BLASTX nr result

ID: Cimicifuga21_contig00014936 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00014936
         (199 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533032.1| multidrug resistance-associated protein 2, 6...   113   2e-23
ref|XP_003634755.1| PREDICTED: ABC transporter C family member 3...   110   1e-22
ref|XP_003634754.1| PREDICTED: ABC transporter C family member 3...   110   1e-22
emb|CBI39701.3| unnamed protein product [Vitis vinifera]              110   1e-22
emb|CBI39698.3| unnamed protein product [Vitis vinifera]              110   1e-22

>ref|XP_002533032.1| multidrug resistance-associated protein 2, 6 (mrp2, 6),
            abc-transoprter, putative [Ricinus communis]
            gi|223527170|gb|EEF29340.1| multidrug
            resistance-associated protein 2, 6 (mrp2, 6),
            abc-transoprter, putative [Ricinus communis]
          Length = 1233

 Score =  113 bits (282), Expect = 2e-23
 Identities = 53/66 (80%), Positives = 61/66 (92%)
 Frame = +1

Query: 1    AFLIVQIVGVIAVMSQVAWPVFIVFIPVIGTCIWYQQYYISSARELSRLIGVSKAPLIQH 180
            AF ++Q++G+IAVMSQVAW VFIVFIPVI  CIWYQQYYI+SARELSRLIGV KAP+IQH
Sbjct: 872  AFSMIQLLGIIAVMSQVAWQVFIVFIPVIAACIWYQQYYIASARELSRLIGVCKAPVIQH 931

Query: 181  FAESIS 198
            FAE+IS
Sbjct: 932  FAETIS 937


>ref|XP_003634755.1| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera]
          Length = 1488

 Score =  110 bits (275), Expect = 1e-22
 Identities = 51/66 (77%), Positives = 60/66 (90%)
 Frame = +1

Query: 1    AFLIVQIVGVIAVMSQVAWPVFIVFIPVIGTCIWYQQYYISSARELSRLIGVSKAPLIQH 180
            AF ++Q++G+IAVMSQVAW VFIVFIPVI TCIWYQQYYI SARELSRL GV KAP+IQH
Sbjct: 1039 AFQLIQLLGIIAVMSQVAWQVFIVFIPVIATCIWYQQYYIPSARELSRLAGVCKAPVIQH 1098

Query: 181  FAESIS 198
            F+E+I+
Sbjct: 1099 FSETIA 1104


>ref|XP_003634754.1| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera]
          Length = 2021

 Score =  110 bits (275), Expect = 1e-22
 Identities = 51/66 (77%), Positives = 60/66 (90%)
 Frame = +1

Query: 1    AFLIVQIVGVIAVMSQVAWPVFIVFIPVIGTCIWYQQYYISSARELSRLIGVSKAPLIQH 180
            AF ++Q++G+IAVMSQVAW VFIVFIPVI TCIWYQQYYI SARELSRL GV KAP+IQH
Sbjct: 1572 AFQLIQLLGIIAVMSQVAWQVFIVFIPVIATCIWYQQYYIPSARELSRLAGVCKAPVIQH 1631

Query: 181  FAESIS 198
            F+E+I+
Sbjct: 1632 FSETIA 1637


>emb|CBI39701.3| unnamed protein product [Vitis vinifera]
          Length = 1355

 Score =  110 bits (275), Expect = 1e-22
 Identities = 51/66 (77%), Positives = 60/66 (90%)
 Frame = +1

Query: 1    AFLIVQIVGVIAVMSQVAWPVFIVFIPVIGTCIWYQQYYISSARELSRLIGVSKAPLIQH 180
            AF ++Q++G+IAVMSQVAW VFIVFIPVI TCIWYQQYYI SARELSRL GV KAP+IQH
Sbjct: 906  AFQLIQLLGIIAVMSQVAWQVFIVFIPVIATCIWYQQYYIPSARELSRLAGVCKAPVIQH 965

Query: 181  FAESIS 198
            F+E+I+
Sbjct: 966  FSETIA 971


>emb|CBI39698.3| unnamed protein product [Vitis vinifera]
          Length = 832

 Score =  110 bits (275), Expect = 1e-22
 Identities = 51/66 (77%), Positives = 60/66 (90%)
 Frame = +1

Query: 1   AFLIVQIVGVIAVMSQVAWPVFIVFIPVIGTCIWYQQYYISSARELSRLIGVSKAPLIQH 180
           AF ++Q++G+IAVMSQVAW VFIVFIPVI TCIWYQQYYI SARELSRL GV KAP+IQH
Sbjct: 383 AFQLIQLLGIIAVMSQVAWQVFIVFIPVIATCIWYQQYYIPSARELSRLAGVCKAPVIQH 442

Query: 181 FAESIS 198
           F+E+I+
Sbjct: 443 FSETIA 448


Top