BLASTX nr result
ID: Cimicifuga21_contig00014845
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00014845
(1271 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002329628.1| porin/voltage-dependent anion-selective chan... 310 5e-82
ref|XP_004146313.1| PREDICTED: mitochondrial outer membrane prot... 308 1e-81
ref|XP_002325061.1| porin/voltage-dependent anion-selective chan... 305 2e-80
ref|XP_002272180.1| PREDICTED: mitochondrial outer membrane prot... 299 9e-79
emb|CAN64922.1| hypothetical protein VITISV_017201 [Vitis vinifera] 298 3e-78
>ref|XP_002329628.1| porin/voltage-dependent anion-selective channel protein [Populus
trichocarpa] gi|222870509|gb|EEF07640.1|
porin/voltage-dependent anion-selective channel protein
[Populus trichocarpa]
Length = 275
Score = 310 bits (794), Expect = 5e-82
Identities = 163/285 (57%), Positives = 199/285 (69%), Gaps = 1/285 (0%)
Frame = -1
Query: 1046 SGPAPFSDIGKRVKDLLTKDYNFDHKLILTIPSDNGMLVTATGASRDHIFVGDISTQYKS 867
S PAPFSDIGKR KDLLTKDYN+DHK L+I S GM TATG +D +FVGDI+T YKS
Sbjct: 3 SKPAPFSDIGKRAKDLLTKDYNYDHKFTLSILSSTGMAFTATGLKKDEVFVGDINTLYKS 62
Query: 866 RSTTVDVKVDTCSNVSTTLTVNEIFPSTKAALRYQXXXXXXXXXXXXXXXXXXXXXXXXX 687
++T VDVKVDT SNVST +TVN+I PSTKAA ++
Sbjct: 63 KNTVVDVKVDTYSNVSTKVTVNDILPSTKAAFSFKIPDHKSGKLDVQYFHHHAAIESSIG 122
Query: 686 XXXXXXXXXXXXXSPVLEFAAAIGSKELSLGGEIGFDTSTASFTKYNTGIGLHTPDLSAA 507
+P+L+F+AAIGS LSLGGE+GFDT+++SF KYN GIGL+ PD SAA
Sbjct: 123 LNP----------NPLLDFSAAIGSSNLSLGGEVGFDTASSSFIKYNAGIGLNKPDFSAA 172
Query: 506 LLLTDKGETLKLSYIQSVNPITGTTVAAEMTHKLTTYENTCTFGASYAIDPSTLIKTRIS 327
LLLTDKG+TLK SY+ SVNP +VAAEMTH+ ++ EN+ T G+S+A+DP T++KTR S
Sbjct: 173 LLLTDKGQTLKASYVHSVNPF--HSVAAEMTHRFSSLENSFTIGSSHAVDPFTVVKTRFS 230
Query: 326 HNGRVGMLWQREWMPKSLITFSAEYDSKAIHQP-PRLGLTLALKP 195
NG+ ML+Q EW PKSLITFSAEYDSKA H P+ G+ LALKP
Sbjct: 231 DNGKAAMLYQHEWRPKSLITFSAEYDSKATHAANPKYGIALALKP 275
>ref|XP_004146313.1| PREDICTED: mitochondrial outer membrane protein porin 4-like [Cucumis
sativus]
Length = 276
Score = 308 bits (790), Expect = 1e-81
Identities = 157/284 (55%), Positives = 196/284 (69%)
Frame = -1
Query: 1046 SGPAPFSDIGKRVKDLLTKDYNFDHKLILTIPSDNGMLVTATGASRDHIFVGDISTQYKS 867
S P PFSDIGK+ +DLLTKDYNFDHK L +P+ +GM +TATG RD IF+GDIST YKS
Sbjct: 3 SSPPPFSDIGKKARDLLTKDYNFDHKFTLLLPNSDGMGLTATGLKRDQIFIGDISTLYKS 62
Query: 866 RSTTVDVKVDTCSNVSTTLTVNEIFPSTKAALRYQXXXXXXXXXXXXXXXXXXXXXXXXX 687
TTVDVK+DT SNVST +TV +I P+TKA L ++
Sbjct: 63 GKTTVDVKIDTYSNVSTKVTVTDILPTTKATLSFRVPDHKSGKLDVQYFHPHAAIDSSIG 122
Query: 686 XXXXXXXXXXXXXSPVLEFAAAIGSKELSLGGEIGFDTSTASFTKYNTGIGLHTPDLSAA 507
SP+LEF+AAIGSK SLGG++GFDT++ASFTKYN GI L+ D SAA
Sbjct: 123 LHP----------SPLLEFSAAIGSKNCSLGGDVGFDTTSASFTKYNAGISLNKSDFSAA 172
Query: 506 LLLTDKGETLKLSYIQSVNPITGTTVAAEMTHKLTTYENTCTFGASYAIDPSTLIKTRIS 327
L+LTDKG+ LK SY+ S++P+ T VAAEMTHK +T EN+ T G+S+ +DP TL+KTR S
Sbjct: 173 LMLTDKGQALKASYVHSLDPLNETMVAAEMTHKFSTSENSFTIGSSHVLDPVTLMKTRFS 232
Query: 326 HNGRVGMLWQREWMPKSLITFSAEYDSKAIHQPPRLGLTLALKP 195
G+ ML+QR+W PKSL+T SAEYDSKAI P++GL +ALKP
Sbjct: 233 DKGKAAMLFQRQWRPKSLVTLSAEYDSKAIDSSPKIGLAIALKP 276
>ref|XP_002325061.1| porin/voltage-dependent anion-selective channel protein [Populus
trichocarpa] gi|118489666|gb|ABK96634.1| unknown [Populus
trichocarpa x Populus deltoides]
gi|222866495|gb|EEF03626.1| porin/voltage-dependent
anion-selective channel protein [Populus trichocarpa]
Length = 275
Score = 305 bits (780), Expect = 2e-80
Identities = 164/285 (57%), Positives = 198/285 (69%), Gaps = 1/285 (0%)
Frame = -1
Query: 1046 SGPAPFSDIGKRVKDLLTKDYNFDHKLILTIPSDNGMLVTATGASRDHIFVGDISTQYKS 867
S PAPFSDIGKR KDLLTKDYN+DHK L+I S GM TATG +D IF GDIST Y+S
Sbjct: 3 SKPAPFSDIGKRAKDLLTKDYNYDHKFTLSILSSTGMGFTATGLKKDEIFNGDISTLYRS 62
Query: 866 RSTTVDVKVDTCSNVSTTLTVNEIFPSTKAALRYQXXXXXXXXXXXXXXXXXXXXXXXXX 687
++T VDVKVDT S VST +TVN+IFPSTKAAL ++
Sbjct: 63 KNTVVDVKVDTYSIVSTKVTVNDIFPSTKAALSFKIPDHKSGKLDVQYLHHHAAIDSSIG 122
Query: 686 XXXXXXXXXXXXXSPVLEFAAAIGSKELSLGGEIGFDTSTASFTKYNTGIGLHTPDLSAA 507
+P+LE +AAIGS LS+GGE+GFDT+++SF K N GIGL+ PD SAA
Sbjct: 123 LNP----------NPLLELSAAIGSNNLSVGGEVGFDTASSSFVKCNAGIGLNKPDFSAA 172
Query: 506 LLLTDKGETLKLSYIQSVNPITGTTVAAEMTHKLTTYENTCTFGASYAIDPSTLIKTRIS 327
LLTDKG+TLK SY+ SVNP+ +VAAEMTHKL+++EN+ T G+S+A+DP T++KTR S
Sbjct: 173 FLLTDKGQTLKASYVHSVNPLH--SVAAEMTHKLSSFENSFTIGSSHAVDPFTVVKTRFS 230
Query: 326 HNGRVGMLWQREWMPKSLITFSAEYDSKAIH-QPPRLGLTLALKP 195
NG+ ML Q EW PKSLITFSAEYDSKA H P+ GL LALKP
Sbjct: 231 DNGKAAMLCQHEWRPKSLITFSAEYDSKATHAAAPKFGLALALKP 275
>ref|XP_002272180.1| PREDICTED: mitochondrial outer membrane protein porin of 36 kDa
[Vitis vinifera] gi|297735387|emb|CBI17827.3| unnamed
protein product [Vitis vinifera]
Length = 277
Score = 299 bits (766), Expect = 9e-79
Identities = 157/285 (55%), Positives = 195/285 (68%), Gaps = 1/285 (0%)
Frame = -1
Query: 1046 SGPAPFSDIGKRVKDLLTKDYNFDHKLILTIPSDNGMLVTATGASRDHIFVGDISTQYKS 867
+GPAPFSDIGK+ +DLL KDYNFDHK L + S GM VTATG +D IF GD+ST YKS
Sbjct: 3 NGPAPFSDIGKKTRDLLNKDYNFDHKFTLLMQSPGGMGVTATGWKKDQIFFGDVSTLYKS 62
Query: 866 RSTTVDVKVDTCSNVSTTLTVNEIFPSTKAALRYQXXXXXXXXXXXXXXXXXXXXXXXXX 687
+TTVD+K+DT SNVST +T ++I P TK A ++
Sbjct: 63 GNTTVDLKLDTHSNVSTKVTAHDILPCTKVACSFKIPDHKSGKLDVQYLHPHAAIDSSIG 122
Query: 686 XXXXXXXXXXXXXSPVLEFAAAIGSKELSLGGEIGFDTSTASFTKYNTGIGLHTPDLSAA 507
+P+LE +AAIGSK+LSLGGE+G +T++ASFTKYN GIG++ PD S A
Sbjct: 123 LNP----------TPLLELSAAIGSKDLSLGGEVGLNTASASFTKYNAGIGINKPDFSVA 172
Query: 506 LLLTDKGETLKLSYIQSVNP-ITGTTVAAEMTHKLTTYENTCTFGASYAIDPSTLIKTRI 330
+LLTDKGETLK SYI SVNP GTTVAAE+THK TYEN+ T G+++ +DP T++KTR+
Sbjct: 173 VLLTDKGETLKASYIHSVNPPYGGTTVAAELTHKFNTYENSFTIGSAHVVDPYTMVKTRL 232
Query: 329 SHNGRVGMLWQREWMPKSLITFSAEYDSKAIHQPPRLGLTLALKP 195
S+NG+ ML QREW PKSLIT S EYD KA + +LGL LALKP
Sbjct: 233 SNNGKFAMLCQREWRPKSLITVSGEYDPKANNGATKLGLALALKP 277
>emb|CAN64922.1| hypothetical protein VITISV_017201 [Vitis vinifera]
Length = 277
Score = 298 bits (762), Expect = 3e-78
Identities = 157/285 (55%), Positives = 194/285 (68%), Gaps = 1/285 (0%)
Frame = -1
Query: 1046 SGPAPFSDIGKRVKDLLTKDYNFDHKLILTIPSDNGMLVTATGASRDHIFVGDISTQYKS 867
+GPAPFSDIGK+ +DLL KDYNFDHK L + S GM VTATG +D IF GD+ST YKS
Sbjct: 3 NGPAPFSDIGKKTRDLLNKDYNFDHKFTLLMQSPGGMGVTATGWKKDQIFFGDVSTLYKS 62
Query: 866 RSTTVDVKVDTCSNVSTTLTVNEIFPSTKAALRYQXXXXXXXXXXXXXXXXXXXXXXXXX 687
+TTVD+K+DT SNVST +T ++I P TK A ++
Sbjct: 63 GNTTVDLKLDTHSNVSTKVTAHDILPCTKVACSFKIPDHKSGKLDVQYLHPHAAIDSSIG 122
Query: 686 XXXXXXXXXXXXXSPVLEFAAAIGSKELSLGGEIGFDTSTASFTKYNTGIGLHTPDLSAA 507
+P+LE +AAIGSK+LSLGGE+G +T++ASFTKYN GIG++ PD S A
Sbjct: 123 LNP----------TPLLELSAAIGSKDLSLGGEVGLNTASASFTKYNAGIGINKPDFSVA 172
Query: 506 LLLTDKGETLKLSYIQSVNP-ITGTTVAAEMTHKLTTYENTCTFGASYAIDPSTLIKTRI 330
+LLTDKGETLK SYI SVNP GTTVAAE+THK TYEN+ T G+++ +DP T+ KTR+
Sbjct: 173 VLLTDKGETLKASYIHSVNPPYGGTTVAAELTHKFNTYENSFTIGSAHVVDPYTMXKTRL 232
Query: 329 SHNGRVGMLWQREWMPKSLITFSAEYDSKAIHQPPRLGLTLALKP 195
S+NG+ ML QREW PKSLIT S EYD KA + +LGL LALKP
Sbjct: 233 SNNGKFAMLCQREWRPKSLITVSGEYDPKANNGATKLGLALALKP 277