BLASTX nr result

ID: Cimicifuga21_contig00015130 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015130
         (604 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_568914.1| gibberellin-regulated protein [Arabidopsis thal...   125   6e-27
ref|XP_002864654.1| gibberellin-regulated family protein [Arabid...   125   6e-27
gb|AFT92001.1| gibberellin-regulated protein [Populus tomentosa]...   124   1e-26
gb|AFT92002.1| gibberellin-regulated protein [Populus alba x Pop...   123   2e-26
ref|XP_002327192.1| predicted protein [Populus trichocarpa] gi|2...   123   3e-26

>ref|NP_568914.1| gibberellin-regulated protein [Arabidopsis thaliana]
           gi|75155905|sp|Q8LFM2.1|GASAA_ARATH RecName:
           Full=Gibberellin-regulated protein 10; AltName:
           Full=GAST1 protein homolog 10; Flags: Precursor
           gi|21536988|gb|AAM61329.1| contains similarity to
           gibberellin-stimulated transcript 1 like protein
           [Arabidopsis thaliana] gi|26451393|dbj|BAC42796.1|
           unknown protein [Arabidopsis thaliana]
           gi|110737029|dbj|BAF00469.1| hypothetical protein
           [Arabidopsis thaliana] gi|332009858|gb|AED97241.1|
           gibberellin-regulated protein [Arabidopsis thaliana]
          Length = 89

 Score =  125 bits (314), Expect = 6e-27
 Identities = 51/65 (78%), Positives = 53/65 (81%)
 Frame = +1

Query: 211 ADSGVCGSKCKARCAKAGMMDRCLKYCGICCQTCNSCVPSGTYGNKDECPCYRDMKNSKG 390
           ADS  CG KC  RC+KAG  DRCLKYC ICC+ CN CVPSGTYGNKDECPCYRDMKNSKG
Sbjct: 25  ADSSPCGGKCNVRCSKAGRQDRCLKYCNICCEKCNYCVPSGTYGNKDECPCYRDMKNSKG 84

Query: 391 KPKCP 405
             KCP
Sbjct: 85  TSKCP 89


>ref|XP_002864654.1| gibberellin-regulated family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297310489|gb|EFH40913.1|
           gibberellin-regulated family protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 89

 Score =  125 bits (314), Expect = 6e-27
 Identities = 51/65 (78%), Positives = 53/65 (81%)
 Frame = +1

Query: 211 ADSGVCGSKCKARCAKAGMMDRCLKYCGICCQTCNSCVPSGTYGNKDECPCYRDMKNSKG 390
           ADS  CG KC  RC+KAG  DRCLKYC ICC+ CN CVPSGTYGNKDECPCYRDMKNSKG
Sbjct: 25  ADSSPCGGKCNVRCSKAGRQDRCLKYCNICCEKCNYCVPSGTYGNKDECPCYRDMKNSKG 84

Query: 391 KPKCP 405
             KCP
Sbjct: 85  TSKCP 89


>gb|AFT92001.1| gibberellin-regulated protein [Populus tomentosa]
           gi|407260789|gb|AFT92013.1| gibberellin-regulated
           protein [Populus tomentosa]
          Length = 88

 Score =  124 bits (312), Expect = 1e-26
 Identities = 53/65 (81%), Positives = 56/65 (86%)
 Frame = +1

Query: 211 ADSGVCGSKCKARCAKAGMMDRCLKYCGICCQTCNSCVPSGTYGNKDECPCYRDMKNSKG 390
           A SG C SKC ARC+KAG+ DRCLKYCGICC+ C  CVPSGTYGNK ECPCYRDMKNSKG
Sbjct: 25  AASGFCDSKCSARCSKAGIKDRCLKYCGICCEKCK-CVPSGTYGNKHECPCYRDMKNSKG 83

Query: 391 KPKCP 405
           KPKCP
Sbjct: 84  KPKCP 88


>gb|AFT92002.1| gibberellin-regulated protein [Populus alba x Populus tremula var.
           glandulosa] gi|407260791|gb|AFT92014.1|
           gibberellin-regulated protein [Populus alba x Populus
           tremula var. glandulosa]
          Length = 88

 Score =  123 bits (309), Expect = 2e-26
 Identities = 53/65 (81%), Positives = 56/65 (86%)
 Frame = +1

Query: 211 ADSGVCGSKCKARCAKAGMMDRCLKYCGICCQTCNSCVPSGTYGNKDECPCYRDMKNSKG 390
           A SG C SKC ARC+KAG+ DRCLKYCGICC+ C  CVPSGTYGNK ECPCYRDMKNSKG
Sbjct: 25  AASGFCDSKCSARCSKAGIKDRCLKYCGICCEKCK-CVPSGTYGNKLECPCYRDMKNSKG 83

Query: 391 KPKCP 405
           KPKCP
Sbjct: 84  KPKCP 88


>ref|XP_002327192.1| predicted protein [Populus trichocarpa] gi|222835507|gb|EEE73942.1|
           predicted protein [Populus trichocarpa]
          Length = 88

 Score =  123 bits (308), Expect = 3e-26
 Identities = 52/65 (80%), Positives = 55/65 (84%)
 Frame = +1

Query: 211 ADSGVCGSKCKARCAKAGMMDRCLKYCGICCQTCNSCVPSGTYGNKDECPCYRDMKNSKG 390
           A SG C SKC  RC+KAG+ DRCLKYCGICC+ C  CVPSGTYGNK ECPCYRDMKNSKG
Sbjct: 25  AASGFCDSKCSVRCSKAGIKDRCLKYCGICCEKCK-CVPSGTYGNKHECPCYRDMKNSKG 83

Query: 391 KPKCP 405
           KPKCP
Sbjct: 84  KPKCP 88


Top