BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00014860
         (685 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004149897.1| PREDICTED: preprotein translocase subunit SC...    93   4e-17
ref|XP_004169068.1| PREDICTED: preprotein translocase subunit SC...    91   2e-16
gb|AEL16645.1| protein translocase SecY subunit [Dimocarpus longan]    90   5e-16
gb|AAB60305.1| SecY homolog; targetted to the thylakoid membrane...    89   8e-16
ref|XP_002886190.1| hypothetical protein ARALYDRAFT_480774 [Arab...    89   8e-16

>ref|XP_004149897.1| PREDICTED: preprotein translocase subunit SCY1, chloroplastic-like
           [Cucumis sativus]
          Length = 571

 Score = 93.2 bits (230), Expect = 4e-17
 Identities = 50/55 (90%), Positives = 51/55 (92%), Gaps = 4/55 (7%)
 Frame = +3

Query: 3   GSAFLAVLAAGPAVIEQTTHLTAFRGFAGTSVLILVGC----ARKVQAEIISQKK 155
           GSAFLA+LAAGPAVIEQTTHLTAFRGFAGTSVLILVGC    ARKVQAEIISQKK
Sbjct: 479 GSAFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKK 533


>ref|XP_004169068.1| PREDICTED: preprotein translocase subunit SCY1, chloroplastic-like
           [Cucumis sativus]
          Length = 546

 Score = 91.3 bits (225), Expect = 2e-16
 Identities = 49/54 (90%), Positives = 50/54 (92%), Gaps = 4/54 (7%)
 Frame = +3

Query: 3   GSAFLAVLAAGPAVIEQTTHLTAFRGFAGTSVLILVGC----ARKVQAEIISQK 152
           GSAFLA+LAAGPAVIEQTTHLTAFRGFAGTSVLILVGC    ARKVQAEIISQK
Sbjct: 479 GSAFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQK 532


>gb|AEL16645.1| protein translocase SecY subunit [Dimocarpus longan]
          Length = 110

 Score = 89.7 bits (221), Expect = 5e-16
 Identities = 48/54 (88%), Positives = 49/54 (90%), Gaps = 4/54 (7%)
 Frame = +3

Query: 3   GSAFLAVLAAGPAVIEQTTHLTAFRGFAGTSVLILVGC----ARKVQAEIISQK 152
           GS FLA+LAAGPAVIEQTTHLTAFRGFAGTSVLILVGC    ARKVQAEIISQK
Sbjct: 46  GSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQK 99


>gb|AAB60305.1| SecY homolog; targetted to the thylakoid membrane; the protein has
           a chloroplast targetting signal, but the processing site
           is not known [Arabidopsis thaliana]
          Length = 551

 Score = 89.0 bits (219), Expect = 8e-16
 Identities = 48/54 (88%), Positives = 49/54 (90%), Gaps = 4/54 (7%)
 Frame = +3

Query: 3   GSAFLAVLAAGPAVIEQTTHLTAFRGFAGTSVLILVGC----ARKVQAEIISQK 152
           GSAFLAVLAAGPAV+EQ THLTAFRGFAGTSVLILVGC    ARKVQAEIISQK
Sbjct: 484 GSAFLAVLAAGPAVVEQITHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQK 537


>ref|XP_002886190.1| hypothetical protein ARALYDRAFT_480774 [Arabidopsis lyrata subsp.
           lyrata] gi|297332030|gb|EFH62449.1| hypothetical protein
           ARALYDRAFT_480774 [Arabidopsis lyrata subsp. lyrata]
          Length = 549

 Score = 89.0 bits (219), Expect = 8e-16
 Identities = 48/54 (88%), Positives = 49/54 (90%), Gaps = 4/54 (7%)
 Frame = +3

Query: 3   GSAFLAVLAAGPAVIEQTTHLTAFRGFAGTSVLILVGC----ARKVQAEIISQK 152
           GSAFLAVLAAGPAV+EQ THLTAFRGFAGTSVLILVGC    ARKVQAEIISQK
Sbjct: 482 GSAFLAVLAAGPAVVEQITHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQK 535