BLASTX nr result

ID: Cimicifuga21_contig00014927 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00014927
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297767.1| predicted protein [Populus trichocarpa] gi|2...   102   3e-20
ref|XP_002297766.1| predicted protein [Populus trichocarpa] gi|2...   101   7e-20
ref|XP_002513111.1| lipid binding protein, putative [Ricinus com...   100   2e-19
ref|XP_002267909.1| PREDICTED: uncharacterized protein LOC100244...    97   1e-18
ref|XP_002268727.1| PREDICTED: uncharacterized protein LOC100265...    96   3e-18

>ref|XP_002297767.1| predicted protein [Populus trichocarpa] gi|222845025|gb|EEE82572.1|
           predicted protein [Populus trichocarpa]
          Length = 110

 Score =  102 bits (254), Expect = 3e-20
 Identities = 42/91 (46%), Positives = 64/91 (70%), Gaps = 2/91 (2%)
 Frame = -2

Query: 343 GIMVFPKHQVLGQQCEGDIQGLIRECAQYVQRSGPNTPPSRGCCNILKNVDIPCACKHVT 164
           GI++   H   GQ C+GD+QGLI +CA++VQR+GP   PS+ CC+++K+VDIPC CK++T
Sbjct: 19  GILISSDHVARGQGCQGDLQGLITQCARFVQRAGPQKDPSQECCSVIKSVDIPCVCKYIT 78

Query: 163 KDAKQIISMQKVAYVLKSCGRQIPR--NCGS 77
            + + ++ M KV +V  SCG+ +     CGS
Sbjct: 79  GEIEAVVDMGKVVHVAASCGKPLDHGMKCGS 109


>ref|XP_002297766.1| predicted protein [Populus trichocarpa] gi|222845024|gb|EEE82571.1|
           predicted protein [Populus trichocarpa]
          Length = 134

 Score =  101 bits (251), Expect = 7e-20
 Identities = 45/94 (47%), Positives = 62/94 (65%), Gaps = 2/94 (2%)
 Frame = -2

Query: 343 GIMVFPKHQVLGQQCEGDIQGLIRECAQYVQRSGPNTPPSRGCCNILKNVDIPCACKHVT 164
           GI++   +  LGQ+C GD QGLI +C++YVQ  GP T PS  CCN +K +D+PC CK VT
Sbjct: 40  GILIPSNNVALGQECHGDFQGLITQCSKYVQIQGPQTDPSPDCCNTIKTLDVPCVCKQVT 99

Query: 163 KDAKQIISMQKVAYVLKSCGRQIPR--NCGS*TV 68
            D + +I+M KVA+V + CG  +     CGS T+
Sbjct: 100 NDIEAVINMAKVAHVAQYCGIPLAHGTKCGSFTI 133


>ref|XP_002513111.1| lipid binding protein, putative [Ricinus communis]
           gi|223548122|gb|EEF49614.1| lipid binding protein,
           putative [Ricinus communis]
          Length = 108

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 45/93 (48%), Positives = 64/93 (68%), Gaps = 2/93 (2%)
 Frame = -2

Query: 340 IMVFPKHQVLGQQCEGDIQGLIRECAQYVQRSGPNTPPSRGCCNILKNVDIPCACKHVTK 161
           IM+      L Q C+GD+QGLI ECA+YVQ+ GP   PS+GCCN++K+VDIPCA K+++ 
Sbjct: 15  IMIGNDKVALDQGCQGDLQGLITECAKYVQKLGPERDPSQGCCNVIKSVDIPCAFKYISD 74

Query: 160 DAKQIISMQKVAYVLKSCGRQIPR--NCGS*TV 68
           + + +I M KV +V + C + +P    CGS TV
Sbjct: 75  EIEDVIDMGKVVHVAEFCDKALPHGMKCGSYTV 107


>ref|XP_002267909.1| PREDICTED: uncharacterized protein LOC100244776 [Vitis vinifera]
          Length = 115

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 43/94 (45%), Positives = 61/94 (64%), Gaps = 2/94 (2%)
 Frame = -2

Query: 343 GIMVFPKHQVLGQQCEGDIQGLIRECAQYVQRSGPNTPPSRGCCNILKNVDIPCACKHVT 164
           GI+    + V GQ C GD + L  +C  YVQ+ GP TPPS+GCCN ++ VD+PCAC+H+ 
Sbjct: 18  GILFSGINVVSGQGCRGDFRNLAAQCMPYVQKPGPKTPPSKGCCNAVRTVDVPCACQHLP 77

Query: 163 KDAKQIISMQKVAYVLKSCGRQIP--RNCGS*TV 68
                 +S++KVA+VL+ CG+ +     CGS TV
Sbjct: 78  PGVGGTVSLEKVAFVLRVCGKPLKPGTKCGSYTV 111


>ref|XP_002268727.1| PREDICTED: uncharacterized protein LOC100265450 [Vitis vinifera]
          Length = 115

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 40/82 (48%), Positives = 56/82 (68%), Gaps = 2/82 (2%)
 Frame = -2

Query: 307 QQCEGDIQGLIRECAQYVQRSGPNTPPSRGCCNILKNVDIPCACKHVTKDAKQIISMQKV 128
           Q C+GD   L+ +C QYVQ+ GP TPPS GCCN +  VDIPC C+H+      I+S++KV
Sbjct: 30  QVCKGDFGSLVEQCLQYVQKPGPKTPPSEGCCNAINTVDIPCVCQHLPPVVGDIVSLEKV 89

Query: 127 AYVLKSCGRQIP--RNCGS*TV 68
           A+VL++CG+ +     CG+ TV
Sbjct: 90  AFVLRACGKPLEPGTKCGNYTV 111


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