BLASTX nr result

ID: Cimicifuga21_contig00015023 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015023
         (766 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278252.1| PREDICTED: glycine cleavage system H protein...   243   3e-62
ref|NP_001237081.1| uncharacterized protein LOC100305815 [Glycin...   240   2e-61
ref|NP_001242407.1| uncharacterized protein LOC100792708 [Glycin...   238   1e-60
ref|XP_002269090.1| PREDICTED: glycine cleavage system H protein...   237   2e-60
ref|XP_003607890.1| Glycine cleavage system H protein [Medicago ...   236   5e-60

>ref|XP_002278252.1| PREDICTED: glycine cleavage system H protein, mitochondrial [Vitis
           vinifera] gi|297737954|emb|CBI27155.3| unnamed protein
           product [Vitis vinifera]
          Length = 154

 Score =  243 bits (621), Expect = 3e-62
 Identities = 113/139 (81%), Positives = 131/139 (94%)
 Frame = -1

Query: 712 ISVFHRGFSSVVKDLRYADSHEWVKVDGSSATIGITDHAQDHLGDVVYVELPEVGAAVTK 533
           +SVFHRGFSSVVKDL+YADSHEWVK+DG+SA +GITDHAQDHLGDVVYVELPE GAAV +
Sbjct: 16  LSVFHRGFSSVVKDLKYADSHEWVKIDGNSAIVGITDHAQDHLGDVVYVELPEAGAAVNQ 75

Query: 532 GNSFGAVESVKATSDINSPVSGKVVEVNEELSSSPGLINGSPYENGWIIKVELNNAAEIN 353
           G+ FGAVESVKATSDINSPVSGKVVEVNEEL+SSPGL+N SPYENGWIIKVE+++  E+N
Sbjct: 76  GSGFGAVESVKATSDINSPVSGKVVEVNEELNSSPGLVNASPYENGWIIKVEMSDTGELN 135

Query: 352 SLMDSDKYSTFCEEEDSQH 296
           SLMDS++Y+ FCEEED++H
Sbjct: 136 SLMDSEQYTKFCEEEDAKH 154


>ref|NP_001237081.1| uncharacterized protein LOC100305815 [Glycine max]
           gi|255626687|gb|ACU13688.1| unknown [Glycine max]
          Length = 155

 Score =  240 bits (613), Expect = 2e-61
 Identities = 115/139 (82%), Positives = 131/139 (94%)
 Frame = -1

Query: 712 ISVFHRGFSSVVKDLRYADSHEWVKVDGSSATIGITDHAQDHLGDVVYVELPEVGAAVTK 533
           ISVFHRGFS+VVKDL+YADSHEWVKVD +SAT+GITDHAQDHLGDVVYVELPEVGAAVT+
Sbjct: 17  ISVFHRGFSNVVKDLKYADSHEWVKVDENSATVGITDHAQDHLGDVVYVELPEVGAAVTQ 76

Query: 532 GNSFGAVESVKATSDINSPVSGKVVEVNEELSSSPGLINGSPYENGWIIKVELNNAAEIN 353
           G SFGA+ESVKATSDINSPVSGKVVEVNE L+SSP LIN SPY++GWIIKVE+++  E+N
Sbjct: 77  GGSFGALESVKATSDINSPVSGKVVEVNEALNSSPALINSSPYKDGWIIKVEISDNGELN 136

Query: 352 SLMDSDKYSTFCEEEDSQH 296
           +LMDSD+YS FCEEEDS+H
Sbjct: 137 NLMDSDQYSKFCEEEDSKH 155


>ref|NP_001242407.1| uncharacterized protein LOC100792708 [Glycine max]
           gi|255636316|gb|ACU18497.1| unknown [Glycine max]
          Length = 155

 Score =  238 bits (607), Expect = 1e-60
 Identities = 110/139 (79%), Positives = 130/139 (93%)
 Frame = -1

Query: 712 ISVFHRGFSSVVKDLRYADSHEWVKVDGSSATIGITDHAQDHLGDVVYVELPEVGAAVTK 533
           ISVFHRGFS+V+KD +Y DSHEWVKVDG+ ATIGITDHAQDHLGDVVYVELPEVGAAVT+
Sbjct: 17  ISVFHRGFSNVIKDFKYVDSHEWVKVDGNYATIGITDHAQDHLGDVVYVELPEVGAAVTQ 76

Query: 532 GNSFGAVESVKATSDINSPVSGKVVEVNEELSSSPGLINGSPYENGWIIKVELNNAAEIN 353
           G SFGA+ESVKAT+DINSP+SG+VVEVNE L+SSP L+N SPY+NGWIIKVE+N++ E+N
Sbjct: 77  GGSFGALESVKATTDINSPISGEVVEVNEALNSSPALVNSSPYKNGWIIKVEINDSGELN 136

Query: 352 SLMDSDKYSTFCEEEDSQH 296
           +LMDS++YS FCEEEDS+H
Sbjct: 137 NLMDSEQYSKFCEEEDSKH 155


>ref|XP_002269090.1| PREDICTED: glycine cleavage system H protein, mitochondrial [Vitis
           vinifera] gi|296087512|emb|CBI34101.3| unnamed protein
           product [Vitis vinifera]
          Length = 155

 Score =  237 bits (605), Expect = 2e-60
 Identities = 115/139 (82%), Positives = 128/139 (92%)
 Frame = -1

Query: 712 ISVFHRGFSSVVKDLRYADSHEWVKVDGSSATIGITDHAQDHLGDVVYVELPEVGAAVTK 533
           ISV  R FSSVVKDL+Y DSHEW KVDG+ ATIGITDHAQDHLGDVVYVELPEVGA V++
Sbjct: 17  ISVPFRAFSSVVKDLKYVDSHEWAKVDGNLATIGITDHAQDHLGDVVYVELPEVGANVSQ 76

Query: 532 GNSFGAVESVKATSDINSPVSGKVVEVNEELSSSPGLINGSPYENGWIIKVELNNAAEIN 353
           G SFGAVESVKATSDINSPVSGKVVEVNEELSSSPGL+NGSPYE GWIIKVE++N +E+N
Sbjct: 77  GGSFGAVESVKATSDINSPVSGKVVEVNEELSSSPGLVNGSPYEKGWIIKVEISNPSELN 136

Query: 352 SLMDSDKYSTFCEEEDSQH 296
           SLMDS++YS FCEEED++H
Sbjct: 137 SLMDSEQYSKFCEEEDAKH 155


>ref|XP_003607890.1| Glycine cleavage system H protein [Medicago truncatula]
           gi|85719356|gb|ABC75361.1| 2-oxo acid dehydrogenase,
           lipoyl-binding site [Medicago truncatula]
           gi|355508945|gb|AES90087.1| Glycine cleavage system H
           protein [Medicago truncatula]
           gi|388498488|gb|AFK37310.1| unknown [Medicago
           truncatula]
          Length = 155

 Score =  236 bits (601), Expect = 5e-60
 Identities = 110/139 (79%), Positives = 128/139 (92%)
 Frame = -1

Query: 712 ISVFHRGFSSVVKDLRYADSHEWVKVDGSSATIGITDHAQDHLGDVVYVELPEVGAAVTK 533
           IS+FHR FS+V+ +L+YADSHEWVKVDG SATIGITDHAQDHLGDVVYVELPEVG AVT+
Sbjct: 17  ISLFHRSFSNVLNNLKYADSHEWVKVDGKSATIGITDHAQDHLGDVVYVELPEVGTAVTQ 76

Query: 532 GNSFGAVESVKATSDINSPVSGKVVEVNEELSSSPGLINGSPYENGWIIKVELNNAAEIN 353
           G+ FGAVESVKATSDINSPVSGKV+EVNEELS+SP L+N SPYENGWIIKVE++++ E++
Sbjct: 77  GDGFGAVESVKATSDINSPVSGKVIEVNEELSNSPALVNSSPYENGWIIKVEMSDSGELD 136

Query: 352 SLMDSDKYSTFCEEEDSQH 296
            LMDS+KY+ FCEEEDS H
Sbjct: 137 KLMDSEKYTKFCEEEDSSH 155


Top