BLASTX nr result

ID: Cimicifuga21_contig00014888 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00014888
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19420.3| unnamed protein product [Vitis vinifera]               99   3e-19
emb|CAN80359.1| hypothetical protein VITISV_002028 [Vitis vinifera]    99   3e-19
ref|XP_002283285.2| PREDICTED: uncharacterized protein LOC100252...    98   6e-19
ref|XP_002510115.1| transcription initiation factor, putative [R...    97   1e-18
ref|XP_003527732.1| PREDICTED: uncharacterized protein LOC100797...    95   7e-18

>emb|CBI19420.3| unnamed protein product [Vitis vinifera]
          Length = 882

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 52/88 (59%), Positives = 65/88 (73%), Gaps = 13/88 (14%)
 Frame = +3

Query: 3    DTTRKPSSTTGRSSRETQD-------------GATRKFGRNPAVMPHTKVARSISVKDVI 143
            D +RK SST+GR++RE Q+             G  RKFGRN A++P T+VAR+I+VKDVI
Sbjct: 794  DASRKLSSTSGRNARENQEAEKRGYSTVVSSPGGVRKFGRNNAIVPQTRVARNITVKDVI 853

Query: 144  AVLEREPQMSKSTLVYRLYERMRSDAPT 227
            +VLEREPQM KSTL+YRLYE+MRS A T
Sbjct: 854  SVLEREPQMLKSTLIYRLYEKMRSGAAT 881


>emb|CAN80359.1| hypothetical protein VITISV_002028 [Vitis vinifera]
          Length = 906

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 52/88 (59%), Positives = 65/88 (73%), Gaps = 13/88 (14%)
 Frame = +3

Query: 3    DTTRKPSSTTGRSSRETQD-------------GATRKFGRNPAVMPHTKVARSISVKDVI 143
            D +RK SST+GR++RE Q+             G  RKFGRN A++P T+VAR+I+VKDVI
Sbjct: 818  DASRKLSSTSGRNARENQEAEKRGYSTVVSSPGGVRKFGRNNAIVPQTRVARNITVKDVI 877

Query: 144  AVLEREPQMSKSTLVYRLYERMRSDAPT 227
            +VLEREPQM KSTL+YRLYE+MRS A T
Sbjct: 878  SVLEREPQMLKSTLIYRLYEKMRSGAAT 905


>ref|XP_002283285.2| PREDICTED: uncharacterized protein LOC100252311 [Vitis vinifera]
          Length = 922

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 51/85 (60%), Positives = 64/85 (75%), Gaps = 10/85 (11%)
 Frame = +3

Query: 3    DTTRKPSSTTGRSSRETQDG----------ATRKFGRNPAVMPHTKVARSISVKDVIAVL 152
            D +RK SST+GR++RE Q+             RKFGRN A++P T+VAR+I+VKDVI+VL
Sbjct: 837  DASRKLSSTSGRNARENQEAEKRGYSTVSCGVRKFGRNNAIVPQTRVARNITVKDVISVL 896

Query: 153  EREPQMSKSTLVYRLYERMRSDAPT 227
            EREPQM KSTL+YRLYE+MRS A T
Sbjct: 897  EREPQMLKSTLIYRLYEKMRSGAAT 921


>ref|XP_002510115.1| transcription initiation factor, putative [Ricinus communis]
            gi|223550816|gb|EEF52302.1| transcription initiation
            factor, putative [Ricinus communis]
          Length = 925

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 51/85 (60%), Positives = 61/85 (71%), Gaps = 10/85 (11%)
 Frame = +3

Query: 3    DTTRKPSSTTGRSSRETQDG----------ATRKFGRNPAVMPHTKVARSISVKDVIAVL 152
            + TRKP  T+G+S ++ Q+             RK GRN A  P +KVARSISVKDVIA L
Sbjct: 840  EVTRKPQFTSGKSMKDNQEPEKRSPAAASTGVRKVGRNQAFTPQSKVARSISVKDVIAAL 899

Query: 153  EREPQMSKSTLVYRLYERMRSDAPT 227
            EREPQMSKSTL+YRLYER++SDAPT
Sbjct: 900  EREPQMSKSTLIYRLYERVQSDAPT 924


>ref|XP_003527732.1| PREDICTED: uncharacterized protein LOC100797127 [Glycine max]
          Length = 933

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 50/83 (60%), Positives = 61/83 (73%), Gaps = 8/83 (9%)
 Frame = +3

Query: 3    DTTRKPSSTTGRSSRETQ--------DGATRKFGRNPAVMPHTKVARSISVKDVIAVLER 158
            D ++K SST+GRS+++ Q         GA RKFGR+ A  P   +ARSISVKDVIAVLER
Sbjct: 850  DVSQKSSSTSGRSTKDNQAREKKGPTSGAGRKFGRSHATTPQNSIARSISVKDVIAVLER 909

Query: 159  EPQMSKSTLVYRLYERMRSDAPT 227
            EPQMSKS+L+YRLYER+ SD  T
Sbjct: 910  EPQMSKSSLLYRLYERIHSDTST 932


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