BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00014988
         (1407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277241.1| PREDICTED: ribonuclease Z, chloroplastic [Vi...   499   e-139
ref|XP_002528949.1| ribonuclease z, chloroplast, putative [Ricin...   484   e-134
ref|XP_004156084.1| PREDICTED: ribonuclease Z, chloroplastic-lik...   469   e-130
ref|XP_004140131.1| PREDICTED: ribonuclease Z, chloroplastic-lik...   469   e-130
ref|XP_003519435.1| PREDICTED: ribonuclease Z, chloroplastic-lik...   467   e-129

>ref|XP_002277241.1| PREDICTED: ribonuclease Z, chloroplastic [Vitis vinifera]
            gi|297739240|emb|CBI28891.3| unnamed protein product
            [Vitis vinifera]
          Length = 354

 Score =  499 bits (1286), Expect = e-139
 Identities = 253/357 (70%), Positives = 289/357 (80%), Gaps = 1/357 (0%)
 Frame = +1

Query: 163  MQTSLCITISTSPLFFPPQIPTPKFPLSTPTHILSTPSHKDHHPLFAHRGSSSGFLSAVD 342
            MQ SL  + S  P   P   PTP+ PL+ P      P  K +    + R   SG+LS + 
Sbjct: 1    MQISLPFSTSKVPYLSPLPNPTPQPPLTIPK-----PHPKSYITAHSSRPKGSGYLSLIG 55

Query: 343  RVIEEEE-YRKARAQMNRKGVDLEGYLIEGISVGGHETCVIVPRLNAAFDIGRCPSRAIQ 519
            R IEEEE YRKARA++ R GVDLEGY IEGIS+GGHETCVI+P L +AFDIGRCPSRAIQ
Sbjct: 56   RAIEEEEEYRKARAEVARNGVDLEGYSIEGISIGGHETCVIIPELKSAFDIGRCPSRAIQ 115

Query: 520  QDFLFITHAHLDHIGGLPMYVATRGLYSLKPPIIFVPPCIKEDVEKLFEIHRKMSQXXXX 699
            Q+FLFITHAHLDHIGGLPMYVATRGLY+LKPP IFVPPCIKEDVEKLF+IHR +SQ    
Sbjct: 116  QNFLFITHAHLDHIGGLPMYVATRGLYNLKPPTIFVPPCIKEDVEKLFDIHRALSQVELK 175

Query: 700  XXXXXXXXGDTYELRNDLVVRSFKTHHVIPSQGYVIYSIRKKLKKQYTHLKDKGKQIEKL 879
                    G+TYE+RN+LVVR FKTHHVIPSQGYVIY++RKKLKKQY HL  KGKQIEKL
Sbjct: 176  LDLVALDVGETYEMRNNLVVRPFKTHHVIPSQGYVIYTVRKKLKKQYIHL--KGKQIEKL 233

Query: 880  KKSGVEITDVILSPEMAFTGDTTSDFLLDPRNADALRAKILVTEATFLDGGISIEHARQH 1059
            K SG+EITD ILSPE+AFTGDT SDF+L+PRNADALRAK+L+TEATFLD GISI+HAR+H
Sbjct: 234  KNSGIEITDTILSPEVAFTGDTRSDFMLEPRNADALRAKVLITEATFLDNGISIDHAREH 293

Query: 1060 GHTHLFELMEHAEWIRNKAILLTHFSSRYKKEDIDEAVSKLQQRVSAKVVALTEGFK 1230
            GHTHLFE++E+AEWIRNKA+LLTHFSSRY  EDI +AVSKLQ +VSA+VV L EGFK
Sbjct: 294  GHTHLFEIIENAEWIRNKAVLLTHFSSRYHIEDIRKAVSKLQSKVSARVVPLMEGFK 350


>ref|XP_002528949.1| ribonuclease z, chloroplast, putative [Ricinus communis]
            gi|223531595|gb|EEF33423.1| ribonuclease z, chloroplast,
            putative [Ricinus communis]
          Length = 361

 Score =  484 bits (1245), Expect = e-134
 Identities = 247/361 (68%), Positives = 287/361 (79%), Gaps = 3/361 (0%)
 Frame = +1

Query: 163  MQTSLCITISTSPLFFPPQIPTPKFPLSTPTHILSTPSHKDH--HPLFAHRGSSSGFLSA 336
            MQTSL I+ S  P  FP   P    P +T T        + H   P+      S+G+LSA
Sbjct: 1    MQTSLPISHSKFPSIFPFNHPISHKPTTTRTTTEHQYPFQTHIKKPIGPTSLKSTGYLSA 60

Query: 337  VDRVIEEEE-YRKARAQMNRKGVDLEGYLIEGISVGGHETCVIVPRLNAAFDIGRCPSRA 513
            + RVIEEEE YRKARA + RKG+DLEGY IEG+S+GG ETC+I+P    AFDIGRCPSRA
Sbjct: 61   IGRVIEEEEEYRKARAAVIRKGIDLEGYSIEGLSIGGQETCLIIPEFKCAFDIGRCPSRA 120

Query: 514  IQQDFLFITHAHLDHIGGLPMYVATRGLYSLKPPIIFVPPCIKEDVEKLFEIHRKMSQXX 693
            I Q+F+FITHAHLDHIGGLPMYVA+RGLY+LKPP +FVPPCIKEDVEKLF+IHR M Q  
Sbjct: 121  IHQNFVFITHAHLDHIGGLPMYVASRGLYNLKPPTVFVPPCIKEDVEKLFDIHRSMGQVE 180

Query: 694  XXXXXXXXXXGDTYELRNDLVVRSFKTHHVIPSQGYVIYSIRKKLKKQYTHLKDKGKQIE 873
                      G+TYELRN++VVR F+T HVIPSQGYVIYS+RKKLKKQYTHL  KGKQIE
Sbjct: 181  LNLELVALDVGETYELRNNVVVRPFRTQHVIPSQGYVIYSVRKKLKKQYTHL--KGKQIE 238

Query: 874  KLKKSGVEITDVILSPEMAFTGDTTSDFLLDPRNADALRAKILVTEATFLDGGISIEHAR 1053
            KLKKSGVEITD++LSPE+AFTGDTT++++LDP NADALRAK+L+TEATFLD G SIEHAR
Sbjct: 239  KLKKSGVEITDIMLSPEVAFTGDTTAEYMLDPHNADALRAKVLITEATFLDEGFSIEHAR 298

Query: 1054 QHGHTHLFELMEHAEWIRNKAILLTHFSSRYKKEDIDEAVSKLQQRVSAKVVALTEGFK* 1233
            QHGHTHL E++E+AEWIRNK++LLTHFSSRY  EDI +AV KLQ +VSAKVV LTEGFK 
Sbjct: 299  QHGHTHLLEIIENAEWIRNKSVLLTHFSSRYTVEDIRQAVLKLQSKVSAKVVPLTEGFKS 358

Query: 1234 T 1236
            T
Sbjct: 359  T 359


>ref|XP_004156084.1| PREDICTED: ribonuclease Z, chloroplastic-like [Cucumis sativus]
          Length = 347

 Score =  469 bits (1208), Expect = e-130
 Identities = 246/351 (70%), Positives = 280/351 (79%), Gaps = 1/351 (0%)
 Frame = +1

Query: 181  ITISTSPLFFPPQIPTPKFPLSTPT-HILSTPSHKDHHPLFAHRGSSSGFLSAVDRVIEE 357
            I+I  SPL  P   P  +  L TP  H ++  SH +  P+ + R   SG LS +     E
Sbjct: 3    ISIPISPLRPPQVFPFHQPLLHTPKPHGVALQSHLN--PVNSFR--DSGLLSTIG---VE 55

Query: 358  EEYRKARAQMNRKGVDLEGYLIEGISVGGHETCVIVPRLNAAFDIGRCPSRAIQQDFLFI 537
            EEYR+AR+Q+NRKGVDLEGY IEGISVGG ETCVI+P    AFDIGRCPSRAIQQ+F+FI
Sbjct: 56   EEYRRARSQVNRKGVDLEGYSIEGISVGGQETCVIIPEFKCAFDIGRCPSRAIQQNFVFI 115

Query: 538  THAHLDHIGGLPMYVATRGLYSLKPPIIFVPPCIKEDVEKLFEIHRKMSQXXXXXXXXXX 717
            THAHLDHIGGLPMYVA+RGLYSL PP +F+P  IKEDVEKL EIHR M Q          
Sbjct: 116  THAHLDHIGGLPMYVASRGLYSLSPPTVFLPASIKEDVEKLLEIHRNMGQVELDVDLVAL 175

Query: 718  XXGDTYELRNDLVVRSFKTHHVIPSQGYVIYSIRKKLKKQYTHLKDKGKQIEKLKKSGVE 897
              G+TYE+RN+LV R+F+THHVIPSQGYVIYS+RKKLKKQY HL  KGKQIEKLKKSGVE
Sbjct: 176  DVGETYEMRNNLVCRAFETHHVIPSQGYVIYSVRKKLKKQYMHL--KGKQIEKLKKSGVE 233

Query: 898  ITDVILSPEMAFTGDTTSDFLLDPRNADALRAKILVTEATFLDGGISIEHARQHGHTHLF 1077
            ITD ILSPE+AFTGDTT DF+LDPRNADALRAKIL+TEATFLD  +SIEHARQHGHTH+F
Sbjct: 234  ITDTILSPEVAFTGDTTPDFMLDPRNADALRAKILITEATFLDEAVSIEHARQHGHTHIF 293

Query: 1078 ELMEHAEWIRNKAILLTHFSSRYKKEDIDEAVSKLQQRVSAKVVALTEGFK 1230
            E++E+A+WIRNKAILLTHFSSRY  EDI +AVSKLQ  V+AKVV LTEGFK
Sbjct: 294  EIIENAQWIRNKAILLTHFSSRYHIEDIRKAVSKLQSNVTAKVVPLTEGFK 344


>ref|XP_004140131.1| PREDICTED: ribonuclease Z, chloroplastic-like [Cucumis sativus]
          Length = 347

 Score =  469 bits (1208), Expect = e-130
 Identities = 245/360 (68%), Positives = 281/360 (78%), Gaps = 4/360 (1%)
 Frame = +1

Query: 163  MQTSLCITISTSPLFFP---PQIPTPKFP-LSTPTHILSTPSHKDHHPLFAHRGSSSGFL 330
            MQ S+ I+    P  FP   P + TPK P ++  +H+    S +D           SG L
Sbjct: 1    MQISIPISPLRPPQVFPFHQPLLHTPKPPGVALQSHLNPVNSFRD-----------SGLL 49

Query: 331  SAVDRVIEEEEYRKARAQMNRKGVDLEGYLIEGISVGGHETCVIVPRLNAAFDIGRCPSR 510
            S +     EEEYR+AR+Q+NRKGVDLEGY IEGISVGG ETCVI+P    AFDIGRCPSR
Sbjct: 50   STIG---VEEEYRRARSQVNRKGVDLEGYSIEGISVGGQETCVIIPEFKCAFDIGRCPSR 106

Query: 511  AIQQDFLFITHAHLDHIGGLPMYVATRGLYSLKPPIIFVPPCIKEDVEKLFEIHRKMSQX 690
            AIQQ+F+FITHAHLDHIGGLPMYVA+RGLYSL PP +F+P  IKEDVEKL EIHR M Q 
Sbjct: 107  AIQQNFVFITHAHLDHIGGLPMYVASRGLYSLSPPTVFLPASIKEDVEKLLEIHRNMGQV 166

Query: 691  XXXXXXXXXXXGDTYELRNDLVVRSFKTHHVIPSQGYVIYSIRKKLKKQYTHLKDKGKQI 870
                       G+TYE+RN+LV R+F+THHVIPSQGYVIYS+RKKLKKQY HL  KGKQI
Sbjct: 167  ELDVDLVALDVGETYEMRNNLVCRAFETHHVIPSQGYVIYSVRKKLKKQYMHL--KGKQI 224

Query: 871  EKLKKSGVEITDVILSPEMAFTGDTTSDFLLDPRNADALRAKILVTEATFLDGGISIEHA 1050
            EKLKKSGVEITD ILSPE+AFTGDTT DF+LDPRNADALRAKIL+TEATFLD  +SIEHA
Sbjct: 225  EKLKKSGVEITDTILSPEVAFTGDTTPDFMLDPRNADALRAKILITEATFLDEAVSIEHA 284

Query: 1051 RQHGHTHLFELMEHAEWIRNKAILLTHFSSRYKKEDIDEAVSKLQQRVSAKVVALTEGFK 1230
            RQHGHTH+FE++E+A+WIRNKAILLTHFSSRY  EDI +AVSKLQ  ++AKVV LTEGFK
Sbjct: 285  RQHGHTHIFEIIENAQWIRNKAILLTHFSSRYHIEDIRKAVSKLQSNLTAKVVPLTEGFK 344


>ref|XP_003519435.1| PREDICTED: ribonuclease Z, chloroplastic-like [Glycine max]
          Length = 354

 Score =  467 bits (1202), Expect = e-129
 Identities = 242/359 (67%), Positives = 283/359 (78%), Gaps = 3/359 (0%)
 Frame = +1

Query: 163  MQTSLCITISTSPLFFPPQIPT--PKFPLSTPTHILSTPSHKDHHPLFAHRGSSSGFLSA 336
            MQ SL      +P  FP Q P   PK PL    H +ST SH ++      +GSS G+LS 
Sbjct: 1    MQISLSNLAFKTPQLFPIQHPIFPPKAPLYH--HQVSTQSHVNN----VLKGSS-GYLSE 53

Query: 337  VDRVIE-EEEYRKARAQMNRKGVDLEGYLIEGISVGGHETCVIVPRLNAAFDIGRCPSRA 513
            + + I+ EE+YR AR+Q+NRK +DLEGY IEG+SVGG ETC+I+P     FDIGRCPSRA
Sbjct: 54   ISKAIDHEEQYRLARSQVNRKVLDLEGYSIEGLSVGGQETCIIIPEFKCTFDIGRCPSRA 113

Query: 514  IQQDFLFITHAHLDHIGGLPMYVATRGLYSLKPPIIFVPPCIKEDVEKLFEIHRKMSQXX 693
            IQQ+FLFITHAHLDHIGGLPMYVA+RGL++LKPP +FVPPCIKEDVEKL +IHR M Q  
Sbjct: 114  IQQNFLFITHAHLDHIGGLPMYVASRGLFNLKPPTVFVPPCIKEDVEKLLDIHRTMGQVE 173

Query: 694  XXXXXXXXXXGDTYELRNDLVVRSFKTHHVIPSQGYVIYSIRKKLKKQYTHLKDKGKQIE 873
                      G+TYE+RN+LVVR F+T HVIPSQGYV+YSIRKKL+KQY HL   GKQIE
Sbjct: 174  LNAEVVALDVGETYEIRNNLVVRPFRTQHVIPSQGYVVYSIRKKLRKQYAHL--NGKQIE 231

Query: 874  KLKKSGVEITDVILSPEMAFTGDTTSDFLLDPRNADALRAKILVTEATFLDGGISIEHAR 1053
            KLKKSG+EITD+ILSPE+AFTGDTTSDF+LDP NADALRAKIL+TEATFLD   SI+HAR
Sbjct: 232  KLKKSGIEITDMILSPEVAFTGDTTSDFMLDPCNADALRAKILITEATFLDDSFSIDHAR 291

Query: 1054 QHGHTHLFELMEHAEWIRNKAILLTHFSSRYKKEDIDEAVSKLQQRVSAKVVALTEGFK 1230
            QHGHTHLFE++ +A+WIRNKA+LLTHFS RY  EDI +A SKLQ R+SAKVV LTEGFK
Sbjct: 292  QHGHTHLFEIIANAQWIRNKAVLLTHFSPRYTIEDIRQAASKLQSRLSAKVVPLTEGFK 350