BLASTX nr result

ID: Cimicifuga21_contig00015062 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015062
         (925 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263977.1| PREDICTED: dehydrodolichyl diphosphate synth...   257   2e-66
emb|CAN61413.1| hypothetical protein VITISV_029565 [Vitis vinifera]   257   3e-66
emb|CBI37101.3| unnamed protein product [Vitis vinifera]              252   1e-64
ref|XP_002307209.1| predicted protein [Populus trichocarpa] gi|2...   241   2e-61
ref|XP_004170399.1| PREDICTED: LOW QUALITY PROTEIN: dehydrodolic...   238   2e-60

>ref|XP_002263977.1| PREDICTED: dehydrodolichyl diphosphate synthase 6-like isoform 1
           [Vitis vinifera] gi|359480265|ref|XP_003632424.1|
           PREDICTED: dehydrodolichyl diphosphate synthase 6-like
           isoform 2 [Vitis vinifera]
          Length = 290

 Score =  257 bits (657), Expect = 2e-66
 Identities = 132/217 (60%), Positives = 159/217 (73%), Gaps = 14/217 (6%)
 Frame = -2

Query: 924 LGVKYVTIYAFSIDNFKRKPEEVEHVMDLMQDKIEGLLLDESIVKSYGIRVYFVGNLSLL 745
           LGVKYVTIYAFSI+NFKR+PEEV+ VMDLMQ+KIE L+ +ESI+  +G+RV+F+GNL LL
Sbjct: 76  LGVKYVTIYAFSIENFKRRPEEVQSVMDLMQEKIEQLINEESILNHFGVRVHFIGNLKLL 135

Query: 744 RDSVRLXXXXXXXXXAENDKAVLLICVAYTCTDEIVHAVEETCNERRDSSRVVSVKKNDK 565
              VRL         A N KAVL ICVAYT T+EI+HAVEE+C ++ D  R   +K +  
Sbjct: 136 SAPVRLAAERAMLVTACNSKAVLSICVAYTSTNEIMHAVEESCVKKWDEIR--ELKASGV 193

Query: 564 ECRLIKL--------------ADIERHMYTAMAPDPDILVRTSGETRLSNFLLWQTTYCY 427
           +C L KL               DIE+H+Y A+APDPDIL+RTSGETRLSNFLLWQ+ YCY
Sbjct: 194 DCGLTKLEGYEKGEAQDLINLTDIEKHLYMAVAPDPDILIRTSGETRLSNFLLWQSQYCY 253

Query: 426 LYSPSALWPEISIWHLVWGVLNYQRAQPYLDKKKKQL 316
           LYSPS LWPEI  WHL+W VLN+QR   YL+KKKKQL
Sbjct: 254 LYSPSVLWPEIGFWHLLWAVLNFQRNHFYLEKKKKQL 290


>emb|CAN61413.1| hypothetical protein VITISV_029565 [Vitis vinifera]
          Length = 384

 Score =  257 bits (656), Expect = 3e-66
 Identities = 131/215 (60%), Positives = 158/215 (73%), Gaps = 12/215 (5%)
 Frame = -2

Query: 924 LGVKYVTIYAFSIDNFKRKPEEVEHVMDLMQDKIEGLLLDESIVKSYGIRVYFVGNLSLL 745
           LGVKYVTIYAFSI+NFKR+PEEV+ VMDLMQ+KIE L+ +ESI+  +G+RV+F+GNL LL
Sbjct: 170 LGVKYVTIYAFSIENFKRRPEEVQSVMDLMQEKIEQLINEESILNHFGVRVHFIGNLKLL 229

Query: 744 RDSVRLXXXXXXXXXAENDKAVLLICVAYTCTDEIVHAVEETCNERRDSSRVVSVKKND- 568
              VRL         A N KAVL ICVAYT T+EI+HAVEE+C ++ D  R ++    D 
Sbjct: 230 SAPVRLAAERAMLVTACNSKAVLSICVAYTSTNEIMHAVEESCVKKWDEIRELNASGVDC 289

Query: 567 -----------KECRLIKLADIERHMYTAMAPDPDILVRTSGETRLSNFLLWQTTYCYLY 421
                      +   LI L DIE+H+Y A+APDPDIL+RTSGETRLSNFLLWQ+ YCYLY
Sbjct: 290 GLTKLEGYEKGEAQDLINLTDIEKHLYMAVAPDPDILIRTSGETRLSNFLLWQSQYCYLY 349

Query: 420 SPSALWPEISIWHLVWGVLNYQRAQPYLDKKKKQL 316
           SPS LWPEI  WHL+W VLN+QR   YL+KKKKQL
Sbjct: 350 SPSVLWPEIGFWHLLWAVLNFQRNHFYLEKKKKQL 384


>emb|CBI37101.3| unnamed protein product [Vitis vinifera]
          Length = 269

 Score =  252 bits (643), Expect = 1e-64
 Identities = 127/203 (62%), Positives = 152/203 (74%)
 Frame = -2

Query: 924 LGVKYVTIYAFSIDNFKRKPEEVEHVMDLMQDKIEGLLLDESIVKSYGIRVYFVGNLSLL 745
           LGVKYVTIYAFSI+NFKR+PEEV+ VMDLMQ+KIE L+ +ESI+  +G+RV+F+GNL LL
Sbjct: 76  LGVKYVTIYAFSIENFKRRPEEVQSVMDLMQEKIEQLINEESILNHFGVRVHFIGNLKLL 135

Query: 744 RDSVRLXXXXXXXXXAENDKAVLLICVAYTCTDEIVHAVEETCNERRDSSRVVSVKKNDK 565
              VRL         A N KAVL ICVAYT T+EI+HAVEE+C ++ D  R +     D 
Sbjct: 136 SAPVRLAAERAMLVTACNSKAVLSICVAYTSTNEIMHAVEESCVKKWDEIRELKASGVDY 195

Query: 564 ECRLIKLADIERHMYTAMAPDPDILVRTSGETRLSNFLLWQTTYCYLYSPSALWPEISIW 385
                    IE+H+Y A+APDPDIL+RTSGETRLSNFLLWQ+ YCYLYSPS LWPEI  W
Sbjct: 196 ---------IEKHLYMAVAPDPDILIRTSGETRLSNFLLWQSQYCYLYSPSVLWPEIGFW 246

Query: 384 HLVWGVLNYQRAQPYLDKKKKQL 316
           HL+W VLN+QR   YL+KKKKQL
Sbjct: 247 HLLWAVLNFQRNHFYLEKKKKQL 269


>ref|XP_002307209.1| predicted protein [Populus trichocarpa] gi|222856658|gb|EEE94205.1|
           predicted protein [Populus trichocarpa]
          Length = 287

 Score =  241 bits (614), Expect = 2e-61
 Identities = 119/211 (56%), Positives = 155/211 (73%), Gaps = 9/211 (4%)
 Frame = -2

Query: 924 LGVKYVTIYAFSIDNFKRKPEEVEHVMDLMQDKIEGLLLDESIVKSYGIRVYFVGNLSLL 745
           LGV YVTIYAFSI+NFKRKP+EV+++MDL+ +KIEGLL +ES+V  YGIRVYF+GNL LL
Sbjct: 76  LGVTYVTIYAFSIENFKRKPDEVQNLMDLILEKIEGLLKEESLVNKYGIRVYFIGNLKLL 135

Query: 744 RDSVRLXXXXXXXXXAENDKAVLLICVAYTCTDEIVHAVEETCNERRD------SSRVVS 583
              VR+         A N K VLLIC+AYT  DEIV AV E+C  + +      S +  S
Sbjct: 136 SKPVRVAAEKVMKATANNTKCVLLICIAYTSCDEIVQAVHESCKNKWEEIQPCNSHKSFS 195

Query: 582 VKKNDK---ECRLIKLADIERHMYTAMAPDPDILVRTSGETRLSNFLLWQTTYCYLYSPS 412
            +  +K   +  ++K+ DIE HMY ++AP+PDI++R+SGETRLSNFLLWQT+ C LYSP+
Sbjct: 196 GRVEEKLLVDLSILKVVDIESHMYMSVAPNPDIVIRSSGETRLSNFLLWQTSNCLLYSPN 255

Query: 411 ALWPEISIWHLVWGVLNYQRAQPYLDKKKKQ 319
           ALWP++ +WHLVW VL++QR   Y +KKKKQ
Sbjct: 256 ALWPDMRLWHLVWAVLDFQRNHSYFEKKKKQ 286


>ref|XP_004170399.1| PREDICTED: LOW QUALITY PROTEIN: dehydrodolichyl diphosphate
           synthase 6-like [Cucumis sativus]
          Length = 293

 Score =  238 bits (606), Expect = 2e-60
 Identities = 121/215 (56%), Positives = 148/215 (68%), Gaps = 12/215 (5%)
 Frame = -2

Query: 924 LGVKYVTIYAFSIDNFKRKPEEVEHVMDLMQDKIEGLLLDESIVKSYGIRVYFVGNLSLL 745
           LGVKYVTIYAFSIDNF+R PEEV+ VMDLM +K+E L+ +ES+V  YG+R+ F+GNL LL
Sbjct: 81  LGVKYVTIYAFSIDNFRRSPEEVQGVMDLMLEKVELLIREESLVNQYGVRLRFIGNLRLL 140

Query: 744 RDSVRLXXXXXXXXXAENDKAVLLICVAYTCTDEIVHAVEETCNERRDSSRV-------- 589
              VR            N+KA L IC+AYT TDEIVHAVE +C E+ +            
Sbjct: 141 SAPVRDAIERAMEATRNNNKAELSICIAYTSTDEIVHAVERSCEEKWNEMNSKTANGVGY 200

Query: 588 ----VSVKKNDKECRLIKLADIERHMYTAMAPDPDILVRTSGETRLSNFLLWQTTYCYLY 421
               + V  N      I LAD+E+HMYTA  PDPDIL+RTSGE RLSNFLLWQT+ CYLY
Sbjct: 201 GFGKLGVANNGDNS--ITLADVEKHMYTAATPDPDILIRTSGEARLSNFLLWQTSSCYLY 258

Query: 420 SPSALWPEISIWHLVWGVLNYQRAQPYLDKKKKQL 316
           SPSALWPEI+ W+ +W +LN+QR   +L KK+KQL
Sbjct: 259 SPSALWPEINFWYFLWAILNFQRNNHHLVKKRKQL 293


Top