BLASTX nr result

ID: Cimicifuga21_contig00014998 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00014998
         (1367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307899.1| predicted protein [Populus trichocarpa] gi|2...   105   3e-20
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]    87   8e-15
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...    86   2e-14
ref|XP_002335874.1| predicted protein [Populus trichocarpa] gi|2...    86   2e-14
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    85   4e-14

>ref|XP_002307899.1| predicted protein [Populus trichocarpa] gi|222853875|gb|EEE91422.1|
           predicted protein [Populus trichocarpa]
          Length = 359

 Score =  105 bits (262), Expect = 3e-20
 Identities = 70/205 (34%), Positives = 107/205 (52%), Gaps = 17/205 (8%)
 Frame = -3

Query: 660 LTDIMFYEGMLYALTVQH-ILVKFNLEEVQPVGHTLNMIPMD---RPAGGCCNSWGYLVE 493
           +TDI FY G LYA++  + I +     +       L+ +P++   +  G C   + YLVE
Sbjct: 168 ITDITFYRGKLYAMSYYNAIYICDEARDGSIAWRRLDTLPLNLKKKERGRC--DFRYLVE 225

Query: 492 SG-GELLMVYRIRDVVNTKDLYXXXXXXXXXXXLDRSSDVLRWIKVESLGDEMIFLGRNS 316
           S  GELLMV R+RD       +            D +SD  +W+++E++G+++IFLGRN 
Sbjct: 226 SNNGELLMVVRVRD-------HGFTIQFIVFKLDDETSDPAKWVRLENIGNQIIFLGRNH 278

Query: 315 SMSISAKGVPGFQGNCIYFSDDGYPFFWFGGRNRLLTC-----SDNGVFHLGDGHIDSLF 151
           +  + A   PGF+GNC+Y+S D +  F      R+L       +D GV+ L     +  F
Sbjct: 279 TKCVPAIDFPGFEGNCVYYSCDLWNHF------RVLPMDQRDYADMGVYGLERRGKEEFF 332

Query: 150 P-------PDHSHSFKFPTIWVTPN 97
           P       P+  HSFK+P IW+TPN
Sbjct: 333 PENYGAFMPNSEHSFKYPPIWITPN 357


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score = 87.4 bits (215), Expect = 8e-15
 Identities = 65/190 (34%), Positives = 91/190 (47%), Gaps = 4/190 (2%)
 Frame = -3

Query: 654 DIMFYEGMLYALTVQHILVKFNLEEVQPVGHTLNMIPMDRPAGGCCNSWGYLVESGGELL 475
           D++F+ G+ YA+     +   ++    P    +++I M +  GG      YLVESG ELL
Sbjct: 211 DVIFHRGLFYAVNKYGSIAVCDVSGSSP---RVSIIEMPQQFGGDLQ---YLVESGEELL 264

Query: 474 MVYRIRDVVNT--KDLYXXXXXXXXXXXLDRSSDVLRWIKVESLGDEMIFLGRNSSMSIS 301
           +V R  D+      D                 S   RW  V SLGD  +FLG N S+S+S
Sbjct: 265 LVTRYLDLTYDVEXDQTSLIYRTTRFQVCRLDSKAPRWEVVSSLGDRALFLGENLSLSLS 324

Query: 300 AKGVPGFQGNCIYFSDDGYP--FFWFGGRNRLLTCSDNGVFHLGDGHIDSLFPPDHSHSF 127
           +   PG +GNCIY++DD     +   GG        D G+F+L DG I+ L P  H    
Sbjct: 325 SVDFPGCKGNCIYYTDDYSEDNYDGIGGE------QDLGIFNLEDGSIEPL-PCSHFRIR 377

Query: 126 KFPTIWVTPN 97
             P +WVTPN
Sbjct: 378 WPPPLWVTPN 387



 Score = 61.6 bits (148), Expect = 5e-07
 Identities = 38/97 (39%), Positives = 52/97 (53%), Gaps = 3/97 (3%)
 Frame = -3

Query: 1272 DYIRFGAVCRTWRSMAAENEGYL-HQLPWLMISQDKDTQTGE-FFSLSEGKTYNLKLTEM 1099
            DY+RF AVC  WR+   +   +L  QLPWLM+ Q +   T   FFSLS  K + L+L E 
Sbjct: 24   DYVRFRAVCHNWRASVPKTPHHLPTQLPWLMLPQSQPHHTHRPFFSLSLNKFHFLQLPEA 83

Query: 1098 ASESYCTGSSQGCLIMAHQQGN-FLFNPFSGRQTSLP 991
            +      GSS G L++  +    FL NP +  +  LP
Sbjct: 84   SHRRRRRGSSHGWLLILDEAPEIFLLNPLTRSKVHLP 120


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score = 86.3 bits (212), Expect = 2e-14
 Identities = 61/189 (32%), Positives = 98/189 (51%), Gaps = 3/189 (1%)
 Frame = -3

Query: 654 DIMFYEGMLYALTVQHILVKFNLEEVQPVGHTLNMIPMDRPAGGCCNSWGYLVESGGELL 475
           D++++ G+ YA+     +V  ++    P    ++ I   R  GG      YLV SG  LL
Sbjct: 215 DVIYFNGLFYAVNKAGQIVVCDVNGNSP---KVSFIETPRQIGG---DMQYLVSSGDGLL 268

Query: 474 MVYRIRDVVNTKDLYXXXXXXXXXXXLDRSSDVLRWIKVESLGDEMIFLGRNSSMSISAK 295
           +V R  D+    D++           LD +    RW +V SLGD M+F+G NSS+++SA 
Sbjct: 269 LVTRYLDLDVEFDIFIYKTARFEVFKLDLNGP--RWERVTSLGDMMLFIGENSSLALSAS 326

Query: 294 GVPGFQGNCIYFSDDGYPFFWFGGRNRLLTCSDNGVFHLGDGHIDSL--FPPDHSHSFKF 121
           G+ G  G+CIY++DD Y    + G    +   D G+F L DG I+ L  +P +     ++
Sbjct: 327 GLSGCMGDCIYYTDD-YSANNYDGH---IGEHDLGIFKLSDGSIEPLPCYPRNSYSRLQW 382

Query: 120 -PTIWVTPN 97
            P +W++PN
Sbjct: 383 PPPLWISPN 391



 Score = 62.0 bits (149), Expect = 3e-07
 Identities = 37/99 (37%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
 Frame = -3

Query: 1272 DYIRFGAVCRTWRSMAAENEGYLH-QLPWLMISQDKDTQTG--EFFSLSEGKTYNLKLTE 1102
            DY+ F AVC  W+S   +   +L  QLPWL++ Q +  Q+    FF+LS  K ++L L E
Sbjct: 25   DYLHFQAVCHAWKSSIPKTPNHLPPQLPWLLLPQSQSNQSSYRAFFNLSTYKFHSLNLPE 84

Query: 1101 MASESYCTGSSQGCLIMAHQQGNFL-FNPFSGRQTSLPA 988
             +      GSS G LI+     + L  NP + R+  LPA
Sbjct: 85   ASHRKKHCGSSHGWLIILDDSPSILVINPLTRRKIHLPA 123


>ref|XP_002335874.1| predicted protein [Populus trichocarpa] gi|222835929|gb|EEE74350.1|
            predicted protein [Populus trichocarpa]
          Length = 229

 Score = 85.9 bits (211), Expect = 2e-14
 Identities = 47/126 (37%), Positives = 68/126 (53%), Gaps = 1/126 (0%)
 Frame = -3

Query: 1296 ILPRLGLKDYIRFGAVCRTWRSMAAENEGYLHQLPWLMISQDKDTQTGEFFSLSEGKTYN 1117
            I  ++ +  Y RF   C  WR   +    + H LPWLM+S D++ +T  FF + + K Y 
Sbjct: 22   IASKVSVAGYHRFLLFCTAWRRTTSMRPPFSH-LPWLMLSNDRNKKTRGFFCIHDSKFYQ 80

Query: 1116 LKLTEMASESYCTGSSQGCLIMAHQ-QGNFLFNPFSGRQTSLPAQYVPPDTRWGKNPRSL 940
            + L  +   S+C  SS G  IMAH+ +G+FLFNPFSG +  LP  Y  P +     P S 
Sbjct: 81   IPLPRVVRRSWCARSSYGWFIMAHKTRGDFLFNPFSGVRIPLPTHYNQPYS--FVRPASN 138

Query: 939  PFYFKK 922
            P++  K
Sbjct: 139  PYFMTK 144


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score = 85.1 bits (209), Expect = 4e-14
 Identities = 64/190 (33%), Positives = 90/190 (47%), Gaps = 4/190 (2%)
 Frame = -3

Query: 654 DIMFYEGMLYALTVQHILVKFNLEEVQPVGHTLNMIPMDRPAGGCCNSWGYLVESGGELL 475
           D++F+ G+ YA+     +   ++    P    +++I M +  GG      YLVESG ELL
Sbjct: 211 DVIFHRGLFYAVNKYGSIAVCDVSGSSP---RVSIIEMPQQFGGDLQ---YLVESGEELL 264

Query: 474 MVYRIRDVVNT--KDLYXXXXXXXXXXXLDRSSDVLRWIKVESLGDEMIFLGRNSSMSIS 301
           +V R  D+      D                     RW  V SLGD  +FLG N S+S+S
Sbjct: 265 LVTRYLDLTYDVEPDQTSLIYRTTRFQVCRLDLKAPRWEVVSSLGDRALFLGENLSLSLS 324

Query: 300 AKGVPGFQGNCIYFSDDGYP--FFWFGGRNRLLTCSDNGVFHLGDGHIDSLFPPDHSHSF 127
           +   PG +GNCIY++DD     +   GG        D G+F+L DG I+ L P  H    
Sbjct: 325 SVDFPGCKGNCIYYTDDYSEDNYDGIGGE------QDLGIFNLEDGSIEPL-PCSHFRIR 377

Query: 126 KFPTIWVTPN 97
             P +WVTPN
Sbjct: 378 WPPPLWVTPN 387



 Score = 61.6 bits (148), Expect = 5e-07
 Identities = 38/97 (39%), Positives = 52/97 (53%), Gaps = 3/97 (3%)
 Frame = -3

Query: 1272 DYIRFGAVCRTWRSMAAENEGYL-HQLPWLMISQDKDTQTGE-FFSLSEGKTYNLKLTEM 1099
            DY+RF AVC  WR+   +   +L  QLPWLM+ Q +   T   FFSLS  K + L+L E 
Sbjct: 24   DYVRFRAVCHNWRASVPKTPHHLPTQLPWLMLPQSQPHHTHRPFFSLSLNKFHFLQLPEA 83

Query: 1098 ASESYCTGSSQGCLIMAHQQGN-FLFNPFSGRQTSLP 991
            +      GSS G L++  +    FL NP +  +  LP
Sbjct: 84   SHRRRRRGSSHGWLLILDEAPEIFLLNPLTRSKVHLP 120


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