BLASTX nr result

ID: Cimicifuga21_contig00015109 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015109
         (214 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ85065.1| predicted protein [Hordeum vulgare subsp. vulgare]     59   2e-10
ref|NP_001142376.1| PAS2 [Zea mays] gi|194700472|gb|ACF84320.1| ...    59   4e-10
gb|ACG31453.1| PAS2 [Zea mays]                                         59   4e-10
ref|NP_001052344.1| Os04g0271200 [Oryza sativa Japonica Group] g...    57   7e-10
gb|EEC76909.1| hypothetical protein OsI_15146 [Oryza sativa Indi...    57   7e-10

>dbj|BAJ85065.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 118

 Score = 59.3 bits (142), Expect(2) = 2e-10
 Identities = 28/40 (70%), Positives = 31/40 (77%)
 Frame = -1

Query: 121 SEKYCVRMPNKWNFSFDYFYAASLRLLLLESMSQSGSPHM 2
           SEKYCVRMPNKWN+SFDYFYA+ L LL+       GSPHM
Sbjct: 65  SEKYCVRMPNKWNYSFDYFYASILVLLVY----VPGSPHM 100



 Score = 30.4 bits (67), Expect(2) = 2e-10
 Identities = 13/18 (72%), Positives = 14/18 (77%)
 Frame = -2

Query: 198 QIIHYSFFGLKEAFDSAP 145
           +II YSFFG KE F SAP
Sbjct: 12  EIIRYSFFGTKELFGSAP 29


>ref|NP_001142376.1| PAS2 [Zea mays] gi|194700472|gb|ACF84320.1| unknown [Zea mays]
           gi|194708530|gb|ACF88349.1| unknown [Zea mays]
           gi|195625812|gb|ACG34736.1| PAS2 [Zea mays]
           gi|238010170|gb|ACR36120.1| unknown [Zea mays]
           gi|414876327|tpg|DAA53458.1| TPA: PAS2 [Zea mays]
          Length = 221

 Score = 58.9 bits (141), Expect(2) = 4e-10
 Identities = 26/40 (65%), Positives = 31/40 (77%)
 Frame = -1

Query: 121 SEKYCVRMPNKWNFSFDYFYAASLRLLLLESMSQSGSPHM 2
           SEKYC+RMPNKWNFS+DYFY++ L LL+       GSPHM
Sbjct: 168 SEKYCIRMPNKWNFSYDYFYSSVLALLIY----VPGSPHM 203



 Score = 30.0 bits (66), Expect(2) = 4e-10
 Identities = 13/18 (72%), Positives = 14/18 (77%)
 Frame = -2

Query: 198 QIIHYSFFGLKEAFDSAP 145
           +II YSFFG KEAF  AP
Sbjct: 115 EIIRYSFFGTKEAFGFAP 132


>gb|ACG31453.1| PAS2 [Zea mays]
          Length = 162

 Score = 58.9 bits (141), Expect(2) = 4e-10
 Identities = 26/40 (65%), Positives = 31/40 (77%)
 Frame = -1

Query: 121 SEKYCVRMPNKWNFSFDYFYAASLRLLLLESMSQSGSPHM 2
           SEKYC+RMPNKWNFS+DYFY++ L LL+       GSPHM
Sbjct: 109 SEKYCIRMPNKWNFSYDYFYSSVLALLIY----VPGSPHM 144



 Score = 30.0 bits (66), Expect(2) = 4e-10
 Identities = 13/18 (72%), Positives = 14/18 (77%)
 Frame = -2

Query: 198 QIIHYSFFGLKEAFDSAP 145
           +II YSFFG KEAF  AP
Sbjct: 56  EIIRYSFFGTKEAFGFAP 73


>ref|NP_001052344.1| Os04g0271200 [Oryza sativa Japonica Group]
           gi|75144379|sp|Q7XSZ4.2|PAS2A_ORYSJ RecName:
           Full=Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier
           protein] dehydratase PASTICCINO 2A; AltName:
           Full=3-hydroxyacyl-CoA dehydratase PASTICCINO 2A;
           Short=HACD; Short=PAS2A; AltName: Full=Protein tyrosine
           phosphatase-like protein gi|38344078|emb|CAE01738.2|
           OSJNBb0056F09.1 [Oryza sativa Japonica Group]
           gi|38347039|emb|CAD39891.2| OSJNBb0067G11.14 [Oryza
           sativa Japonica Group] gi|113563915|dbj|BAF14258.1|
           Os04g0271200 [Oryza sativa Japonica Group]
           gi|215765586|dbj|BAG87283.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222628510|gb|EEE60642.1| hypothetical protein
           OsJ_14083 [Oryza sativa Japonica Group]
          Length = 221

 Score = 57.0 bits (136), Expect(2) = 7e-10
 Identities = 26/40 (65%), Positives = 31/40 (77%)
 Frame = -1

Query: 121 SEKYCVRMPNKWNFSFDYFYAASLRLLLLESMSQSGSPHM 2
           SEKYC+RMPNKWNFSFD+FYA+ L L    ++   GSPHM
Sbjct: 168 SEKYCLRMPNKWNFSFDFFYASILSL----AIYVPGSPHM 203



 Score = 31.2 bits (69), Expect(2) = 7e-10
 Identities = 13/18 (72%), Positives = 15/18 (83%)
 Frame = -2

Query: 198 QIIHYSFFGLKEAFDSAP 145
           +II YSFFG+KEAF  AP
Sbjct: 115 EIIRYSFFGMKEAFGFAP 132


>gb|EEC76909.1| hypothetical protein OsI_15146 [Oryza sativa Indica Group]
          Length = 221

 Score = 57.0 bits (136), Expect(2) = 7e-10
 Identities = 26/40 (65%), Positives = 31/40 (77%)
 Frame = -1

Query: 121 SEKYCVRMPNKWNFSFDYFYAASLRLLLLESMSQSGSPHM 2
           SEKYC+RMPNKWNFSFD+FYA+ L L    ++   GSPHM
Sbjct: 168 SEKYCLRMPNKWNFSFDFFYASILSL----AVYVPGSPHM 203



 Score = 31.2 bits (69), Expect(2) = 7e-10
 Identities = 13/18 (72%), Positives = 15/18 (83%)
 Frame = -2

Query: 198 QIIHYSFFGLKEAFDSAP 145
           +II YSFFG+KEAF  AP
Sbjct: 115 EIIRYSFFGMKEAFGFAP 132


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