BLASTX nr result

ID: Cimicifuga21_contig00014942 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00014942
         (1075 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316436.1| predicted protein [Populus trichocarpa] gi|2...   119   2e-24
ref|XP_002887759.1| hypothetical protein ARALYDRAFT_477053 [Arab...   115   2e-23
gb|AAC83022.1| EST gb|R65024 comes from this gene [Arabidopsis t...   115   2e-23
ref|NP_565193.1| uncharacterized protein [Arabidopsis thaliana] ...   113   9e-23
gb|AAM64669.1| unknown [Arabidopsis thaliana]                         113   9e-23

>ref|XP_002316436.1| predicted protein [Populus trichocarpa] gi|222865476|gb|EEF02607.1|
           predicted protein [Populus trichocarpa]
          Length = 167

 Score =  119 bits (297), Expect = 2e-24
 Identities = 60/108 (55%), Positives = 77/108 (71%), Gaps = 6/108 (5%)
 Frame = -3

Query: 884 IRRLEDAIHGIIVKRSAPDWLPFVPGSSYWVPPRKR---PYGFVELVEKLANPLTAEENL 714
           +R+LEDAIHGIIV+R+APDWLPF+PGSSYWVPP +      G   LVEKLANPL+ EE+L
Sbjct: 59  LRKLEDAIHGIIVRRAAPDWLPFLPGSSYWVPPPRSASGSLGIAHLVEKLANPLSDEESL 118

Query: 713 SLASVRGYPASSYFV---DDYFVGARASPYPVDIETNSEKLSQSEDEE 579
           S ++VRG+P+S YFV       V  + +   V+ +T +   SQSEDEE
Sbjct: 119 STSTVRGWPSSDYFVKGASSQLVEVKLNSKKVEADTTTSNTSQSEDEE 166


>ref|XP_002887759.1| hypothetical protein ARALYDRAFT_477053 [Arabidopsis lyrata subsp.
           lyrata] gi|297333600|gb|EFH64018.1| hypothetical protein
           ARALYDRAFT_477053 [Arabidopsis lyrata subsp. lyrata]
          Length = 152

 Score =  115 bits (288), Expect = 2e-23
 Identities = 55/103 (53%), Positives = 74/103 (71%), Gaps = 1/103 (0%)
 Frame = -3

Query: 884 IRRLEDAIHGIIVKRSAPDWLPFVPGSSYWV-PPRKRPYGFVELVEKLANPLTAEENLSL 708
           + +LEDA+H I+V+RSAPDWLPFVPG+SYWV PPR + +G  +LVEKLANP++ EE++S+
Sbjct: 56  LHKLEDAVHRIMVRRSAPDWLPFVPGASYWVPPPRSQTHGIAKLVEKLANPISDEESISI 115

Query: 707 ASVRGYPASSYFVDDYFVGARASPYPVDIETNSEKLSQSEDEE 579
           +SVRG+P S YF+          P  V+ E  S   S S+DEE
Sbjct: 116 SSVRGWPCSDYFIKG------VKPQSVETEMTSNTASDSDDEE 152


>gb|AAC83022.1| EST gb|R65024 comes from this gene [Arabidopsis thaliana]
          Length = 156

 Score =  115 bits (287), Expect = 2e-23
 Identities = 55/103 (53%), Positives = 74/103 (71%), Gaps = 1/103 (0%)
 Frame = -3

Query: 884 IRRLEDAIHGIIVKRSAPDWLPFVPGSSYWV-PPRKRPYGFVELVEKLANPLTAEENLSL 708
           + +LEDA+H I+V+RSAPDWLPFVPG+S+WV PPR + +G  +LVEKLANP++ EE++S+
Sbjct: 59  VNKLEDAVHRIMVRRSAPDWLPFVPGASFWVPPPRSQSHGIAKLVEKLANPISDEESISI 118

Query: 707 ASVRGYPASSYFVDDYFVGARASPYPVDIETNSEKLSQSEDEE 579
           +SVRG+P S     DYF+     P  V+ E  S     SEDEE
Sbjct: 119 SSVRGWPCS-----DYFIKGGVKPQSVETEMTSNTAYHSEDEE 156


>ref|NP_565193.1| uncharacterized protein [Arabidopsis thaliana]
           gi|98961095|gb|ABF59031.1| At1g78890 [Arabidopsis
           thaliana] gi|110738174|dbj|BAF01018.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332198048|gb|AEE36169.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 155

 Score =  113 bits (282), Expect = 9e-23
 Identities = 54/103 (52%), Positives = 73/103 (70%), Gaps = 1/103 (0%)
 Frame = -3

Query: 884 IRRLEDAIHGIIVKRSAPDWLPFVPGSSYWV-PPRKRPYGFVELVEKLANPLTAEENLSL 708
           + +LEDA+H I+V+RSAPDWLPFVPG+S+WV PPR + +G  +LVEKLANP++ EE++S+
Sbjct: 59  VNKLEDAVHRIMVRRSAPDWLPFVPGASFWVPPPRSQSHGIAKLVEKLANPISDEESISI 118

Query: 707 ASVRGYPASSYFVDDYFVGARASPYPVDIETNSEKLSQSEDEE 579
           +SVRG+P S YF+          P  V+ E  S     SEDEE
Sbjct: 119 SSVRGWPCSDYFIKG------VKPQSVETEMTSNTAYHSEDEE 155


>gb|AAM64669.1| unknown [Arabidopsis thaliana]
          Length = 155

 Score =  113 bits (282), Expect = 9e-23
 Identities = 54/103 (52%), Positives = 73/103 (70%), Gaps = 1/103 (0%)
 Frame = -3

Query: 884 IRRLEDAIHGIIVKRSAPDWLPFVPGSSYWV-PPRKRPYGFVELVEKLANPLTAEENLSL 708
           + +LEDA+H I+V+RSAPDWLPFVPG+S+WV PPR + +G  +LVEKLANP++ EE++S+
Sbjct: 59  VNKLEDAVHRIMVRRSAPDWLPFVPGASFWVPPPRSQSHGIAKLVEKLANPISDEESISI 118

Query: 707 ASVRGYPASSYFVDDYFVGARASPYPVDIETNSEKLSQSEDEE 579
           +SVRG+P S YF+          P  V+ E  S     SEDEE
Sbjct: 119 SSVRGWPCSDYFIKG------VKPQSVETEMTSNTAYHSEDEE 155


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