BLASTX nr result

ID: Cimicifuga21_contig00015043 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015043
         (889 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325987.1| predicted protein [Populus trichocarpa] gi|2...   116   8e-24
gb|AFK40047.1| unknown [Lotus japonicus]                              114   2e-23
ref|XP_002327249.1| predicted protein [Populus trichocarpa] gi|2...   114   3e-23
gb|ABK94498.1| unknown [Populus trichocarpa]                          112   1e-22
ref|XP_002533873.1| conserved hypothetical protein [Ricinus comm...   111   3e-22

>ref|XP_002325987.1| predicted protein [Populus trichocarpa] gi|222862862|gb|EEF00369.1|
           predicted protein [Populus trichocarpa]
          Length = 208

 Score =  116 bits (290), Expect = 8e-24
 Identities = 68/128 (53%), Positives = 84/128 (65%), Gaps = 9/128 (7%)
 Frame = -3

Query: 773 SRVPFSWEQHPGIPKKWNHQSPKNSDTSLTMLPLPPSAASTTL-RRFNLDAIFTFGKKTT 597
           S VPFSWE  PGIPKK +++  K   +SL  LPLPP AAST++ +RFN   I    K + 
Sbjct: 68  SGVPFSWEHLPGIPKKQSYK--KKDSSSLKELPLPPPAASTSISKRFNSGEIGIRKKNSN 125

Query: 596 QE--RDPFAVALVECSKDIDHQEEV---EKYW---KVSRVISDRFGFIDRYTSCKKSCAV 441
               RDPF  ALV+CSKD D  E+      +W   KVSR  SDRFGFI+ YTSCKK+CAV
Sbjct: 126 DSFRRDPFFAALVQCSKDDDDDEQDLSNNNFWGGPKVSRRTSDRFGFINLYTSCKKTCAV 185

Query: 440 AESVILLP 417
           +ES++ LP
Sbjct: 186 SESIVYLP 193


>gb|AFK40047.1| unknown [Lotus japonicus]
          Length = 209

 Score =  114 bits (286), Expect = 2e-23
 Identities = 64/132 (48%), Positives = 83/132 (62%), Gaps = 8/132 (6%)
 Frame = -3

Query: 788 PSFQVSRVPFSWEQHPGIPKKWNHQSPKNSDTSLTMLPLPPSAASTTLRRFNLDAIFTFG 609
           P  ++S VPFSWE  PGIPKK N  S K  D+S+ +LPLPP   ++           T+ 
Sbjct: 65  PLIRLSGVPFSWEHLPGIPKKQN--SKKKQDSSMKLLPLPPPTTTSQHSSKRTTHEETWK 122

Query: 608 KKTTQ---ERDPFAVALVECSKDIDHQEEVEK--YW---KVSRVISDRFGFIDRYTSCKK 453
           K +T+   +RDPF  A+VECSKD D QEE+     W   KVSR +SDRFGF   Y SCK+
Sbjct: 123 KNSTKSVFQRDPFFAAMVECSKDDDDQEEITSGNLWNGAKVSRSVSDRFGFFSLYGSCKR 182

Query: 452 SCAVAESVILLP 417
           +CAV+ES++ LP
Sbjct: 183 TCAVSESLVFLP 194


>ref|XP_002327249.1| predicted protein [Populus trichocarpa] gi|222835619|gb|EEE74054.1|
           predicted protein [Populus trichocarpa]
          Length = 201

 Score =  114 bits (285), Expect = 3e-23
 Identities = 66/132 (50%), Positives = 81/132 (61%), Gaps = 6/132 (4%)
 Frame = -3

Query: 794 PHPSFQVSRVPFSWEQHPGIPKKWNHQSPKNSDTSLTMLPLPPSAASTTL-RRFNLDAIF 618
           P    Q S VPFSWE  PGIPKK   QS K  D++L  LPLPP AA  ++ RR N + I 
Sbjct: 58  PATPLQFSGVPFSWEHLPGIPKK---QSYKKKDSTLKALPLPPPAAPASISRRINSEEIG 114

Query: 617 TFGKKTTQE--RDPFAVALVECSKDIDHQEEVEKYW---KVSRVISDRFGFIDRYTSCKK 453
              K   +   RDPF  ALV+CSKD D   +   +W   KVSR ISDRFGF+  YTSCKK
Sbjct: 115 IRKKHNNESFRRDPFFAALVQCSKDDDDDYQGSDFWGGAKVSRSISDRFGFVSLYTSCKK 174

Query: 452 SCAVAESVILLP 417
           +  V++S++ LP
Sbjct: 175 TSDVSDSIVYLP 186


>gb|ABK94498.1| unknown [Populus trichocarpa]
          Length = 201

 Score =  112 bits (279), Expect = 1e-22
 Identities = 65/132 (49%), Positives = 80/132 (60%), Gaps = 6/132 (4%)
 Frame = -3

Query: 794 PHPSFQVSRVPFSWEQHPGIPKKWNHQSPKNSDTSLTMLPLPPSAASTTL-RRFNLDAIF 618
           P    Q S VPFSWE  PGIPKK   QS K  D++   LPLPP AA  ++ RR N + I 
Sbjct: 58  PATPLQFSGVPFSWEHLPGIPKK---QSYKKKDSTSKALPLPPPAAPASISRRINSEEIG 114

Query: 617 TFGKKTTQE--RDPFAVALVECSKDIDHQEEVEKYW---KVSRVISDRFGFIDRYTSCKK 453
              K   +   RDPF  ALV+CSKD D   +   +W   KVSR ISDRFGF+  YTSCKK
Sbjct: 115 IRKKHNNESFRRDPFFAALVQCSKDDDDDYQGSDFWGGAKVSRSISDRFGFVSLYTSCKK 174

Query: 452 SCAVAESVILLP 417
           +  V++S++ LP
Sbjct: 175 TSDVSDSIVYLP 186


>ref|XP_002533873.1| conserved hypothetical protein [Ricinus communis]
           gi|223526174|gb|EEF28504.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 201

 Score =  111 bits (277), Expect = 3e-22
 Identities = 68/131 (51%), Positives = 81/131 (61%), Gaps = 5/131 (3%)
 Frame = -3

Query: 794 PHPSFQVSRVPFSWEQHPGIPKKWNHQSPKNSDTSLT-MLPLPPSAASTTLRRFNLDAIF 618
           P    + S VPFSWE  PGIPKK +H   K  DT+LT +LPLPP A     +RF+     
Sbjct: 68  PATPLRFSGVPFSWEHLPGIPKKSSH---KKKDTALTKVLPLPPPAMPQCSKRFSE---- 120

Query: 617 TFGKKTTQERDPFAVALVECSKD-IDHQEEVEKYW---KVSRVISDRFGFIDRYTSCKKS 450
           +FG      RDPF  ALV CSKD  D  E     W   KVSR ISDRFGFI+ YTSCK++
Sbjct: 121 SFGN-----RDPFFAALVACSKDDSDDNESGSNLWSGAKVSRSISDRFGFINLYTSCKRT 175

Query: 449 CAVAESVILLP 417
           CAV+ES++ LP
Sbjct: 176 CAVSESIVYLP 186


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