BLASTX nr result

ID: Cimicifuga21_contig00015097 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015097
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB72800.1| WD-40 repeat protein-like protein [Solanum tubero...   183   1e-44
ref|XP_002282252.1| PREDICTED: glutamate-rich WD repeat-containi...   181   5e-44
ref|XP_003531198.1| PREDICTED: LOW QUALITY PROTEIN: glutamate-ri...   176   2e-42
ref|XP_003524897.1| PREDICTED: glutamate-rich WD repeat-containi...   174   9e-42
ref|XP_004173317.1| PREDICTED: glutamate-rich WD repeat-containi...   172   3e-41

>gb|ABB72800.1| WD-40 repeat protein-like protein [Solanum tuberosum]
          Length = 464

 Score =  183 bits (464), Expect = 1e-44
 Identities = 82/101 (81%), Positives = 92/101 (91%)
 Frame = -3

Query: 362 ESSSSAVPSIPAKVWQPGVDKLEEDEELQCDPSAYNSLHAFHIGWPCLSFDIVRDQLGLI 183
           E SS +VPS+PAKVWQPGVDKLEE EELQCD SAYNSLHAFHIGWPCLSFD++RD LGL+
Sbjct: 21  EGSSDSVPSLPAKVWQPGVDKLEEGEELQCDASAYNSLHAFHIGWPCLSFDVLRDSLGLV 80

Query: 182 RTEFPHTLYCIAGTQAENASWNYIGLFKLSKISGKRRALVP 60
           RTEFPH++YC+AGTQAE +SWN IG+FKLS ISGKRR LVP
Sbjct: 81  RTEFPHSVYCVAGTQAEKSSWNSIGIFKLSNISGKRRDLVP 121


>ref|XP_002282252.1| PREDICTED: glutamate-rich WD repeat-containing protein 1 [Vitis
           vinifera] gi|297738673|emb|CBI27918.3| unnamed protein
           product [Vitis vinifera]
          Length = 474

 Score =  181 bits (459), Expect = 5e-44
 Identities = 82/99 (82%), Positives = 90/99 (90%)
 Frame = -3

Query: 353 SSAVPSIPAKVWQPGVDKLEEDEELQCDPSAYNSLHAFHIGWPCLSFDIVRDQLGLIRTE 174
           SS+VPS+P KVWQPGVDKLEE EELQCDPSAYNSLHAFH+GWPCLSFDIVRD LGL+R+E
Sbjct: 24  SSSVPSLPTKVWQPGVDKLEEGEELQCDPSAYNSLHAFHVGWPCLSFDIVRDSLGLVRSE 83

Query: 173 FPHTLYCIAGTQAENASWNYIGLFKLSKISGKRRALVPT 57
           FPHT Y +AGTQAE ASWN IG+FKLS ISGK+R LVPT
Sbjct: 84  FPHTAYFVAGTQAEKASWNSIGIFKLSNISGKKRELVPT 122


>ref|XP_003531198.1| PREDICTED: LOW QUALITY PROTEIN: glutamate-rich WD repeat-containing
           protein 1-like [Glycine max]
          Length = 472

 Score =  176 bits (446), Expect = 2e-42
 Identities = 82/103 (79%), Positives = 89/103 (86%)
 Frame = -3

Query: 359 SSSSAVPSIPAKVWQPGVDKLEEDEELQCDPSAYNSLHAFHIGWPCLSFDIVRDQLGLIR 180
           SSSS  P IPAKVWQPGVDKLEE EELQCDPSAYNSLHAFHIGWPCLSFDI+RD LGL+R
Sbjct: 19  SSSSLAPEIPAKVWQPGVDKLEEGEELQCDPSAYNSLHAFHIGWPCLSFDILRDSLGLVR 78

Query: 179 TEFPHTLYCIAGTQAENASWNYIGLFKLSKISGKRRALVPTGG 51
           TEFPHT+Y +AGTQAE  SWN IG+FK+S I+GKRR  VP  G
Sbjct: 79  TEFPHTVYFMAGTQAEKPSWNSIGIFKVSNITGKRREPVPKLG 121


>ref|XP_003524897.1| PREDICTED: glutamate-rich WD repeat-containing protein 1-like
           [Glycine max]
          Length = 475

 Score =  174 bits (440), Expect = 9e-42
 Identities = 81/103 (78%), Positives = 88/103 (85%)
 Frame = -3

Query: 359 SSSSAVPSIPAKVWQPGVDKLEEDEELQCDPSAYNSLHAFHIGWPCLSFDIVRDQLGLIR 180
           SSSS  P IPAKVWQPGVDKLEE EELQCDPSAYNSLHAFHIGWPCLSFDI+RD LGL+R
Sbjct: 24  SSSSLAPEIPAKVWQPGVDKLEEGEELQCDPSAYNSLHAFHIGWPCLSFDILRDSLGLVR 83

Query: 179 TEFPHTLYCIAGTQAENASWNYIGLFKLSKISGKRRALVPTGG 51
            EFPHT+Y +AGTQAE  SWN IG+FK+S I+GKRR  VP  G
Sbjct: 84  KEFPHTVYFMAGTQAEKPSWNSIGIFKVSNITGKRREPVPKLG 126


>ref|XP_004173317.1| PREDICTED: glutamate-rich WD repeat-containing protein 1-like,
           partial [Cucumis sativus]
          Length = 465

 Score =  172 bits (436), Expect = 3e-41
 Identities = 77/101 (76%), Positives = 92/101 (91%)
 Frame = -3

Query: 359 SSSSAVPSIPAKVWQPGVDKLEEDEELQCDPSAYNSLHAFHIGWPCLSFDIVRDQLGLIR 180
           +SSS++PS+PAKVW+PGVDKLEE EELQCDP+AYNSLHAF+I WP LSFDIVRD LGL+R
Sbjct: 14  ASSSSIPSVPAKVWRPGVDKLEEGEELQCDPTAYNSLHAFNISWPSLSFDIVRDTLGLVR 73

Query: 179 TEFPHTLYCIAGTQAENASWNYIGLFKLSKISGKRRALVPT 57
           TEFPHT+Y +AGTQAE ASWN IG++K+S ISGKRR L+P+
Sbjct: 74  TEFPHTIYFVAGTQAEKASWNSIGIYKISNISGKRRELLPS 114


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