BLASTX nr result

ID: Cimicifuga21_contig00015032 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015032
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39064.3| unnamed protein product [Vitis vinifera]              182   4e-47
ref|XP_002265256.2| PREDICTED: nucleolar GTP-binding protein 1-l...   182   4e-47
ref|XP_002302481.1| predicted protein [Populus trichocarpa] gi|2...   181   1e-45
ref|XP_002526509.1| nucleolar GTP-binding protein, putative [Ric...   174   9e-44
ref|XP_002889273.1| PDE318 [Arabidopsis lyrata subsp. lyrata] gi...   170   2e-42

>emb|CBI39064.3| unnamed protein product [Vitis vinifera]
          Length = 456

 Score =  182 bits (463), Expect(2) = 4e-47
 Identities = 90/104 (86%), Positives = 94/104 (90%)
 Frame = -1

Query: 413 ERLSEGMKKLEDIFKLEGKAVDDLLNIAKTLRAVPVVDLETPTLCLVGAPNVGKLSLVRI 234
           ERL EGMKKLEDIF  EGKAVDDLLNIAKTLRA+PVVDLETPTLCLVGAPNVGK SLVR+
Sbjct: 206 ERLGEGMKKLEDIFNHEGKAVDDLLNIAKTLRAMPVVDLETPTLCLVGAPNVGKSSLVRV 265

Query: 233 LSTGKPEVCNYPFTTRGILMGPITVNYQRFQVIDTPGLLKRYDD 102
           LSTGKPEVCNYPFTTRGILMG I  NY+ FQV DTPGLL R+DD
Sbjct: 266 LSTGKPEVCNYPFTTRGILMGHIAFNYRHFQVTDTPGLLNRHDD 309



 Score = 30.4 bits (67), Expect(2) = 4e-47
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = -2

Query: 43  DERNNLEKLTLAVL 2
           DERNNLEKLTLAVL
Sbjct: 309 DERNNLEKLTLAVL 322


>ref|XP_002265256.2| PREDICTED: nucleolar GTP-binding protein 1-like [Vitis vinifera]
          Length = 445

 Score =  182 bits (463), Expect(2) = 4e-47
 Identities = 90/104 (86%), Positives = 94/104 (90%)
 Frame = -1

Query: 413 ERLSEGMKKLEDIFKLEGKAVDDLLNIAKTLRAVPVVDLETPTLCLVGAPNVGKLSLVRI 234
           ERL EGMKKLEDIF  EGKAVDDLLNIAKTLRA+PVVDLETPTLCLVGAPNVGK SLVR+
Sbjct: 206 ERLGEGMKKLEDIFNHEGKAVDDLLNIAKTLRAMPVVDLETPTLCLVGAPNVGKSSLVRV 265

Query: 233 LSTGKPEVCNYPFTTRGILMGPITVNYQRFQVIDTPGLLKRYDD 102
           LSTGKPEVCNYPFTTRGILMG I  NY+ FQV DTPGLL R+DD
Sbjct: 266 LSTGKPEVCNYPFTTRGILMGHIAFNYRHFQVTDTPGLLNRHDD 309



 Score = 30.4 bits (67), Expect(2) = 4e-47
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = -2

Query: 43  DERNNLEKLTLAVL 2
           DERNNLEKLTLAVL
Sbjct: 309 DERNNLEKLTLAVL 322


>ref|XP_002302481.1| predicted protein [Populus trichocarpa] gi|222844207|gb|EEE81754.1|
           predicted protein [Populus trichocarpa]
          Length = 356

 Score =  181 bits (458), Expect(2) = 1e-45
 Identities = 87/104 (83%), Positives = 97/104 (93%)
 Frame = -1

Query: 413 ERLSEGMKKLEDIFKLEGKAVDDLLNIAKTLRAVPVVDLETPTLCLVGAPNVGKLSLVRI 234
           ERL+EG++KLE++FK EGKAVDDLLNIAKTLRA+PVVDLETPTLCLVGAPNVGK SLVR+
Sbjct: 117 ERLNEGLEKLEEVFKCEGKAVDDLLNIAKTLRAMPVVDLETPTLCLVGAPNVGKSSLVRV 176

Query: 233 LSTGKPEVCNYPFTTRGILMGPITVNYQRFQVIDTPGLLKRYDD 102
           LSTGKPEVCNYPFTTRGILMG I +N+Q FQV DTPGLLKR D+
Sbjct: 177 LSTGKPEVCNYPFTTRGILMGHIALNFQHFQVTDTPGLLKRCDE 220



 Score = 27.7 bits (60), Expect(2) = 1e-45
 Identities = 12/14 (85%), Positives = 14/14 (100%)
 Frame = -2

Query: 43  DERNNLEKLTLAVL 2
           ++RNNLEKLTLAVL
Sbjct: 220 EDRNNLEKLTLAVL 233


>ref|XP_002526509.1| nucleolar GTP-binding protein, putative [Ricinus communis]
           gi|223534184|gb|EEF35900.1| nucleolar GTP-binding
           protein, putative [Ricinus communis]
          Length = 443

 Score =  174 bits (441), Expect(2) = 9e-44
 Identities = 86/104 (82%), Positives = 95/104 (91%)
 Frame = -1

Query: 413 ERLSEGMKKLEDIFKLEGKAVDDLLNIAKTLRAVPVVDLETPTLCLVGAPNVGKLSLVRI 234
           E+L+EG +KLE+IFK EGKAVDDLLNIAKTLRA+PVV+LETPTLCLVGAPNVGK SLVRI
Sbjct: 208 EQLNEGREKLEEIFKCEGKAVDDLLNIAKTLRAMPVVNLETPTLCLVGAPNVGKSSLVRI 267

Query: 233 LSTGKPEVCNYPFTTRGILMGPITVNYQRFQVIDTPGLLKRYDD 102
           LSTGKPEVCNYPFTTRGILMG I  ++Q FQV DTPGLLKR D+
Sbjct: 268 LSTGKPEVCNYPFTTRGILMGHIAFDFQHFQVTDTPGLLKRCDE 311



 Score = 27.7 bits (60), Expect(2) = 9e-44
 Identities = 12/14 (85%), Positives = 14/14 (100%)
 Frame = -2

Query: 43  DERNNLEKLTLAVL 2
           ++RNNLEKLTLAVL
Sbjct: 311 EDRNNLEKLTLAVL 324


>ref|XP_002889273.1| PDE318 [Arabidopsis lyrata subsp. lyrata]
           gi|297335114|gb|EFH65532.1| PDE318 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 449

 Score =  170 bits (430), Expect(2) = 2e-42
 Identities = 82/104 (78%), Positives = 95/104 (91%)
 Frame = -1

Query: 413 ERLSEGMKKLEDIFKLEGKAVDDLLNIAKTLRAVPVVDLETPTLCLVGAPNVGKLSLVRI 234
           ERL+EG++KLE +F+ +G+AVDDLL+IAK LRA+PVVDLE PTLCLVGAPNVGK SLVRI
Sbjct: 213 ERLNEGVEKLELVFQQQGRAVDDLLSIAKVLRAMPVVDLEMPTLCLVGAPNVGKSSLVRI 272

Query: 233 LSTGKPEVCNYPFTTRGILMGPITVNYQRFQVIDTPGLLKRYDD 102
           LSTGKPE+CNYPFTTRGILMG I +NYQRFQV DTPGLL+R D+
Sbjct: 273 LSTGKPEICNYPFTTRGILMGHIVLNYQRFQVTDTPGLLRRCDE 316



 Score = 27.7 bits (60), Expect(2) = 2e-42
 Identities = 12/14 (85%), Positives = 14/14 (100%)
 Frame = -2

Query: 43  DERNNLEKLTLAVL 2
           ++RNNLEKLTLAVL
Sbjct: 316 EDRNNLEKLTLAVL 329


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