BLASTX nr result

ID: Cimicifuga21_contig00014953 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00014953
         (1520 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15766.3| unnamed protein product [Vitis vinifera]              345   1e-92
ref|XP_002284683.1| PREDICTED: pre-rRNA-processing protein ESF2 ...   344   4e-92
emb|CAN83161.1| hypothetical protein VITISV_022556 [Vitis vinifera]   338   2e-90
ref|XP_004172361.1| PREDICTED: pre-rRNA-processing protein esf2-...   324   4e-86
ref|XP_004142778.1| PREDICTED: pre-rRNA-processing protein ESF2-...   324   4e-86

>emb|CBI15766.3| unnamed protein product [Vitis vinifera]
          Length = 344

 Score =  345 bits (886), Expect = 1e-92
 Identities = 182/263 (69%), Positives = 202/263 (76%), Gaps = 1/263 (0%)
 Frame = +3

Query: 510  TTNMTAEEQDQNSTPHIGLEGENVVRSTQGNEKNADXXXXXXXXXXXXXXXXADKRGVCY 689
            T  M  EEQ+   T H   EGE+     +GN++                   ADKRGVCY
Sbjct: 85   TLRMAEEEQEIKRTSH-SEEGES-----EGNDEKGRIRKNKLKKRLLKEASKADKRGVCY 138

Query: 690  LSRIPPRMDPLKLRQILSQYGEIQRIYLTPEDPAAQVHRKRAGGFRGQEFSEGWVEFTKK 869
            LSRIPP MD +KLR ILSQYGEIQRIYL PEDPA QVHRKRAGGFRGQ FSEGWVEFTKK
Sbjct: 139  LSRIPPHMDHVKLRHILSQYGEIQRIYLAPEDPATQVHRKRAGGFRGQVFSEGWVEFTKK 198

Query: 870  SVARRVANAINGEQIGGRKRSSFYYDLWNIKYLSKFKWDNLTEEIAYKNATREQKLALEI 1049
            +VA+RVA  +NGEQIGGRKRSSFYYDLWNIKYLSKFKWD+LTEEIAYKNA REQKLALE+
Sbjct: 199  TVAKRVAKMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEEIAYKNAIREQKLALEL 258

Query: 1050 SAAKRERDFYLSKVDKSRALTSIQERMKKKQKVQQDSDMKSGTPDNQLEPKVIRHFPQTR 1229
            SAAKRERDFYLSKVDKSRAL+SI+ER+KKKQKVQQD+   +  P N   PKVIR FPQ  
Sbjct: 259  SAAKRERDFYLSKVDKSRALSSIEERLKKKQKVQQDAGTNTEAPANDQGPKVIRQFPQKP 318

Query: 1230 PVADTSSVSK-TLSKDVLAKVFG 1295
            P+AD ++ SK  LSKD+LA VFG
Sbjct: 319  PLADKAAESKPRLSKDILAGVFG 341


>ref|XP_002284683.1| PREDICTED: pre-rRNA-processing protein ESF2 [Vitis vinifera]
          Length = 257

 Score =  344 bits (882), Expect = 4e-92
 Identities = 181/260 (69%), Positives = 201/260 (77%), Gaps = 1/260 (0%)
 Frame = +3

Query: 519  MTAEEQDQNSTPHIGLEGENVVRSTQGNEKNADXXXXXXXXXXXXXXXXADKRGVCYLSR 698
            M  EEQ+   T H   EGE+     +GN++                   ADKRGVCYLSR
Sbjct: 1    MAEEEQEIKRTSH-SEEGES-----EGNDEKGRIRKNKLKKRLLKEASKADKRGVCYLSR 54

Query: 699  IPPRMDPLKLRQILSQYGEIQRIYLTPEDPAAQVHRKRAGGFRGQEFSEGWVEFTKKSVA 878
            IPP MD +KLR ILSQYGEIQRIYL PEDPA QVHRKRAGGFRGQ FSEGWVEFTKK+VA
Sbjct: 55   IPPHMDHVKLRHILSQYGEIQRIYLAPEDPATQVHRKRAGGFRGQVFSEGWVEFTKKTVA 114

Query: 879  RRVANAINGEQIGGRKRSSFYYDLWNIKYLSKFKWDNLTEEIAYKNATREQKLALEISAA 1058
            +RVA  +NGEQIGGRKRSSFYYDLWNIKYLSKFKWD+LTEEIAYKNA REQKLALE+SAA
Sbjct: 115  KRVAKMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEEIAYKNAIREQKLALELSAA 174

Query: 1059 KRERDFYLSKVDKSRALTSIQERMKKKQKVQQDSDMKSGTPDNQLEPKVIRHFPQTRPVA 1238
            KRERDFYLSKVDKSRAL+SI+ER+KKKQKVQQD+   +  P N   PKVIR FPQ  P+A
Sbjct: 175  KRERDFYLSKVDKSRALSSIEERLKKKQKVQQDAGTNTEAPANDQGPKVIRQFPQKPPLA 234

Query: 1239 DTSSVSK-TLSKDVLAKVFG 1295
            D ++ SK  LSKD+LA VFG
Sbjct: 235  DKAAESKPRLSKDILAGVFG 254


>emb|CAN83161.1| hypothetical protein VITISV_022556 [Vitis vinifera]
          Length = 486

 Score =  338 bits (868), Expect = 2e-90
 Identities = 178/256 (69%), Positives = 198/256 (77%), Gaps = 1/256 (0%)
 Frame = +3

Query: 519  MTAEEQDQNSTPHIGLEGENVVRSTQGNEKNADXXXXXXXXXXXXXXXXADKRGVCYLSR 698
            M  EEQ+   T H   EGE+     +GN++                   ADKRGVCYLSR
Sbjct: 1    MAEEEQEIKRTSH-SEEGES-----EGNDEKGRIRKNKLKKRLLKEASKADKRGVCYLSR 54

Query: 699  IPPRMDPLKLRQILSQYGEIQRIYLTPEDPAAQVHRKRAGGFRGQEFSEGWVEFTKKSVA 878
            IPP MD +KLR ILSQYGEIQRIYL PEDPA QVHRKRAGGFRGQ FSEGWVEFTKK+VA
Sbjct: 55   IPPHMDHVKLRHILSQYGEIQRIYLAPEDPATQVHRKRAGGFRGQVFSEGWVEFTKKTVA 114

Query: 879  RRVANAINGEQIGGRKRSSFYYDLWNIKYLSKFKWDNLTEEIAYKNATREQKLALEISAA 1058
            +RVA  +NGEQIGGRKRSSFYYDLWNIKYLSKFKWD+LTEEIAYKNA REQKLALE+SAA
Sbjct: 115  KRVAKMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEEIAYKNAIREQKLALELSAA 174

Query: 1059 KRERDFYLSKVDKSRALTSIQERMKKKQKVQQDSDMKSGTPDNQLEPKVIRHFPQTRPVA 1238
            KRERDFYLSKVDKSRAL+SI+ER+KKKQKVQQD+   +  P N   PKVIR FPQ  P+A
Sbjct: 175  KRERDFYLSKVDKSRALSSIEERLKKKQKVQQDAGTNTEAPANDQGPKVIRQFPQKPPLA 234

Query: 1239 DTSSVSK-TLSKDVLA 1283
            D ++ SK  LSKD+LA
Sbjct: 235  DKAAESKPRLSKDILA 250


>ref|XP_004172361.1| PREDICTED: pre-rRNA-processing protein esf2-like, partial [Cucumis
            sativus]
          Length = 326

 Score =  324 bits (830), Expect = 4e-86
 Identities = 163/211 (77%), Positives = 184/211 (87%), Gaps = 1/211 (0%)
 Frame = +3

Query: 666  ADKRGVCYLSRIPPRMDPLKLRQILSQYGEIQRIYLTPEDPAAQVHRKRAGGFRGQEFSE 845
            AD RG+CYLSR+PP MDPLKLRQILSQ+GEIQRIYL PED A+QV RKRAGGFRGQ FSE
Sbjct: 114  ADMRGICYLSRVPPHMDPLKLRQILSQHGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSE 173

Query: 846  GWVEFTKKSVARRVANAINGEQIGGRKRSSFYYDLWNIKYLSKFKWDNLTEEIAYKNATR 1025
            GWVEFT K VA+RVAN +NGE IGGRKRSSFYYDLWNIKYLSKFKWD+LTEE AYK+A R
Sbjct: 174  GWVEFTDKRVAKRVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIR 233

Query: 1026 EQKLALEISAAKRERDFYLSKVDKSRALTSIQERMKKKQKVQQDSDMKSGTPDNQLEPKV 1205
            EQKLALEISAAKRERDFYL+KVDKSRAL SI+ER+KKKQK+++DS+M S   D+Q  PK+
Sbjct: 234  EQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKL 293

Query: 1206 IRHFPQTRPVADTSSVSK-TLSKDVLAKVFG 1295
            IR FPQT+PVAD +  +K  LS +VLA VFG
Sbjct: 294  IRSFPQTQPVADFAVQNKPRLSTNVLAGVFG 324


>ref|XP_004142778.1| PREDICTED: pre-rRNA-processing protein ESF2-like [Cucumis sativus]
          Length = 380

 Score =  324 bits (830), Expect = 4e-86
 Identities = 163/211 (77%), Positives = 184/211 (87%), Gaps = 1/211 (0%)
 Frame = +3

Query: 666  ADKRGVCYLSRIPPRMDPLKLRQILSQYGEIQRIYLTPEDPAAQVHRKRAGGFRGQEFSE 845
            AD RG+CYLSR+PP MDPLKLRQILSQ+GEIQRIYL PED A+QV RKRAGGFRGQ FSE
Sbjct: 168  ADMRGICYLSRVPPHMDPLKLRQILSQHGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSE 227

Query: 846  GWVEFTKKSVARRVANAINGEQIGGRKRSSFYYDLWNIKYLSKFKWDNLTEEIAYKNATR 1025
            GWVEFT K VA+RVAN +NGE IGGRKRSSFYYDLWNIKYLSKFKWD+LTEE AYK+A R
Sbjct: 228  GWVEFTDKRVAKRVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIR 287

Query: 1026 EQKLALEISAAKRERDFYLSKVDKSRALTSIQERMKKKQKVQQDSDMKSGTPDNQLEPKV 1205
            EQKLALEISAAKRERDFYL+KVDKSRAL SI+ER+KKKQK+++DS+M S   D+Q  PK+
Sbjct: 288  EQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKL 347

Query: 1206 IRHFPQTRPVADTSSVSK-TLSKDVLAKVFG 1295
            IR FPQT+PVAD +  +K  LS +VLA VFG
Sbjct: 348  IRSFPQTQPVADFAVQNKPRLSTNVLAGVFG 378


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