BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00014957
         (1413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284899.1| PREDICTED: E3 ubiquitin-protein ligase ATL6 ...   278   2e-72
ref|XP_002512343.1| ring finger protein, putative [Ricinus commu...   250   6e-64
ref|XP_003536091.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-...   248   2e-63
emb|CBI36742.3| unnamed protein product [Vitis vinifera]              248   4e-63
ref|XP_003591073.1| RING finger family protein [Medicago truncat...   248   4e-63

>ref|XP_002284899.1| PREDICTED: E3 ubiquitin-protein ligase ATL6 isoform 1 [Vitis
            vinifera] gi|147843962|emb|CAN83712.1| hypothetical
            protein VITISV_011102 [Vitis vinifera]
          Length = 420

 Score =  278 bits (712), Expect = 2e-72
 Identities = 173/353 (49%), Positives = 207/353 (58%), Gaps = 25/353 (7%)
 Frame = -1

Query: 1167 PHANAQPTNDNSGGRYGYQTYSNPNLKPSMXXXXXXXXXXXXXXXFISFYIRRCSHDMHM 988
            P A AQ  +D S   Y  Q +S+     SM               F S YIR CS   + 
Sbjct: 42   PFAGAQ--SDTSNDPYQQQRFSS-----SMAIIIVILVAALFLMGFFSVYIRHCSDSRN- 93

Query: 987  SGGSVR------ITRTRPAPRGLEASVIETFPTFLYSEVKGLKIGKGVLECAVCLNEFED 826
             GGS+R      + R+R   RGL+ +V+ETFPTF YS VKGLKIGKGVLECAVCLNEFED
Sbjct: 94   -GGSIRAAAGAALGRSRRGTRGLDQAVLETFPTFEYSVVKGLKIGKGVLECAVCLNEFED 152

Query: 825  EETLRLLPKCDHVFHPECIDAWLSSHTTCPVCRAELV-PHQPSEAPQEPESGVQPAENGE 649
             ETLRL+PKCDHVFHPECIDAWL+SH TCPVCRA L  P  P++     E+     E+  
Sbjct: 153  NETLRLIPKCDHVFHPECIDAWLASHVTCPVCRANLTEPAVPTDYSAAVEAAESAGESDH 212

Query: 648  NNDPGTSESQS--HVSITVDDD-----PKPDVINPTQIAFPIQNRPARSKSMLKGIAGRF 490
            + +   SE  +   VSI V DD       PDVINP Q     QNRP RSKS       +F
Sbjct: 213  DGEDRRSEINAVREVSIRVADDETDVQQAPDVINPNQSLH--QNRPPRSKSTR---PRKF 267

Query: 489  PRSHSTGHSQVQPGDNHERFTLKLPDEVRKQILSRKLNRTTSCITVPTQGSVRRNGSVRE 310
            PRSHSTGHS +QPG+N ERFTLKLP++VRKQI+ R LNRTTS + +P  GS R+      
Sbjct: 268  PRSHSTGHSLIQPGENCERFTLKLPEDVRKQIMKRALNRTTSLLVLPRDGSSRQGYRTAG 327

Query: 309  NGQS--------GRLDRAAKSDRWGFLTATQFFWRNNSARLSK---KGEGSTS 184
             G S         RL+R+ KSDRW F     FF R +S +  K    GE ++S
Sbjct: 328  EGSSRGKNFRRFDRLERSGKSDRWTFSITPPFFSRASSLKSPKVAADGEATSS 380


>ref|XP_002512343.1| ring finger protein, putative [Ricinus communis]
            gi|223548304|gb|EEF49795.1| ring finger protein, putative
            [Ricinus communis]
          Length = 380

 Score =  250 bits (639), Expect = 6e-64
 Identities = 163/377 (43%), Positives = 210/377 (55%), Gaps = 35/377 (9%)
 Frame = -1

Query: 1161 ANAQPTNDNSGGRYGYQTYSNPNLKPSMXXXXXXXXXXXXXXXFISFYIRRCSHDMHMSG 982
            A AQP+   +   YGY       + PSM               F S YIR C++  +  G
Sbjct: 22   ALAQPSPAEARDPYGYA-----RVTPSMAIIIVVLIAALFFMGFFSVYIRHCANSSN--G 74

Query: 981  GSVR------ITRTRPAPRGLEASVIETFPTFLYSEVKGLKIGKGVLECAVCLNEFEDEE 820
             SV+       +R   A RGL+A+VIETFPT +YSEVKGLKIGKG LECAVCL EFED+E
Sbjct: 75   VSVQGLANGGRSRRAAAARGLDAAVIETFPTLVYSEVKGLKIGKGALECAVCLCEFEDDE 134

Query: 819  TLRLLPKCDHVFHPECIDAWLSSHTTCPVCRAELVPHQPSEAPQEPESGVQPAENGENND 640
            TLRLLPKCDHVFHP+CIDAWL+SHTTCPVCR+ L P      P +P     P +  E+  
Sbjct: 135  TLRLLPKCDHVFHPDCIDAWLASHTTCPVCRSNLTPQ-----PVDP-----PTQTTESLP 184

Query: 639  PGTSESQSHVSITVDDDPKPDVINPTQIAFPIQ----------NRPARSKSMLKGIAGRF 490
              +S+ ++     V+ +P+P+V    Q+A   +          NR  R++    G   +F
Sbjct: 185  DSSSDLEAQNEAVVELEPQPEVCENAQVAVAPEPEVMSVNQTLNR-NRTRGSRSGRPSKF 243

Query: 489  PRSHSTGHSQVQPGDNHERFTLKLPDEVRKQILSRKLNRTTSCITVPTQGSVRR------ 328
            PRSHSTGHS +QPG+N +RFTL+LP EVRKQI++R+LNRT S +    + S +R      
Sbjct: 244  PRSHSTGHSLIQPGENTDRFTLRLPVEVRKQIMNRELNRTMSMVVFSRERSSKRGYKTGG 303

Query: 327  -NGSVR-ENGQSGRLDRAAKSDRWGFLTATQFFWRNNS--ARLSKKGEGSTSAKSDGMGE 160
              GS R +  +  RLD+ AKSDR  +     F  R +S   R S        A SDG G 
Sbjct: 304  GEGSSRGKYKRLERLDQGAKSDRLVYNRTPSFLARASSFLTRASSSVRSPRVAASDGEGT 363

Query: 159  SS---------STRPPV 136
            S+         S RPPV
Sbjct: 364  STGPSGPHAVQSNRPPV 380


>ref|XP_003536091.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Glycine max]
          Length = 359

 Score =  248 bits (634), Expect = 2e-63
 Identities = 165/353 (46%), Positives = 195/353 (55%), Gaps = 22/353 (6%)
 Frame = -1

Query: 1167 PHANAQP-TNDNSGGRYGYQTYSNPNLKPSMXXXXXXXXXXXXXXXFISFYIRRCSHDMH 991
            P A AQP TN N       Q+Y N    PSM               F S YIR CS    
Sbjct: 18   PFAAAQPATNQN-------QSYYN-KFSPSMAIIIVILIAALFLMGFFSIYIRHCSDSPS 69

Query: 990  MSGGSVRIT--RTRPAPRGLEASVIETFPTFLYSEVKGLKIGKGVLECAVCLNEFEDEET 817
             S  ++     R+R   RGLE +VI+TFPT  YS VK  K+GKG LECAVCLNEFED ET
Sbjct: 70   ASIRNLAAATGRSRRGTRGLEQAVIDTFPTLEYSAVKIHKLGKGTLECAVCLNEFEDTET 129

Query: 816  LRLLPKCDHVFHPECIDAWLSSHTTCPVCRAELVPHQPSE---------APQEPESGVQP 664
            LRL+PKCDHVFHPECID WL+SHTTCPVCRA LVP QP E         AP++ E     
Sbjct: 130  LRLIPKCDHVFHPECIDEWLASHTTCPVCRANLVP-QPGESVHGIPILNAPEDIE----- 183

Query: 663  AENGENNDPGTSESQSHVSITVDDDPKPDVINPTQIAFPIQN-RPARSKSMLKGIAGRFP 487
            A++   ND    E Q         DPKP V    Q+    Q     R++    G   RFP
Sbjct: 184  AQHEAQNDLVEPEQQ-------QQDPKPPVPTEPQVLSLNQTLNRNRTRGSRSGRPRRFP 236

Query: 486  RSHSTGHSQVQPGDNHERFTLKLPDEVRKQILSR-KLNRTTSCITVPTQGSVRRNGSVRE 310
            RSHSTGHS V PG++ ERFTL+LP+EVRKQIL   +L+R  S + +P +GS RR     E
Sbjct: 237  RSHSTGHSLVLPGEDTERFTLRLPEEVRKQILQNPQLHRARSLVILPREGSSRRGYRTGE 296

Query: 309  NGQSG----RLDRAAKSDRWGFLTATQFFWRNNSAR----LSKKGEGSTSAKS 175
                G    RLDR  KSDRW F  A  F  R +S R     +  GEG+++A S
Sbjct: 297  GSSRGRSSRRLDRGFKSDRWVFTMAPPFLVRASSIRSPRVANNGGEGTSAAAS 349


>emb|CBI36742.3| unnamed protein product [Vitis vinifera]
          Length = 443

 Score =  248 bits (632), Expect = 4e-63
 Identities = 153/345 (44%), Positives = 190/345 (55%), Gaps = 17/345 (4%)
 Frame = -1

Query: 1167 PHANAQPTNDNSGGRYGYQTYSNPNLKPSMXXXXXXXXXXXXXXXFISFYIRRCSHDMHM 988
            P A AQ  +D S   Y  Q +S+     SM               F S YIR CS   + 
Sbjct: 70   PFAGAQ--SDTSNDPYQQQRFSS-----SMAIIIVILVAALFLMGFFSVYIRHCSDSRN- 121

Query: 987  SGGSVR------ITRTRPAPRGLEASVIETFPTFLYSEVKGLKIGKGVLECAVCLNEFED 826
             GGS+R      + R+R   RGL+ +V+ETFPTF YS VKGLKIGKGVLECAVCLNEFED
Sbjct: 122  -GGSIRAAAGAALGRSRRGTRGLDQAVLETFPTFEYSVVKGLKIGKGVLECAVCLNEFED 180

Query: 825  EETLRLLPKCDHVFHPECIDAWLSSHTTCPVCRAELVPHQPSEAPQEPESGVQPAENGEN 646
             ETLRL+PKCDHVFHPECIDAWL+SH TCPVCRA L   +P+  P +  + V+ AE+   
Sbjct: 181  NETLRLIPKCDHVFHPECIDAWLASHVTCPVCRANLT--EPA-VPTDYSAAVEAAESAGE 237

Query: 645  NDPGTSESQSHVSITVDDDPKPDVINPTQIAFPIQNRPARSKSMLKGIAGRFPRSHSTGH 466
            +D    + +S ++                                      FPRSHSTGH
Sbjct: 238  SDHDGEDRRSEIN-------------------------------------AFPRSHSTGH 260

Query: 465  SQVQPGDNHERFTLKLPDEVRKQILSRKLNRTTSCITVPTQGSVRRNGSVRENGQS---- 298
            S +QPG+N ERFTLKLP++VRKQI+ R LNRTTS + +P  GS R+       G S    
Sbjct: 261  SLIQPGENCERFTLKLPEDVRKQIMKRALNRTTSLLVLPRDGSSRQGYRTAGEGSSRGKN 320

Query: 297  ----GRLDRAAKSDRWGFLTATQFFWRNNSARLSK---KGEGSTS 184
                 RL+R+ KSDRW F     FF R +S +  K    GE ++S
Sbjct: 321  FRRFDRLERSGKSDRWTFSITPPFFSRASSLKSPKVAADGEATSS 365


>ref|XP_003591073.1| RING finger family protein [Medicago truncatula]
            gi|355480121|gb|AES61324.1| RING finger family protein
            [Medicago truncatula] gi|388512099|gb|AFK44111.1| unknown
            [Medicago truncatula]
          Length = 373

 Score =  248 bits (632), Expect = 4e-63
 Identities = 169/362 (46%), Positives = 195/362 (53%), Gaps = 18/362 (4%)
 Frame = -1

Query: 1167 PHANAQPTNDNSGGRYGYQTYSNPNLKPSMXXXXXXXXXXXXXXXFISFYIRRCSHD--- 997
            P A AQ TNDN+     Y   S     PSM               F S YIRRC      
Sbjct: 26   PFAGAQ-TNDNTNDNSYYNRVS-----PSMAIIIVILVAALFLMGFFSIYIRRCGDSPSN 79

Query: 996  --MHMSGGSVRITRTRPAPRGLEASVIETFPTFLYSEVKGLKIGKGVLECAVCLNEFEDE 823
               +M+GG     R+R A RGL+ASVI TFP F YS VK  KIGKG LECAVCLNEFE+ 
Sbjct: 80   SIRNMAGGLAG--RSRRAARGLDASVIATFPIFEYSTVKIHKIGKGALECAVCLNEFEES 137

Query: 822  ETLRLLPKCDHVFHPECIDAWLSSHTTCPVCRAELVPHQPSEAPQEPESGVQPAENGENN 643
            ETLRL+PKCDHVFHPECID WL SHTTCPVCRA LVP         P    +P +    N
Sbjct: 138  ETLRLIPKCDHVFHPECIDEWLGSHTTCPVCRANLVPQPGESVHGIPSINTEPQDIEAQN 197

Query: 642  DPGTS--ESQSHVSITVDDDPKPDVINPTQIAFPIQNRPARSKSMLKGIAGRFPRSHSTG 469
            D   S  E Q+       D  +P+V+  +Q      NR  R++    G    F RSHSTG
Sbjct: 198  DAVESVHEHQNADGSVKVDPTEPEVLTVSQTL----NR-NRTRGSQSGRPRWFQRSHSTG 252

Query: 468  HSQVQPGDNHERFTLKLPDEVRKQILSR-KLNRTTSCITVPTQGSVRR-----NGSVREN 307
            HS VQPG+N ERFTL+LP EVRKQIL   +L+R  S + +P + S RR      G     
Sbjct: 253  HSLVQPGENTERFTLRLPVEVRKQILQNPELHRARSLVVLPRETSSRRGYRTGGGEGSSR 312

Query: 306  GQS-GRLDRAAKSDRWGFLTATQFFWRNNSAR----LSKKGEGSTSAKSDGMGESSSTRP 142
            G+S  RLDR   SDRW F  A  F  R +S R     S  GEG TSA +       S RP
Sbjct: 313  GKSVRRLDRGLLSDRWVFTMAPPFLVRASSMRSPRVASSAGEG-TSASAATAAVVESPRP 371

Query: 141  PV 136
            PV
Sbjct: 372  PV 373