BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00014826
         (1171 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK96574.1| unknown [Populus trichocarpa x Populus deltoides]      338   1e-90
ref|XP_002302112.1| predicted protein [Populus trichocarpa] gi|2...   337   3e-90
ref|XP_004140097.1| PREDICTED: ribosome-recycling factor, chloro...   321   3e-85
sp|P82231.1|RRFC_SPIOL RecName: Full=Ribosome-recycling factor, ...   320   6e-85
emb|CBI28691.3| unnamed protein product [Vitis vinifera]              315   1e-83

>gb|ABK96574.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 286

 Score =  338 bits (868), Expect = 1e-90
 Identities = 182/273 (66%), Positives = 220/273 (80%), Gaps = 5/273 (1%)
 Frame = -2

Query: 1032 VRSLCQPNS--PKSLLSIRDSYSRGNNSTSCLPIS---KNVSLWSSVSNYVGLQVGASKF 868
            +RS+ QPN   PK+LLS+  S+ RG +       S    +VSLWSS +NY  L+ G+SK 
Sbjct: 14   LRSIFQPNPNPPKALLSLTGSFHRGPHRAKVGYNSIGAASVSLWSSSANYSSLRNGSSKL 73

Query: 867  SKKPIVAKQLVYNRTGVWKCATIEEIEAEKSMIADDAKKRMDKTIETVREHFNAVRTGRA 688
            S KP+  K+L+ NR GV + ATIEEIEAEKS+I DDAK RM+KTI+T+R +FN+VRTGRA
Sbjct: 74   SGKPVAVKRLLQNRRGVVRNATIEEIEAEKSLIEDDAKGRMEKTIDTMRTNFNSVRTGRA 133

Query: 687  SPTMLDRVEVEYYGTPVSLKSLAQISTPDASSLLIQPYDKSSLKSIEKAIVSSDVNLNPN 508
            +P+MLD++EVEYYGTPVSLKS+AQISTPDASSLL+QPYDKSSLK+IEKAIVSSD+ L PN
Sbjct: 134  NPSMLDKIEVEYYGTPVSLKSIAQISTPDASSLLVQPYDKSSLKAIEKAIVSSDLGLTPN 193

Query: 507  NDGEVIRLSIPQLTSDRRKDLSKAVAKQAEEGKVAIRNIRRDAIXXXXXXXXXXXXXEDI 328
            NDGEVIR+SIPQLTS+RRK+LSK VAK AEEGKVA+RNIRRDA+             ED 
Sbjct: 194  NDGEVIRMSIPQLTSERRKELSKMVAKLAEEGKVALRNIRRDALKAYEKLEKEKKLSEDN 253

Query: 327  VKDLSSDLQKMTDEYMKKIDSIYKQKEKELMTV 229
            VKDLSSDLQK+TDEYMKK+D+I+KQKEKEL+ V
Sbjct: 254  VKDLSSDLQKLTDEYMKKLDNIFKQKEKELLKV 286


>ref|XP_002302112.1| predicted protein [Populus trichocarpa] gi|222843838|gb|EEE81385.1|
            predicted protein [Populus trichocarpa]
          Length = 286

 Score =  337 bits (864), Expect = 3e-90
 Identities = 180/273 (65%), Positives = 220/273 (80%), Gaps = 5/273 (1%)
 Frame = -2

Query: 1032 VRSLCQPNS--PKSLLSIRDSYSRGNNSTSCLPIS---KNVSLWSSVSNYVGLQVGASKF 868
            +RS+ QPN   PK+LLS+  S+ RG +       S    +VSLWSS +NY  L+ G++K 
Sbjct: 14   LRSIFQPNPNPPKALLSLTGSFHRGPHRAKVCYNSIGATSVSLWSSSANYSSLRNGSTKL 73

Query: 867  SKKPIVAKQLVYNRTGVWKCATIEEIEAEKSMIADDAKKRMDKTIETVREHFNAVRTGRA 688
            S KP+  K+L+ NR GV + ATIEEIEAEKS+I DDAK RM+KTI+T+R +FN+VRTGRA
Sbjct: 74   SGKPVAVKRLLQNRRGVVRNATIEEIEAEKSLIEDDAKGRMEKTIDTMRANFNSVRTGRA 133

Query: 687  SPTMLDRVEVEYYGTPVSLKSLAQISTPDASSLLIQPYDKSSLKSIEKAIVSSDVNLNPN 508
            +P+MLD++EVEYYGTPVSLKS+AQISTPDASSLL+QPYDKSSLK+IEKAIVSSD+ L PN
Sbjct: 134  NPSMLDKIEVEYYGTPVSLKSIAQISTPDASSLLVQPYDKSSLKAIEKAIVSSDLGLTPN 193

Query: 507  NDGEVIRLSIPQLTSDRRKDLSKAVAKQAEEGKVAIRNIRRDAIXXXXXXXXXXXXXEDI 328
            NDGEVIR+SIPQLTS+RRK+LSK VAK AEEGKVA+RNIRRDA+             ED 
Sbjct: 194  NDGEVIRMSIPQLTSERRKELSKMVAKLAEEGKVALRNIRRDALKAYEKLEKEKKLSEDN 253

Query: 327  VKDLSSDLQKMTDEYMKKIDSIYKQKEKELMTV 229
            VKDLSSDLQK+TDEYMKK+++I+KQKEKEL+ V
Sbjct: 254  VKDLSSDLQKLTDEYMKKLENIFKQKEKELLKV 286


>ref|XP_004140097.1| PREDICTED: ribosome-recycling factor, chloroplastic-like [Cucumis
            sativus]
          Length = 278

 Score =  321 bits (822), Expect = 3e-85
 Identities = 172/272 (63%), Positives = 210/272 (77%)
 Frame = -2

Query: 1044 SAATVRSLCQPNSPKSLLSIRDSYSRGNNSTSCLPISKNVSLWSSVSNYVGLQVGASKFS 865
            +A+  RSL Q   PKSLLS+RD Y+ G N   C  I+ ++  W S SNYV L   A   S
Sbjct: 8    TASIRRSLFQNPPPKSLLSLRD-YNGGLNCVKCGSITAHLCSWKSASNYVRLNRQALVIS 66

Query: 864  KKPIVAKQLVYNRTGVWKCATIEEIEAEKSMIADDAKKRMDKTIETVREHFNAVRTGRAS 685
             +  V+  +  NR  V + ATIEEIEAEK++I  D K RM+KTI+TVR +FN++RTGR++
Sbjct: 67   TQLSVSGNVFKNRRLVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSNFNSIRTGRSN 126

Query: 684  PTMLDRVEVEYYGTPVSLKSLAQISTPDASSLLIQPYDKSSLKSIEKAIVSSDVNLNPNN 505
            P MLD++EVEYYG+PVSLKS+AQISTPDASSLL+QPYDKSSLKSIEKAIV+SD+ + PNN
Sbjct: 127  PAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNN 186

Query: 504  DGEVIRLSIPQLTSDRRKDLSKAVAKQAEEGKVAIRNIRRDAIXXXXXXXXXXXXXEDIV 325
            DGEVIRL++PQLTS+RRK+LSK VAKQAEEGKVA+RNIRRDA+             ED V
Sbjct: 187  DGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNV 246

Query: 324  KDLSSDLQKMTDEYMKKIDSIYKQKEKELMTV 229
            KDLSSDLQK+TD+YMKKID +YKQKEKEL+ V
Sbjct: 247  KDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV 278


>sp|P82231.1|RRFC_SPIOL RecName: Full=Ribosome-recycling factor, chloroplastic; Short=RRF;
            AltName: Full=CpFrr; AltName: Full=RRFHCP; AltName:
            Full=Ribosome-releasing factor, chloroplastic; Flags:
            Precursor gi|4689034|emb|CAB41419.1| chloroplast ribosome
            recycling factor protein [Spinacia oleracea]
          Length = 271

 Score =  320 bits (819), Expect = 6e-85
 Identities = 174/280 (62%), Positives = 211/280 (75%), Gaps = 2/280 (0%)
 Frame = -2

Query: 1062 MAISLYSAAT--VRSLCQPNSPKSLLSIRDSYSRGNNSTSCLPISKNVSLWSSVSNYVGL 889
            MA S  S+AT  + S  + NS  SL  + D          C     NVS+W S +NYV +
Sbjct: 1    MAASSLSSATSYLHSFRRRNSCVSLQGVSDM--------ECNIARTNVSVWRSSANYVRM 52

Query: 888  QVGASKFSKKPIVAKQLVYNRTGVWKCATIEEIEAEKSMIADDAKKRMDKTIETVREHFN 709
              G  KFS K +V KQL  NR G ++CAT+EE+EAEKS+I  + K+RM+KTIET+R +FN
Sbjct: 53   DCGVKKFSGKAVVVKQL-QNRAGTFRCATMEEVEAEKSLIETNTKQRMEKTIETIRSNFN 111

Query: 708  AVRTGRASPTMLDRVEVEYYGTPVSLKSLAQISTPDASSLLIQPYDKSSLKSIEKAIVSS 529
            +VRT RASPTMLDR+EVEYYGTPVSLKS+AQISTPDASSLLI PYDKSSLK+IEKAIV+S
Sbjct: 112  SVRTNRASPTMLDRIEVEYYGTPVSLKSIAQISTPDASSLLISPYDKSSLKAIEKAIVTS 171

Query: 528  DVNLNPNNDGEVIRLSIPQLTSDRRKDLSKAVAKQAEEGKVAIRNIRRDAIXXXXXXXXX 349
             + ++PNNDGEVIRLS+P LTSDRRK+L+K V+K AEEGKVA+RNIRRDA+         
Sbjct: 172  QLGVSPNNDGEVIRLSLPPLTSDRRKELAKVVSKLAEEGKVAVRNIRRDALKSYEKLEKE 231

Query: 348  XXXXEDIVKDLSSDLQKMTDEYMKKIDSIYKQKEKELMTV 229
                ED VKDLS+DLQK+TDEYMKK++SIYKQKE+ELM V
Sbjct: 232  KKLSEDNVKDLSADLQKLTDEYMKKVESIYKQKEQELMKV 271


>emb|CBI28691.3| unnamed protein product [Vitis vinifera]
          Length = 274

 Score =  315 bits (808), Expect = 1e-83
 Identities = 177/279 (63%), Positives = 210/279 (75%), Gaps = 1/279 (0%)
 Frame = -2

Query: 1062 MAISLYSAATVRSLCQPNSPKSLLSIRDSYSRGNNSTSC-LPISKNVSLWSSVSNYVGLQ 886
            MA++   A  VR++ Q  S    LS    Y RG     C L I    +L  S +NYV L 
Sbjct: 1    MAMTFSPATPVRTIFQRKS----LSPGGCYCRGPGYEKCHLNIGIAFTL-RSAANYVRLG 55

Query: 885  VGASKFSKKPIVAKQLVYNRTGVWKCATIEEIEAEKSMIADDAKKRMDKTIETVREHFNA 706
             GA ++S K  VAK+    RTG+++CATIEEIEAEKS I  D K+RM+KTIETVR +FN+
Sbjct: 56   DGAREYSGKLFVAKRNFQKRTGIFRCATIEEIEAEKSSIEKDVKERMEKTIETVRTNFNS 115

Query: 705  VRTGRASPTMLDRVEVEYYGTPVSLKSLAQISTPDASSLLIQPYDKSSLKSIEKAIVSSD 526
            +RTGRA+P +LDRVEVEYYGTPVSLKS+AQISTPD++SLL+QPYDKSSLK IEKAIVSSD
Sbjct: 116  IRTGRANPAILDRVEVEYYGTPVSLKSIAQISTPDSASLLVQPYDKSSLKVIEKAIVSSD 175

Query: 525  VNLNPNNDGEVIRLSIPQLTSDRRKDLSKAVAKQAEEGKVAIRNIRRDAIXXXXXXXXXX 346
            + L PNNDGEVIRLS+PQLTS+RRK+LSK VAKQ EEGKVA+RNIRRDA+          
Sbjct: 176  LGLTPNNDGEVIRLSLPQLTSERRKELSKVVAKQTEEGKVALRNIRRDALKAYEKLEKDK 235

Query: 345  XXXEDIVKDLSSDLQKMTDEYMKKIDSIYKQKEKELMTV 229
               ED VKDLSSDLQK+ DEYMKKI++IYKQKEKEL+ V
Sbjct: 236  KLSEDNVKDLSSDLQKLIDEYMKKIETIYKQKEKELLKV 274