BLASTX nr result
ID: Cimicifuga21_contig00014865
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00014865
(1490 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002325916.1| predicted protein [Populus trichocarpa] gi|2... 581 e-163
ref|XP_002531352.1| ribosomal RNA methyltransferase, putative [R... 579 e-163
ref|XP_002278921.1| PREDICTED: putative ribosomal RNA methyltran... 577 e-162
ref|XP_003545938.1| PREDICTED: putative ribosomal RNA methyltran... 576 e-162
ref|XP_003593568.1| rRNA methyltransferase-like protein [Medicag... 572 e-161
>ref|XP_002325916.1| predicted protein [Populus trichocarpa] gi|222862791|gb|EEF00298.1|
predicted protein [Populus trichocarpa]
Length = 316
Score = 581 bits (1497), Expect = e-163
Identities = 286/305 (93%), Positives = 294/305 (96%)
Frame = +3
Query: 168 MGRASRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLS 347
MGRASRDKRDIYYRKAKEEGWRARSAFKL+QIDEEFNIFEGVKRVVDLCAAPGSWSQVLS
Sbjct: 1 MGRASRDKRDIYYRKAKEEGWRARSAFKLIQIDEEFNIFEGVKRVVDLCAAPGSWSQVLS 60
Query: 348 RKLYLPVKLSPERRDSDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIKHFDGCKA 527
RKLYLP KLSP+ RD+DLPLIVAIDLQPMA IEGVIQVQGDITNARTAEVVI+HFDG KA
Sbjct: 61 RKLYLPAKLSPDSRDNDLPLIVAIDLQPMALIEGVIQVQGDITNARTAEVVIRHFDGSKA 120
Query: 528 DLVVCDGAPDVTGLHDMDEFVQSQLILAGLTIVAHVLNVGGKFIAKIFRGKDTSLLYCQL 707
DLVVCDGAPDVTGLHDMDEFVQSQLILAGLTIV HVL GGKFIAKIFRGKDTSLLYCQL
Sbjct: 121 DLVVCDGAPDVTGLHDMDEFVQSQLILAGLTIVTHVLKEGGKFIAKIFRGKDTSLLYCQL 180
Query: 708 KLFFSVVTFAKPKSSRNSSIEAFAVCENYSPPEGFSPKDLHRLLEKVGSPTGVDDLDCSS 887
KLFF VVTFAKPKSSRNSSIEAFAVCENYSPPEGF PKDLHRLLEKVGSP+G DDLDCSS
Sbjct: 181 KLFFPVVTFAKPKSSRNSSIEAFAVCENYSPPEGFDPKDLHRLLEKVGSPSGADDLDCSS 240
Query: 888 GWLEGANKVYIPFLACGDLSGFDSDRSYPLPEVADGTYQSLDPVQPPIAPPYKRALEMKK 1067
GWLEGA+KVYIPFLACGDLSG+DSDRSYPLP+ ADGTYQSLDPVQPPIAPPYKRALEMKK
Sbjct: 241 GWLEGASKVYIPFLACGDLSGYDSDRSYPLPKDADGTYQSLDPVQPPIAPPYKRALEMKK 300
Query: 1068 ASSHG 1082
ASSHG
Sbjct: 301 ASSHG 305
>ref|XP_002531352.1| ribosomal RNA methyltransferase, putative [Ricinus communis]
gi|223529050|gb|EEF31036.1| ribosomal RNA
methyltransferase, putative [Ricinus communis]
Length = 316
Score = 579 bits (1492), Expect = e-163
Identities = 282/305 (92%), Positives = 295/305 (96%)
Frame = +3
Query: 168 MGRASRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLS 347
MG+ASRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLS
Sbjct: 1 MGKASRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLS 60
Query: 348 RKLYLPVKLSPERRDSDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIKHFDGCKA 527
RKLYLP KL+ + RD +LPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVI+HFDGCKA
Sbjct: 61 RKLYLPAKLTQDSRDDNLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKA 120
Query: 528 DLVVCDGAPDVTGLHDMDEFVQSQLILAGLTIVAHVLNVGGKFIAKIFRGKDTSLLYCQL 707
DLVVCDGAPDVTGLHDMDEFVQSQLILAGLTIV H+L GGKFIAKIFRGKDTSLLYCQL
Sbjct: 121 DLVVCDGAPDVTGLHDMDEFVQSQLILAGLTIVTHILREGGKFIAKIFRGKDTSLLYCQL 180
Query: 708 KLFFSVVTFAKPKSSRNSSIEAFAVCENYSPPEGFSPKDLHRLLEKVGSPTGVDDLDCSS 887
KLFF VVTFAKPKSSRNSSIEAFAVCENYSPPEGF+PKDLHRLLEKVGSP+G+DDLDCSS
Sbjct: 181 KLFFPVVTFAKPKSSRNSSIEAFAVCENYSPPEGFNPKDLHRLLEKVGSPSGMDDLDCSS 240
Query: 888 GWLEGANKVYIPFLACGDLSGFDSDRSYPLPEVADGTYQSLDPVQPPIAPPYKRALEMKK 1067
GWLEG NKVYIPFLACGDLSG+DSDRSYPLP+VA+GTYQSLDPVQPPIAPPYKRALEMKK
Sbjct: 241 GWLEGPNKVYIPFLACGDLSGYDSDRSYPLPKVAEGTYQSLDPVQPPIAPPYKRALEMKK 300
Query: 1068 ASSHG 1082
AS+ G
Sbjct: 301 ASNRG 305
>ref|XP_002278921.1| PREDICTED: putative ribosomal RNA methyltransferase 1 [Vitis
vinifera] gi|297740237|emb|CBI30419.3| unnamed protein
product [Vitis vinifera]
Length = 316
Score = 577 bits (1488), Expect = e-162
Identities = 281/305 (92%), Positives = 293/305 (96%)
Frame = +3
Query: 168 MGRASRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLS 347
MG+ASRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLS
Sbjct: 1 MGKASRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLS 60
Query: 348 RKLYLPVKLSPERRDSDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIKHFDGCKA 527
RKL+LP KLSP RD DLPLIVAIDLQPMAPIEGVIQVQGDITNARTAE+VI+HFDGCKA
Sbjct: 61 RKLFLPAKLSPASRDGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAELVIRHFDGCKA 120
Query: 528 DLVVCDGAPDVTGLHDMDEFVQSQLILAGLTIVAHVLNVGGKFIAKIFRGKDTSLLYCQL 707
DLVVCDGAPDVTGLHDMDEFVQSQLILAGLTIV HVL GGKFIAKIFRGKDTSLLYCQL
Sbjct: 121 DLVVCDGAPDVTGLHDMDEFVQSQLILAGLTIVTHVLKKGGKFIAKIFRGKDTSLLYCQL 180
Query: 708 KLFFSVVTFAKPKSSRNSSIEAFAVCENYSPPEGFSPKDLHRLLEKVGSPTGVDDLDCSS 887
KLFF +VTFAKPKSSRNSSIEAFAVCENYSPPEGF+ KDLHRLLEKVGSP+G DDLDC S
Sbjct: 181 KLFFPIVTFAKPKSSRNSSIEAFAVCENYSPPEGFNEKDLHRLLEKVGSPSGADDLDCRS 240
Query: 888 GWLEGANKVYIPFLACGDLSGFDSDRSYPLPEVADGTYQSLDPVQPPIAPPYKRALEMKK 1067
GWLEG NKVYIPFLACGDLSG+DSD+SYPLP+VA+GTYQSLDPVQPPIAPPYKRALE+KK
Sbjct: 241 GWLEGPNKVYIPFLACGDLSGYDSDQSYPLPKVAEGTYQSLDPVQPPIAPPYKRALELKK 300
Query: 1068 ASSHG 1082
ASSHG
Sbjct: 301 ASSHG 305
>ref|XP_003545938.1| PREDICTED: putative ribosomal RNA methyltransferase 1-like [Glycine
max]
Length = 316
Score = 576 bits (1484), Expect = e-162
Identities = 280/305 (91%), Positives = 293/305 (96%)
Frame = +3
Query: 168 MGRASRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLS 347
MGRASRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFN+F+GVKRVVDLCAAPGSWSQVLS
Sbjct: 1 MGRASRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNLFDGVKRVVDLCAAPGSWSQVLS 60
Query: 348 RKLYLPVKLSPERRDSDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIKHFDGCKA 527
RKLYLP KL+P+ +D +LPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVI+HFDGCKA
Sbjct: 61 RKLYLPAKLAPDAKDENLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKA 120
Query: 528 DLVVCDGAPDVTGLHDMDEFVQSQLILAGLTIVAHVLNVGGKFIAKIFRGKDTSLLYCQL 707
DLVVCDGAPDVTGLHDMDEFVQSQL+LAGLTIV HVL GGKFIAKIFRGKDTSLLYCQL
Sbjct: 121 DLVVCDGAPDVTGLHDMDEFVQSQLLLAGLTIVTHVLKEGGKFIAKIFRGKDTSLLYCQL 180
Query: 708 KLFFSVVTFAKPKSSRNSSIEAFAVCENYSPPEGFSPKDLHRLLEKVGSPTGVDDLDCSS 887
KLFF VVTFAKPKSSRNSSIEAFAVCENYSPPEGF+PKDLHRLLEKVGSP+GVDD DC S
Sbjct: 181 KLFFPVVTFAKPKSSRNSSIEAFAVCENYSPPEGFNPKDLHRLLEKVGSPSGVDDTDCCS 240
Query: 888 GWLEGANKVYIPFLACGDLSGFDSDRSYPLPEVADGTYQSLDPVQPPIAPPYKRALEMKK 1067
GWLEG NKVYIPFLACGDLSG+DSDRSYPLP+VA GTYQSLDPVQPPIAPPYKRALE+KK
Sbjct: 241 GWLEGPNKVYIPFLACGDLSGYDSDRSYPLPKVAGGTYQSLDPVQPPIAPPYKRALELKK 300
Query: 1068 ASSHG 1082
ASS G
Sbjct: 301 ASSQG 305
>ref|XP_003593568.1| rRNA methyltransferase-like protein [Medicago truncatula]
gi|355482616|gb|AES63819.1| rRNA methyltransferase-like
protein [Medicago truncatula]
Length = 316
Score = 572 bits (1474), Expect = e-161
Identities = 279/305 (91%), Positives = 292/305 (95%)
Frame = +3
Query: 168 MGRASRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLS 347
MG+ASRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLS
Sbjct: 1 MGKASRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLS 60
Query: 348 RKLYLPVKLSPERRDSDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIKHFDGCKA 527
RKLYLP KL+P+ +D +LPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVI+HFDGCKA
Sbjct: 61 RKLYLPAKLAPDAKDENLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKA 120
Query: 528 DLVVCDGAPDVTGLHDMDEFVQSQLILAGLTIVAHVLNVGGKFIAKIFRGKDTSLLYCQL 707
+LVVCDGAPDVTGLHDMDEFVQSQLILAGLTIV HVL GGKFIAKIFRGKDTSLLYCQL
Sbjct: 121 NLVVCDGAPDVTGLHDMDEFVQSQLILAGLTIVTHVLKEGGKFIAKIFRGKDTSLLYCQL 180
Query: 708 KLFFSVVTFAKPKSSRNSSIEAFAVCENYSPPEGFSPKDLHRLLEKVGSPTGVDDLDCSS 887
KLFF VVTFAKPKSSRNSSIEAFAVCENYSPPEGF+PKDLHRLLEKVGSP+GVDD DC S
Sbjct: 181 KLFFPVVTFAKPKSSRNSSIEAFAVCENYSPPEGFNPKDLHRLLEKVGSPSGVDDTDCVS 240
Query: 888 GWLEGANKVYIPFLACGDLSGFDSDRSYPLPEVADGTYQSLDPVQPPIAPPYKRALEMKK 1067
GWLEG NKVYIPFLACGDL+G+DSDRSYPLP+VA GTYQSLDPVQPPIAPPYKRALE+KK
Sbjct: 241 GWLEGPNKVYIPFLACGDLTGYDSDRSYPLPKVAGGTYQSLDPVQPPIAPPYKRALELKK 300
Query: 1068 ASSHG 1082
AS G
Sbjct: 301 ASPQG 305