BLASTX nr result
ID: Cimicifuga21_contig00015086
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00015086
(920 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAG28475.1|AF195548_1 putative histone deacetylase [Arabidops... 98 9e-34
ref|XP_002407932.1| histone deacetylase 1, 2 ,3, putative [Ixode... 92 5e-32
gb|AAK01712.1|AF332875_1 histone deacetylase HD1 [Oryza sativa I... 96 5e-31
ref|XP_576595.1| PREDICTED: histone deacetylase 1 [Rattus norveg... 94 6e-31
ref|XP_002093731.1| GE21462 [Drosophila yakuba] gi|194179832|gb|... 89 4e-30
>gb|AAG28475.1|AF195548_1 putative histone deacetylase [Arabidopsis thaliana]
Length = 471
Score = 98.2 bits (243), Expect(3) = 9e-34
Identities = 47/96 (48%), Positives = 67/96 (69%)
Frame = +2
Query: 125 IGDISEGEGQYYTLNVPLKPGIDDKSFQYLYQQILKEVMAQYNPETVVIQCGADFLADDI 304
I D+ +G+YY LNVPL G+DD+SF+ L++ ++++VM Y PE VV+QCGAD L+ D
Sbjct: 223 IRDVGAEKGKYYALNVPLNDGMDDESFRSLFRPLIQKVMEVYQPEAVVLQCGADSLSGDR 282
Query: 305 LGHFNLFVMVHASCVEYLRSFRIPHGIGRGGEATTL 412
LG FNL V HA C+ +LRS+ +P + GGE T+
Sbjct: 283 LGCFNLSVKGHADCLRFLRSYNVPLMV-LGGEGYTI 317
Score = 63.5 bits (153), Expect(3) = 9e-34
Identities = 32/60 (53%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Frame = +1
Query: 391 GGGGY---NVARCWCYETAVAVGLRPKDIDMLMPYNDYFGSFGANPLLEIKVAKVKNENT 561
GG GY NVARCWCYETAVAVG+ P D +PYN+YF FG + L + + ++N NT
Sbjct: 311 GGEGYTIRNVARCWCYETAVAVGVEP---DNKLPYNEYFEYFGPDYTLHVDPSPMENLNT 367
Score = 29.3 bits (64), Expect(3) = 9e-34
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +3
Query: 63 AFKTSNRVMTISFHEYDETF 122
AF T++RVMT+SFH++ + F
Sbjct: 198 AFYTTDRVMTVSFHKFGDFF 217
>ref|XP_002407932.1| histone deacetylase 1, 2 ,3, putative [Ixodes scapularis]
gi|215501103|gb|EEC10597.1| histone deacetylase 1, 2 ,3,
putative [Ixodes scapularis]
Length = 484
Score = 92.4 bits (228), Expect(3) = 5e-32
Identities = 41/90 (45%), Positives = 61/90 (67%), Gaps = 1/90 (1%)
Frame = +2
Query: 131 DISEGEGQYYTLNVPLKPGIDDKSFQYLYQQILKEVMAQYNPETVVIQCGADFLADDILG 310
DI G+G+YY +N PL+ GIDD+S++ ++Q ++ +VM Y P VV+QCGAD L+ D LG
Sbjct: 177 DIGAGKGKYYAVNFPLRDGIDDESYESIFQPLISKVMEMYQPSAVVLQCGADSLSGDRLG 236
Query: 311 HFNLFVMVHASCVEYLRSFRIP-HGIGRGG 397
FNL + H C E++R + +P +G GG
Sbjct: 237 CFNLTLKGHGKCAEFVRKYNLPLLQLGGGG 266
Score = 62.4 bits (150), Expect(3) = 5e-32
Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Frame = +1
Query: 391 GGGGY---NVARCWCYETAVAVGLRPKDIDMLMPYNDYFGSFGANPLLEIKVAKVKNENT 561
GGGGY NVARCW YETAVA+G+ DI +PYNDYF FG + L I + + N+NT
Sbjct: 263 GGGGYTIRNVARCWTYETAVALGV---DIANELPYNDYFEYFGPDFKLHISPSNMANQNT 319
Score = 30.4 bits (67), Expect(3) = 5e-32
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +3
Query: 63 AFKTSNRVMTISFHEYDETF 122
AF T++RVMT SFH+Y E F
Sbjct: 150 AFYTTDRVMTCSFHKYGEYF 169
>gb|AAK01712.1|AF332875_1 histone deacetylase HD1 [Oryza sativa Indica Group]
Length = 493
Score = 95.9 bits (237), Expect(3) = 5e-31
Identities = 47/91 (51%), Positives = 61/91 (67%)
Frame = +2
Query: 125 IGDISEGEGQYYTLNVPLKPGIDDKSFQYLYQQILKEVMAQYNPETVVIQCGADFLADDI 304
I DI EG+YY LNVPL GIDD S+Q +++ I+ +VM Y P VV+QCGAD L+ D
Sbjct: 223 IRDIGYSEGKYYCLNVPLDDGIDDDSYQSIFKPIISKVMEMYRPGAVVLQCGADSLSGDR 282
Query: 305 LGHFNLFVMVHASCVEYLRSFRIPHGIGRGG 397
LG FNL HA CV+++RSF +P + GG
Sbjct: 283 LGCFNLSGKGHAECVKFMRSFNVPLLLLGGG 313
Score = 56.6 bits (135), Expect(3) = 5e-31
Identities = 29/60 (48%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Frame = +1
Query: 391 GGGGY---NVARCWCYETAVAVGLRPKDIDMLMPYNDYFGSFGANPLLEIKVAKVKNENT 561
GGGGY NVARCWCYET VA+G ++ MP N+YF FG L + + ++N NT
Sbjct: 311 GGGGYAIRNVARCWCYETGVALG---HELTDKMPPNEYFEYFGPEYSLFVAASNMENRNT 367
Score = 29.3 bits (64), Expect(3) = 5e-31
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +3
Query: 63 AFKTSNRVMTISFHEYDETF 122
AF T++RVMT+SFH++ + F
Sbjct: 198 AFYTTDRVMTVSFHKFGDYF 217
>ref|XP_576595.1| PREDICTED: histone deacetylase 1 [Rattus norvegicus]
gi|109487379|ref|XP_001059685.1| PREDICTED: histone
deacetylase 1 [Rattus norvegicus]
Length = 484
Score = 94.4 bits (233), Expect(3) = 6e-31
Identities = 41/94 (43%), Positives = 66/94 (70%)
Frame = +2
Query: 131 DISEGEGQYYTLNVPLKPGIDDKSFQYLYQQILKEVMAQYNPETVVIQCGADFLADDILG 310
DI G+G+YY +N PL+ GIDD+S++ +++ ++ +VM + P VV+QCG+D L+ D LG
Sbjct: 215 DIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLG 274
Query: 311 HFNLFVMVHASCVEYLRSFRIPHGIGRGGEATTL 412
FNL + HA CVE+++SF +P + GG+ T+
Sbjct: 275 CFNLTIKGHAKCVEFVKSFNLPM-LMLGGDGYTI 307
Score = 55.1 bits (131), Expect(3) = 6e-31
Identities = 30/60 (50%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Frame = +1
Query: 391 GGGGY---NVARCWCYETAVAVGLRPKDIDMLMPYNDYFGSFGANPLLEIKVAKVKNENT 561
GG GY NVARCW YETAVA+ +I +PYNDYF FG + L I + + N+NT
Sbjct: 301 GGDGYTIHNVARCWTYETAVAL---DTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNT 357
Score = 32.0 bits (71), Expect(3) = 6e-31
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +3
Query: 63 AFKTSNRVMTISFHEYDETF 122
AF T++RVMT+SFH+Y E F
Sbjct: 188 AFYTTDRVMTVSFHKYGEYF 207
>ref|XP_002093731.1| GE21462 [Drosophila yakuba] gi|194179832|gb|EDW93443.1| GE21462
[Drosophila yakuba]
Length = 521
Score = 89.0 bits (219), Expect(3) = 4e-30
Identities = 39/92 (42%), Positives = 60/92 (65%)
Frame = +2
Query: 131 DISEGEGQYYTLNVPLKPGIDDKSFQYLYQQILKEVMAQYNPETVVIQCGADFLADDILG 310
DI G+G+YY +N+PL+ G+DD +++ ++ I+ +VM + P VV+QCGAD L D LG
Sbjct: 211 DIGAGKGKYYAVNIPLRDGMDDDAYESIFVPIISKVMETFQPAAVVLQCGADSLTGDRLG 270
Query: 311 HFNLFVMVHASCVEYLRSFRIPHGIGRGGEAT 406
FNL V H CVE+++ + +P + GG T
Sbjct: 271 CFNLTVKGHGKCVEFVKKYNLPFLMVGGGGYT 302
Score = 57.8 bits (138), Expect(3) = 4e-30
Identities = 30/60 (50%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Frame = +1
Query: 391 GGGGY---NVARCWCYETAVAVGLRPKDIDMLMPYNDYFGSFGANPLLEIKVAKVKNENT 561
GGGGY NV+RCW YET+VA+ + DI +PYNDYF FG + L I + + N+NT
Sbjct: 297 GGGGYTIRNVSRCWTYETSVALAV---DIANELPYNDYFEYFGPDFKLHISPSNMTNQNT 353
Score = 32.0 bits (71), Expect(3) = 4e-30
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +3
Query: 63 AFKTSNRVMTISFHEYDETF 122
AF T++RVMT+SFH+Y E F
Sbjct: 184 AFYTTDRVMTVSFHKYGEYF 203