BLASTX nr result
ID: Cimicifuga21_contig00014998
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00014998 (1367 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002307899.1| predicted protein [Populus trichocarpa] gi|2... 105 3e-20 emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera] 87 8e-15 ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2... 86 2e-14 ref|XP_002335874.1| predicted protein [Populus trichocarpa] gi|2... 86 2e-14 ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ... 85 4e-14 >ref|XP_002307899.1| predicted protein [Populus trichocarpa] gi|222853875|gb|EEE91422.1| predicted protein [Populus trichocarpa] Length = 359 Score = 105 bits (262), Expect = 3e-20 Identities = 70/205 (34%), Positives = 107/205 (52%), Gaps = 17/205 (8%) Frame = -3 Query: 660 LTDIMFYEGMLYALTVQH-ILVKFNLEEVQPVGHTLNMIPMD---RPAGGCCNSWGYLVE 493 +TDI FY G LYA++ + I + + L+ +P++ + G C + YLVE Sbjct: 168 ITDITFYRGKLYAMSYYNAIYICDEARDGSIAWRRLDTLPLNLKKKERGRC--DFRYLVE 225 Query: 492 SG-GELLMVYRIRDVVNTKDLYXXXXXXXXXXXLDRSSDVLRWIKVESLGDEMIFLGRNS 316 S GELLMV R+RD + D +SD +W+++E++G+++IFLGRN Sbjct: 226 SNNGELLMVVRVRD-------HGFTIQFIVFKLDDETSDPAKWVRLENIGNQIIFLGRNH 278 Query: 315 SMSISAKGVPGFQGNCIYFSDDGYPFFWFGGRNRLLTC-----SDNGVFHLGDGHIDSLF 151 + + A PGF+GNC+Y+S D + F R+L +D GV+ L + F Sbjct: 279 TKCVPAIDFPGFEGNCVYYSCDLWNHF------RVLPMDQRDYADMGVYGLERRGKEEFF 332 Query: 150 P-------PDHSHSFKFPTIWVTPN 97 P P+ HSFK+P IW+TPN Sbjct: 333 PENYGAFMPNSEHSFKYPPIWITPN 357 >emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera] Length = 389 Score = 87.4 bits (215), Expect = 8e-15 Identities = 65/190 (34%), Positives = 91/190 (47%), Gaps = 4/190 (2%) Frame = -3 Query: 654 DIMFYEGMLYALTVQHILVKFNLEEVQPVGHTLNMIPMDRPAGGCCNSWGYLVESGGELL 475 D++F+ G+ YA+ + ++ P +++I M + GG YLVESG ELL Sbjct: 211 DVIFHRGLFYAVNKYGSIAVCDVSGSSP---RVSIIEMPQQFGGDLQ---YLVESGEELL 264 Query: 474 MVYRIRDVVNT--KDLYXXXXXXXXXXXLDRSSDVLRWIKVESLGDEMIFLGRNSSMSIS 301 +V R D+ D S RW V SLGD +FLG N S+S+S Sbjct: 265 LVTRYLDLTYDVEXDQTSLIYRTTRFQVCRLDSKAPRWEVVSSLGDRALFLGENLSLSLS 324 Query: 300 AKGVPGFQGNCIYFSDDGYP--FFWFGGRNRLLTCSDNGVFHLGDGHIDSLFPPDHSHSF 127 + PG +GNCIY++DD + GG D G+F+L DG I+ L P H Sbjct: 325 SVDFPGCKGNCIYYTDDYSEDNYDGIGGE------QDLGIFNLEDGSIEPL-PCSHFRIR 377 Query: 126 KFPTIWVTPN 97 P +WVTPN Sbjct: 378 WPPPLWVTPN 387 Score = 61.6 bits (148), Expect = 5e-07 Identities = 38/97 (39%), Positives = 52/97 (53%), Gaps = 3/97 (3%) Frame = -3 Query: 1272 DYIRFGAVCRTWRSMAAENEGYL-HQLPWLMISQDKDTQTGE-FFSLSEGKTYNLKLTEM 1099 DY+RF AVC WR+ + +L QLPWLM+ Q + T FFSLS K + L+L E Sbjct: 24 DYVRFRAVCHNWRASVPKTPHHLPTQLPWLMLPQSQPHHTHRPFFSLSLNKFHFLQLPEA 83 Query: 1098 ASESYCTGSSQGCLIMAHQQGN-FLFNPFSGRQTSLP 991 + GSS G L++ + FL NP + + LP Sbjct: 84 SHRRRRRGSSHGWLLILDEAPEIFLLNPLTRSKVHLP 120 >ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1| predicted protein [Populus trichocarpa] Length = 393 Score = 86.3 bits (212), Expect = 2e-14 Identities = 61/189 (32%), Positives = 98/189 (51%), Gaps = 3/189 (1%) Frame = -3 Query: 654 DIMFYEGMLYALTVQHILVKFNLEEVQPVGHTLNMIPMDRPAGGCCNSWGYLVESGGELL 475 D++++ G+ YA+ +V ++ P ++ I R GG YLV SG LL Sbjct: 215 DVIYFNGLFYAVNKAGQIVVCDVNGNSP---KVSFIETPRQIGG---DMQYLVSSGDGLL 268 Query: 474 MVYRIRDVVNTKDLYXXXXXXXXXXXLDRSSDVLRWIKVESLGDEMIFLGRNSSMSISAK 295 +V R D+ D++ LD + RW +V SLGD M+F+G NSS+++SA Sbjct: 269 LVTRYLDLDVEFDIFIYKTARFEVFKLDLNGP--RWERVTSLGDMMLFIGENSSLALSAS 326 Query: 294 GVPGFQGNCIYFSDDGYPFFWFGGRNRLLTCSDNGVFHLGDGHIDSL--FPPDHSHSFKF 121 G+ G G+CIY++DD Y + G + D G+F L DG I+ L +P + ++ Sbjct: 327 GLSGCMGDCIYYTDD-YSANNYDGH---IGEHDLGIFKLSDGSIEPLPCYPRNSYSRLQW 382 Query: 120 -PTIWVTPN 97 P +W++PN Sbjct: 383 PPPLWISPN 391 Score = 62.0 bits (149), Expect = 3e-07 Identities = 37/99 (37%), Positives = 53/99 (53%), Gaps = 4/99 (4%) Frame = -3 Query: 1272 DYIRFGAVCRTWRSMAAENEGYLH-QLPWLMISQDKDTQTG--EFFSLSEGKTYNLKLTE 1102 DY+ F AVC W+S + +L QLPWL++ Q + Q+ FF+LS K ++L L E Sbjct: 25 DYLHFQAVCHAWKSSIPKTPNHLPPQLPWLLLPQSQSNQSSYRAFFNLSTYKFHSLNLPE 84 Query: 1101 MASESYCTGSSQGCLIMAHQQGNFL-FNPFSGRQTSLPA 988 + GSS G LI+ + L NP + R+ LPA Sbjct: 85 ASHRKKHCGSSHGWLIILDDSPSILVINPLTRRKIHLPA 123 >ref|XP_002335874.1| predicted protein [Populus trichocarpa] gi|222835929|gb|EEE74350.1| predicted protein [Populus trichocarpa] Length = 229 Score = 85.9 bits (211), Expect = 2e-14 Identities = 47/126 (37%), Positives = 68/126 (53%), Gaps = 1/126 (0%) Frame = -3 Query: 1296 ILPRLGLKDYIRFGAVCRTWRSMAAENEGYLHQLPWLMISQDKDTQTGEFFSLSEGKTYN 1117 I ++ + Y RF C WR + + H LPWLM+S D++ +T FF + + K Y Sbjct: 22 IASKVSVAGYHRFLLFCTAWRRTTSMRPPFSH-LPWLMLSNDRNKKTRGFFCIHDSKFYQ 80 Query: 1116 LKLTEMASESYCTGSSQGCLIMAHQ-QGNFLFNPFSGRQTSLPAQYVPPDTRWGKNPRSL 940 + L + S+C SS G IMAH+ +G+FLFNPFSG + LP Y P + P S Sbjct: 81 IPLPRVVRRSWCARSSYGWFIMAHKTRGDFLFNPFSGVRIPLPTHYNQPYS--FVRPASN 138 Query: 939 PFYFKK 922 P++ K Sbjct: 139 PYFMTK 144 >ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera] Length = 389 Score = 85.1 bits (209), Expect = 4e-14 Identities = 64/190 (33%), Positives = 90/190 (47%), Gaps = 4/190 (2%) Frame = -3 Query: 654 DIMFYEGMLYALTVQHILVKFNLEEVQPVGHTLNMIPMDRPAGGCCNSWGYLVESGGELL 475 D++F+ G+ YA+ + ++ P +++I M + GG YLVESG ELL Sbjct: 211 DVIFHRGLFYAVNKYGSIAVCDVSGSSP---RVSIIEMPQQFGGDLQ---YLVESGEELL 264 Query: 474 MVYRIRDVVNT--KDLYXXXXXXXXXXXLDRSSDVLRWIKVESLGDEMIFLGRNSSMSIS 301 +V R D+ D RW V SLGD +FLG N S+S+S Sbjct: 265 LVTRYLDLTYDVEPDQTSLIYRTTRFQVCRLDLKAPRWEVVSSLGDRALFLGENLSLSLS 324 Query: 300 AKGVPGFQGNCIYFSDDGYP--FFWFGGRNRLLTCSDNGVFHLGDGHIDSLFPPDHSHSF 127 + PG +GNCIY++DD + GG D G+F+L DG I+ L P H Sbjct: 325 SVDFPGCKGNCIYYTDDYSEDNYDGIGGE------QDLGIFNLEDGSIEPL-PCSHFRIR 377 Query: 126 KFPTIWVTPN 97 P +WVTPN Sbjct: 378 WPPPLWVTPN 387 Score = 61.6 bits (148), Expect = 5e-07 Identities = 38/97 (39%), Positives = 52/97 (53%), Gaps = 3/97 (3%) Frame = -3 Query: 1272 DYIRFGAVCRTWRSMAAENEGYL-HQLPWLMISQDKDTQTGE-FFSLSEGKTYNLKLTEM 1099 DY+RF AVC WR+ + +L QLPWLM+ Q + T FFSLS K + L+L E Sbjct: 24 DYVRFRAVCHNWRASVPKTPHHLPTQLPWLMLPQSQPHHTHRPFFSLSLNKFHFLQLPEA 83 Query: 1098 ASESYCTGSSQGCLIMAHQQGN-FLFNPFSGRQTSLP 991 + GSS G L++ + FL NP + + LP Sbjct: 84 SHRRRRRGSSHGWLLILDEAPEIFLLNPLTRSKVHLP 120