
          Length = 1232

 Score = 69.3 bits (168), Expect = 9e-10
 Identities = 54/192 (28%), Positives = 86/192 (44%), Gaps = 16/192 (8%)
 Frame = -2

Query: 704 SAKSVGDYENFTGTLAITRRVFFDYCMQVMWNAVFHDTVXXXXXXXXXXXXXSDCSLRPS 525
           + KSVG  ENF  + A+ R+V FD+ +QVMWNAVF DTV                S R  
Sbjct: 401 NVKSVGSIENFWWSYAVVRKVLFDHSLQVMWNAVFFDTVTEVLF-----------SWRKK 449

Query: 524 TAVPIMEESMLLKDSRDMVEKQEIASEQRELDVSICEDEYPPGFGPAK------------ 381
                 +    + +S+D VEK +  +       S+C  E     G               
Sbjct: 450 KYWSHPKPQSSVNESKDSVEKLKSEALALGTGSSVCNVEADIQSGAMATERDCHPELLLS 509

Query: 380 ----KSSNIKGQSSLSVTSHVHENIAEVKERVENALHLSVQSLVSEYIKNFVDEEVMKLT 213
               K  NI     +S +    E++  + E VEN LH S ++ +++Y+++ V++EV +L 
Sbjct: 510 PNNIKIGNIAEGQRVSCSYGNSEDLTRILESVENELHCSAKASLADYVRSVVEKEVNQLI 569

Query: 212 YSVVQNKTNEDD 177
            S  ++  +E D
Sbjct: 570 PSPEKDIFSEVD 581


Top