BLASTX nr result

ID: Cimicifuga21_contig00014917 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00014917
         (692 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278120.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...   183   3e-44
ref|XP_004135555.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...   179   5e-43
ref|XP_002311809.1| predicted protein [Populus trichocarpa] gi|1...   177   2e-42
ref|XP_002468026.1| hypothetical protein SORBIDRAFT_01g038290 [S...   176   3e-42
gb|ACG47288.1| NADH-ubiquinone oxidoreductase 19 kDa subunit [Ze...   176   3e-42

>ref|XP_002278120.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
           subunit 8-B isoform 2 [Vitis vinifera]
           gi|225432428|ref|XP_002278102.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] 1 alpha subcomplex subunit
           8-B isoform 1 [Vitis vinifera]
           gi|297736935|emb|CBI26136.3| unnamed protein product
           [Vitis vinifera]
          Length = 106

 Score =  183 bits (464), Expect = 3e-44
 Identities = 83/106 (78%), Positives = 94/106 (88%)
 Frame = +3

Query: 93  MDRTVDATGEPMPTSAVLMAASKHIATKCRAENVAFLKCKKKDANPETCLHKGREVTQCV 272
           M  TVDA G P+PTSAVLMA+SKHI ++C +ENVAFLKCKK+D NPE CL KGREVT+CV
Sbjct: 1   MASTVDAGGHPIPTSAVLMASSKHIGSRCFSENVAFLKCKKQDPNPEKCLDKGREVTRCV 60

Query: 273 LTLLKDLHQKCTKEMEAYAGCMYYHTNEFDLCRKEQEEFEKACPFD 410
             LLKDLHQ+CTKEM+AYAGCMYYHTNEFDLCRKEQ+EFEKACP +
Sbjct: 61  FGLLKDLHQRCTKEMDAYAGCMYYHTNEFDLCRKEQQEFEKACPLE 106


>ref|XP_004135555.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
           subunit 8-B-like [Cucumis sativus]
           gi|449488520|ref|XP_004158067.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] 1 alpha subcomplex subunit
           8-B-like [Cucumis sativus]
          Length = 106

 Score =  179 bits (454), Expect = 5e-43
 Identities = 79/106 (74%), Positives = 93/106 (87%)
 Frame = +3

Query: 93  MDRTVDATGEPMPTSAVLMAASKHIATKCRAENVAFLKCKKKDANPETCLHKGREVTQCV 272
           M   VDA G+P+PTSAVLM++SKHIA KCR+ENVA+L+CK+KD NPE CL KG +VT+CV
Sbjct: 1   MASAVDAAGDPIPTSAVLMSSSKHIAIKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCV 60

Query: 273 LTLLKDLHQKCTKEMEAYAGCMYYHTNEFDLCRKEQEEFEKACPFD 410
           L+LLKDLHQ+CTKEM+AY GCMYYHTNEFDLCRKEQE FEK CP +
Sbjct: 61  LSLLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEKGCPLE 106


>ref|XP_002311809.1| predicted protein [Populus trichocarpa] gi|118483508|gb|ABK93652.1|
           unknown [Populus trichocarpa]
           gi|118487086|gb|ABK95373.1| unknown [Populus
           trichocarpa] gi|222851629|gb|EEE89176.1| predicted
           protein [Populus trichocarpa]
          Length = 107

 Score =  177 bits (448), Expect = 2e-42
 Identities = 80/102 (78%), Positives = 90/102 (88%)
 Frame = +3

Query: 105 VDATGEPMPTSAVLMAASKHIATKCRAENVAFLKCKKKDANPETCLHKGREVTQCVLTLL 284
           VDATG P+PTSAVL  ASKHIAT+C +ENV FLKCKKKD NPE CL KG++VT+CVL LL
Sbjct: 6   VDATGNPIPTSAVLTTASKHIATRCFSENVEFLKCKKKDPNPEKCLDKGQQVTRCVLGLL 65

Query: 285 KDLHQKCTKEMEAYAGCMYYHTNEFDLCRKEQEEFEKACPFD 410
           KDLHQKCTKEM+AY GCMYY+TNEFDLCRKEQ+ FEKACP +
Sbjct: 66  KDLHQKCTKEMDAYVGCMYYYTNEFDLCRKEQQAFEKACPLE 107


>ref|XP_002468026.1| hypothetical protein SORBIDRAFT_01g038290 [Sorghum bicolor]
           gi|241921880|gb|EER95024.1| hypothetical protein
           SORBIDRAFT_01g038290 [Sorghum bicolor]
          Length = 110

 Score =  176 bits (447), Expect = 3e-42
 Identities = 79/109 (72%), Positives = 93/109 (85%)
 Frame = +3

Query: 87  SSMDRTVDATGEPMPTSAVLMAASKHIATKCRAENVAFLKCKKKDANPETCLHKGREVTQ 266
           S+    VDA+GEP+PTS+VLMAASKHIA +CR ENVAFL CKKKD NPE CL KGR+VT+
Sbjct: 2   SASSAPVDASGEPIPTSSVLMAASKHIAVRCRPENVAFLNCKKKDPNPEKCLEKGRQVTR 61

Query: 267 CVLTLLKDLHQKCTKEMEAYAGCMYYHTNEFDLCRKEQEEFEKACPFDK 413
           CVL+LLK+LHQKC KEM+ YAGCMYY+TNEFD CRKEQ+ FE+ACP  +
Sbjct: 62  CVLSLLKELHQKCPKEMDEYAGCMYYYTNEFDFCRKEQQAFEEACPISE 110


>gb|ACG47288.1| NADH-ubiquinone oxidoreductase 19 kDa subunit [Zea mays]
          Length = 110

 Score =  176 bits (447), Expect = 3e-42
 Identities = 79/109 (72%), Positives = 93/109 (85%)
 Frame = +3

Query: 87  SSMDRTVDATGEPMPTSAVLMAASKHIATKCRAENVAFLKCKKKDANPETCLHKGREVTQ 266
           S+    VDA+GEP+PTS+VLMAASKHIA +CR ENVAFL CKKKD NPE CL KGR+VT+
Sbjct: 2   SASSTPVDASGEPIPTSSVLMAASKHIAVRCRPENVAFLNCKKKDPNPEKCLEKGRQVTR 61

Query: 267 CVLTLLKDLHQKCTKEMEAYAGCMYYHTNEFDLCRKEQEEFEKACPFDK 413
           CVL+LLK+LHQKC KEM+ YAGCMYY+TNEFD CRKEQ+ FE+ACP  +
Sbjct: 62  CVLSLLKELHQKCPKEMDEYAGCMYYYTNEFDFCRKEQQAFEEACPISE 110


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