BLASTX nr result

ID: Cimicifuga21_contig00015102 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015102
         (606 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509454.1| zinc finger protein, putative [Ricinus commu...    82   6e-14
emb|CAA66604.1| Zn finger protein [Nicotiana tabacum]                  82   1e-13
emb|CAA08755.1| Dof zinc finger protein [Nicotiana tabacum]            81   2e-13
gb|ABI16020.1| Dof19, partial [Glycine max]                            81   2e-13
tpg|DAA34022.1| TPA_inf: Dof-type zinc finger protein 19 [Sorghu...    80   2e-13

>ref|XP_002509454.1| zinc finger protein, putative [Ricinus communis]
           gi|223549353|gb|EEF50841.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 314

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 35/82 (42%), Positives = 54/82 (65%)
 Frame = +1

Query: 4   EVLQPQHRNKEEQQAVGKNEQAPRPGPPQCPLCNS*NTKFXXXXXXXTSQPRFYYKTCKR 183
           ++L+P     ++++  G+N+  P+  P +CP C S NTKF        SQPR++ KTC+R
Sbjct: 6   DILKPN----QDRRIQGENQNQPQQQPQKCPRCESMNTKFCYYNNYSLSQPRYFCKTCRR 61

Query: 184 YWTQGGSFRDIPIGGTSRKVKK 249
           YWTQGG+ R++P+GG  RK K+
Sbjct: 62  YWTQGGTLRNVPVGGGCRKGKR 83


>emb|CAA66604.1| Zn finger protein [Nicotiana tabacum]
          Length = 238

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 47/105 (44%), Positives = 56/105 (53%)
 Frame = +1

Query: 91  CPLCNS*NTKFXXXXXXXTSQPRFYYKTCKRYWTQGGSFRDIPIGGTSRKVKKFSKQAFT 270
           CP CNS NTKF        SQPR++ KTCKRYWT+GGS R IPIGG SRK KK S    T
Sbjct: 42  CPRCNSTNTKFCYYNNYSLSQPRYFCKTCKRYWTEGGSLRSIPIGGGSRKSKKSSS---T 98

Query: 271 *CHCSGKSLSCCSHTCFKSHFIFDDQRTENKQWIKLIFQVDWMSL 405
            C  S   L   S        + D  + E  Q + L F  D+ ++
Sbjct: 99  NCSSSNTVLREFSKNVVAP--VLDPPKMEGSQDLNLGFSCDFKTI 141


>emb|CAA08755.1| Dof zinc finger protein [Nicotiana tabacum]
          Length = 262

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 50/131 (38%), Positives = 70/131 (53%), Gaps = 3/131 (2%)
 Frame = +1

Query: 61  EQAPRPGPPQ---CPLCNS*NTKFXXXXXXXTSQPRFYYKTCKRYWTQGGSFRDIPIGGT 231
           E+ PRP   Q   CP CNS NTKF        SQPR++ KTC+RYWT+GGS R++P+GG 
Sbjct: 25  ERKPRPQKEQAINCPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPVGGG 84

Query: 232 SRKVKKFSKQAFT*CHCSGKSLSCCSHTCFKSHFIFDDQRTENKQWIKLIFQVDWMSLPM 411
           SRK K+ S         S  S S  S +  K   +     ++N + I      +   L +
Sbjct: 85  SRKNKRSSSS-------SNNSSSSTSSSYKKIPDLTIPTSSQNPKIIN-----EPHDLNL 132

Query: 412 AFHNSSANNYS 444
           AF+ S+ +N+S
Sbjct: 133 AFNPSATSNFS 143


>gb|ABI16020.1| Dof19, partial [Glycine max]
          Length = 156

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 39/78 (50%), Positives = 50/78 (64%), Gaps = 3/78 (3%)
 Frame = +1

Query: 46  AVGKNEQAPRPGPPQ---CPLCNS*NTKFXXXXXXXTSQPRFYYKTCKRYWTQGGSFRDI 216
           AVG  E+ PRP   Q   CP C+S NTKF        +QPR++ KTC+RYWT+GG+ R+I
Sbjct: 29  AVGSVERKPRPQKEQAINCPRCHSINTKFCYYNNYSLTQPRYFCKTCRRYWTEGGTLRNI 88

Query: 217 PIGGTSRKVKKFSKQAFT 270
           P+GG SRK K+ S    T
Sbjct: 89  PVGGGSRKNKRSSASCST 106


>tpg|DAA34022.1| TPA_inf: Dof-type zinc finger protein 19 [Sorghum bicolor]
           gi|333411057|gb|AEF32403.1| Dof-type zinc finger protein
           [Sorghum bicolor]
          Length = 321

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 38/75 (50%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
 Frame = +1

Query: 40  QQAVGKNEQAPRPGPPQ---CPLCNS*NTKFXXXXXXXTSQPRFYYKTCKRYWTQGGSFR 210
           QQA G  E+ PRP   +   CP CNS NTKF       TSQPR++ K C+RYWT GG+ R
Sbjct: 23  QQASGSGERKPRPQLAEALRCPRCNSNNTKFCYYNNYSTSQPRYFCKGCRRYWTHGGALR 82

Query: 211 DIPIGGTSRKVKKFS 255
           ++P+GG  RK K+ S
Sbjct: 83  NVPVGGGCRKNKRTS 97


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