BLASTX nr result

ID: Cimicifuga21_contig00014872 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00014872
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAM11098.1| ABC protein [Coptis japonica]                         210   1e-52
ref|XP_002320939.1| multidrug/pheromone exporter, MDR family, AB...   196   1e-48
dbj|BAB62040.1| CjMDR1 [Coptis japonica]                              196   2e-48
ref|XP_002320942.1| multidrug/pheromone exporter, MDR family, AB...   194   8e-48
ref|XP_002301547.1| multidrug/pheromone exporter, MDR family, AB...   193   1e-47

>dbj|BAM11098.1| ABC protein [Coptis japonica]
          Length = 1292

 Score =  210 bits (534), Expect = 1e-52
 Identities = 101/138 (73%), Positives = 113/138 (81%)
 Frame = +1

Query: 1   TGEKHAIMQYEKSLQKAYKSSVQEGLASGLGLGTGMLIVFCTYAMAIWFGAKMIIEKGYT 180
           +GEKHAI QYEKSLQKAYKS V EGLASGLGLG  MLI FC+YA+AIWFG +MIIEK YT
Sbjct: 273 SGEKHAITQYEKSLQKAYKSGVHEGLASGLGLGASMLIFFCSYALAIWFGGRMIIEKDYT 332

Query: 181 GGDVINIIVAVLIGSMSLGQASPSLXXXXXXXXXXXKMFETINRKPEIDSYDTNGRILDD 360
           GGD+INII A+L+GS SLGQASP L           KMFETI RKPEIDSYDT GR+LDD
Sbjct: 333 GGDIINIIDAILVGSFSLGQASPCLSAFAAGQAAAFKMFETIKRKPEIDSYDTKGRVLDD 392

Query: 361 IRGDIELRNVCFTYPARP 414
           I GDIEL+++CF+YPARP
Sbjct: 393 IHGDIELKDICFSYPARP 410



 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 38/136 (27%), Positives = 74/136 (54%)
 Frame = +1

Query: 7    EKHAIMQYEKSLQKAYKSSVQEGLASGLGLGTGMLIVFCTYAMAIWFGAKMIIEKGYTGG 186
            E+  +  Y+K  +   K+ +++GL SG+G G    +++  YA + + GA+++ +   T  
Sbjct: 927  EEKVMQLYKKKCEGPMKTGIRQGLISGIGFGVSFFLLYNVYATSFYVGARLVEDGKTTFA 986

Query: 187  DVINIIVAVLIGSMSLGQASPSLXXXXXXXXXXXKMFETINRKPEIDSYDTNGRILDDIR 366
            +V  +  A+ + ++ + Q+S               ++  ++RK +IDS D +G  L+++ 
Sbjct: 987  EVFRVFFALTMAALGISQSSSFAPDSSKARASTASIYGILDRKSKIDSSDDSGITLENLN 1046

Query: 367  GDIELRNVCFTYPARP 414
            GDIELR+V F Y  RP
Sbjct: 1047 GDIELRHVSFKYSTRP 1062


>ref|XP_002320939.1| multidrug/pheromone exporter, MDR family, ABC transporter family
           [Populus trichocarpa] gi|222861712|gb|EEE99254.1|
           multidrug/pheromone exporter, MDR family, ABC
           transporter family [Populus trichocarpa]
          Length = 1294

 Score =  196 bits (499), Expect = 1e-48
 Identities = 96/138 (69%), Positives = 109/138 (78%)
 Frame = +1

Query: 1   TGEKHAIMQYEKSLQKAYKSSVQEGLASGLGLGTGMLIVFCTYAMAIWFGAKMIIEKGYT 180
           TGEK AI  Y+K L  AY S VQEG  +GLGLG  ML+VFCTYA+AIWFG KMI+EKGYT
Sbjct: 266 TGEKQAISNYKKFLATAYNSGVQEGFTAGLGLGIVMLLVFCTYALAIWFGGKMILEKGYT 325

Query: 181 GGDVINIIVAVLIGSMSLGQASPSLXXXXXXXXXXXKMFETINRKPEIDSYDTNGRILDD 360
           GGDV+N+I+AVL GSMSLGQASP +           KMFETINRKPEIDS DT+G+ILDD
Sbjct: 326 GGDVVNVIIAVLTGSMSLGQASPCMSAFAAGQAAAYKMFETINRKPEIDSSDTSGKILDD 385

Query: 361 IRGDIELRNVCFTYPARP 414
           I GD+ELR+V FTYPARP
Sbjct: 386 ISGDVELRDVYFTYPARP 403



 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 37/136 (27%), Positives = 70/136 (51%)
 Frame = +1

Query: 7    EKHAIMQYEKSLQKAYKSSVQEGLASGLGLGTGMLIVFCTYAMAIWFGAKMIIEKGYTGG 186
            E+  +  Y+K  +   ++ +++GL  G G G    ++F  YA + + GA+++     T  
Sbjct: 927  EEKVMQLYKKKCEGPMETGIKQGLICGTGFGVSFFLLFSVYATSFYAGAQLVQHGKTTFT 986

Query: 187  DVINIIVAVLIGSMSLGQASPSLXXXXXXXXXXXKMFETINRKPEIDSYDTNGRILDDIR 366
            +V  +  A+ + ++ + Q S               +F  I+RK ++D+ D +G  LD +R
Sbjct: 987  EVFRVFFALTMAAIGISQTSSFGPDSSSAKTAAASIFSIIDRKSKMDASDESGTKLDSVR 1046

Query: 367  GDIELRNVCFTYPARP 414
            G+IEL ++ F YP RP
Sbjct: 1047 GEIELHHISFKYPTRP 1062


>dbj|BAB62040.1| CjMDR1 [Coptis japonica]
          Length = 1289

 Score =  196 bits (497), Expect = 2e-48
 Identities = 95/138 (68%), Positives = 110/138 (79%)
 Frame = +1

Query: 1   TGEKHAIMQYEKSLQKAYKSSVQEGLASGLGLGTGMLIVFCTYAMAIWFGAKMIIEKGYT 180
           TGEKHA+ QYEK L KAY + + EGLASG+GLG+ +L++FC+Y++A+WFG KMIIEKGY 
Sbjct: 270 TGEKHAVTQYEKYLNKAYLAGIHEGLASGVGLGSVLLVIFCSYSLAVWFGGKMIIEKGYN 329

Query: 181 GGDVINIIVAVLIGSMSLGQASPSLXXXXXXXXXXXKMFETINRKPEIDSYDTNGRILDD 360
           GG+VINIIVAVL GSMSLGQASP L           KM ETI RKPEIDSYDT+G   DD
Sbjct: 330 GGNVINIIVAVLTGSMSLGQASPCLGAFAAGQAAAYKMLETIKRKPEIDSYDTSGHKSDD 389

Query: 361 IRGDIELRNVCFTYPARP 414
           IRGDIELR+V FTYPARP
Sbjct: 390 IRGDIELRDVSFTYPARP 407



 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 39/136 (28%), Positives = 75/136 (55%)
 Frame = +1

Query: 7    EKHAIMQYEKSLQKAYKSSVQEGLASGLGLGTGMLIVFCTYAMAIWFGAKMIIEKGYTGG 186
            E+  +  Y+K  +   K+ +++GL SG+G G    ++F  YA + + GA+++     T  
Sbjct: 924  EEKVMQLYKKKCEGPMKTGIRQGLISGIGFGISFFLLFNVYATSFYAGARLVDAGKTTFS 983

Query: 187  DVINIIVAVLIGSMSLGQASPSLXXXXXXXXXXXKMFETINRKPEIDSYDTNGRILDDIR 366
            DV  +  A+ + ++ + Q+S               +F  ++RK +IDS D +G  +++++
Sbjct: 984  DVFRVFFALTMAALGISQSSSLAPDSSKAKSSTASIFGILDRKSKIDSSDESGMTVENVK 1043

Query: 367  GDIELRNVCFTYPARP 414
            G+IELR++ F YP RP
Sbjct: 1044 GEIELRHISFKYPTRP 1059


>ref|XP_002320942.1| multidrug/pheromone exporter, MDR family, ABC transporter family
           [Populus trichocarpa] gi|222861715|gb|EEE99257.1|
           multidrug/pheromone exporter, MDR family, ABC
           transporter family [Populus trichocarpa]
          Length = 1294

 Score =  194 bits (492), Expect = 8e-48
 Identities = 96/138 (69%), Positives = 108/138 (78%)
 Frame = +1

Query: 1   TGEKHAIMQYEKSLQKAYKSSVQEGLASGLGLGTGMLIVFCTYAMAIWFGAKMIIEKGYT 180
           TGEK AI  Y+K L  AY S VQEG  +GLGLG  ML+VFC+YA+AIWFG KMI+EKGY 
Sbjct: 266 TGEKQAISNYKKFLATAYNSGVQEGFTAGLGLGIVMLLVFCSYALAIWFGGKMILEKGYN 325

Query: 181 GGDVINIIVAVLIGSMSLGQASPSLXXXXXXXXXXXKMFETINRKPEIDSYDTNGRILDD 360
           GGDVIN+IVAVL GSMSLGQASP +           KMFETINRKPEIDS DT+G+ILDD
Sbjct: 326 GGDVINVIVAVLTGSMSLGQASPCMSAFAAGQAAAYKMFETINRKPEIDSSDTSGKILDD 385

Query: 361 IRGDIELRNVCFTYPARP 414
           I GD+ELR+V FTYPARP
Sbjct: 386 ISGDVELRDVYFTYPARP 403



 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 37/136 (27%), Positives = 71/136 (52%)
 Frame = +1

Query: 7    EKHAIMQYEKSLQKAYKSSVQEGLASGLGLGTGMLIVFCTYAMAIWFGAKMIIEKGYTGG 186
            E+  +  Y +  +   ++ +++G+ SG G G    ++F  YA   + GA+++        
Sbjct: 927  EEKVMQLYRRKCEGPMRTGIRQGMISGTGFGVSFFLLFSVYATTFYVGAQLVRHGKTNFA 986

Query: 187  DVINIIVAVLIGSMSLGQASPSLXXXXXXXXXXXKMFETINRKPEIDSYDTNGRILDDIR 366
            DV  +  A+ + ++ + Q+S               +F  I+RK +ID  D +G  LD+++
Sbjct: 987  DVFRVFFALTMAAIGISQSSSFAPDSSKAKGAAASIFAIIDRKSKIDPSDESGTTLDNVK 1046

Query: 367  GDIELRNVCFTYPARP 414
            G+IELR++ F YP+RP
Sbjct: 1047 GEIELRHISFKYPSRP 1062


>ref|XP_002301547.1| multidrug/pheromone exporter, MDR family, ABC transporter family
           [Populus trichocarpa] gi|222843273|gb|EEE80820.1|
           multidrug/pheromone exporter, MDR family, ABC
           transporter family [Populus trichocarpa]
          Length = 1224

 Score =  193 bits (491), Expect = 1e-47
 Identities = 95/138 (68%), Positives = 109/138 (78%)
 Frame = +1

Query: 1   TGEKHAIMQYEKSLQKAYKSSVQEGLASGLGLGTGMLIVFCTYAMAIWFGAKMIIEKGYT 180
           TGEK AI  Y+K L  AY S VQEGLA+G+GLG  ML+VFC+YA+A+WFG +MI+EKGYT
Sbjct: 200 TGEKQAISNYKKFLVTAYNSGVQEGLAAGVGLGIVMLVVFCSYALAVWFGGRMILEKGYT 259

Query: 181 GGDVINIIVAVLIGSMSLGQASPSLXXXXXXXXXXXKMFETINRKPEIDSYDTNGRILDD 360
           GGDVIN+IVAVL GSMSLGQASP +           KMFE INRKPEID+ DT G+ILDD
Sbjct: 260 GGDVINVIVAVLTGSMSLGQASPCMSAFASGQAAAYKMFEAINRKPEIDASDTRGKILDD 319

Query: 361 IRGDIELRNVCFTYPARP 414
           IRGDIELR+V F YPARP
Sbjct: 320 IRGDIELRDVYFNYPARP 337



 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 42/136 (30%), Positives = 74/136 (54%)
 Frame = +1

Query: 7    EKHAIMQYEKSLQKAYKSSVQEGLASGLGLGTGMLIVFCTYAMAIWFGAKMIIEKGYTGG 186
            E+  +  Y K  +   ++ +++GL SG G G    ++F  YA + + GA+++     T  
Sbjct: 857  EEKVMQLYRKKCEGPMRTGIRQGLISGAGFGVSFFLLFSVYATSFYVGAQLVQHGKTTFA 916

Query: 187  DVINIIVAVLIGSMSLGQASPSLXXXXXXXXXXXKMFETINRKPEIDSYDTNGRILDDIR 366
            DV  +  A+ + ++ + Q+S               +F  I+RK +IDS D +G  LD+++
Sbjct: 917  DVFQVFFALTMAAIGISQSSSFAPDSSKAKAAAASIFSIIDRKSQIDSSDESGTTLDNVK 976

Query: 367  GDIELRNVCFTYPARP 414
            G+IELR++ F YPARP
Sbjct: 977  GEIELRHIGFKYPARP 992


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