BLASTX nr result

ID: Cimicifuga21_contig00015103 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015103
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510762.1| set domain protein, putative [Ricinus commun...    72   4e-11
ref|XP_002863792.1| hypothetical protein ARALYDRAFT_494795 [Arab...    61   8e-08
emb|CBI29431.3| unnamed protein product [Vitis vinifera]               61   1e-07
ref|XP_002300607.1| SET domain protein [Populus trichocarpa] gi|...    61   1e-07
gb|AFW55952.1| putative SET-domain containing protein family [Ze...    60   1e-07

>ref|XP_002510762.1| set domain protein, putative [Ricinus communis]
            gi|223551463|gb|EEF52949.1| set domain protein, putative
            [Ricinus communis]
          Length = 1258

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 31/56 (55%), Positives = 41/56 (73%)
 Frame = -1

Query: 169  NAAKKPKSRQLELLKVKPTRSAKQDSCPKSDGCARCSISGWDWRKWSSNASPADRA 2
            + +K+  SRQ+   K K  +S   +SCP+SDGCAR SI+GW+W KWS +ASPADRA
Sbjct: 1004 SGSKQAASRQVTAGKAKSRKSRASNSCPRSDGCARSSITGWEWHKWSHSASPADRA 1059


>ref|XP_002863792.1| hypothetical protein ARALYDRAFT_494795 [Arabidopsis lyrata subsp.
            lyrata] gi|297309627|gb|EFH40051.1| hypothetical protein
            ARALYDRAFT_494795 [Arabidopsis lyrata subsp. lyrata]
          Length = 1414

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 36/76 (47%), Positives = 44/76 (57%)
 Frame = -1

Query: 232  NTSQFSNAKVLSVKTNRVKFCNAAKKPKSRQLELLKVKPTRSAKQDSCPKSDGCARCSIS 53
            +T++ S  K LSV   R K  + A KP    LE L  KP++     SCPK DGCAR SI+
Sbjct: 1127 HTTERSPIKDLSVDDGRPK--SIALKP----LEKLSSKPSKKKVLLSCPKCDGCARTSIN 1180

Query: 52   GWDWRKWSSNASPADR 5
            GW WR WS  AS  +R
Sbjct: 1181 GWHWRAWSLKASAEER 1196


>emb|CBI29431.3| unnamed protein product [Vitis vinifera]
          Length = 1127

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 28/55 (50%), Positives = 37/55 (67%)
 Frame = -1

Query: 166  AAKKPKSRQLELLKVKPTRSAKQDSCPKSDGCARCSISGWDWRKWSSNASPADRA 2
            AAK+   RQ+ + K K ++    + C +S GCAR SI+GWDWR WS NASP +RA
Sbjct: 938  AAKQDTGRQVAVHKSKFSKFKTLNPCLRSVGCARSSINGWDWRNWSLNASPTERA 992


>ref|XP_002300607.1| SET domain protein [Populus trichocarpa] gi|222842333|gb|EEE79880.1|
            SET domain protein [Populus trichocarpa]
          Length = 1390

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 27/55 (49%), Positives = 35/55 (63%)
 Frame = -1

Query: 166  AAKKPKSRQLELLKVKPTRSAKQDSCPKSDGCARCSISGWDWRKWSSNASPADRA 2
            A K+  + Q    K K ++S     CP+SDGCAR SI+GW+W  WS  ASPA+RA
Sbjct: 1046 ANKQTATGQFTARKTKSSKSRMLIPCPRSDGCARSSINGWEWHAWSVKASPAERA 1100



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 32/72 (44%), Positives = 41/72 (56%)
 Frame = -1

Query: 304  ASPADRARARGTQFAPLTYLDSEANTSQFSNAKVLSVKTNRVKFCNAAKKPKSRQLELLK 125
            ASPA+RAR RG +     Y  SEA  SQ SN KVLS +TNRVK  N     +   ++LLK
Sbjct: 1094 ASPAERARVRGVRCIHAKYSGSEAYASQLSNGKVLSARTNRVKLRNLLAAAEG--VDLLK 1151

Query: 124  VKPTRSAKQDSC 89
                ++ K+  C
Sbjct: 1152 ATQLKARKKRLC 1163


>gb|AFW55952.1| putative SET-domain containing protein family [Zea mays]
          Length = 710

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 29/56 (51%), Positives = 37/56 (66%), Gaps = 3/56 (5%)
 Frame = -1

Query: 160 KKPKSRQLEL---LKVKPTRSAKQDSCPKSDGCARCSISGWDWRKWSSNASPADRA 2
           KK K R +      KVKP  S     CP+SDGCAR SI+GW+WR W+ NA+P++RA
Sbjct: 468 KKKKGRNISSETSQKVKPVIS-----CPESDGCARASINGWEWRNWARNATPSERA 518


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