BLASTX nr result

ID: Cimicifuga21_contig00014810 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00014810
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40215.3| unnamed protein product [Vitis vinifera]               63   3e-08
ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containi...    57   2e-06

>emb|CBI40215.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 31/67 (46%), Positives = 40/67 (59%)
 Frame = -1

Query: 201 SSPCRTTGRLLQHLRSFYASSLPSSQNPCNELYLCNKRIQELGRLGEVDQARQLFDEMFH 22
           S+P     R L   R     SLP  + P   L+ CN RIQELGRLG V++AR++F+EM  
Sbjct: 8   STPYPVIRRFLCTFRCISTLSLPIQETPQTHLFQCNTRIQELGRLGRVEEARRVFNEMIQ 67

Query: 21  RDSGTWN 1
           RD  +WN
Sbjct: 68  RDVVSWN 74


>ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
          Length = 1058

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 5/64 (7%)
 Frame = -1

Query: 177 RLLQHLRSF-----YASSLPSSQNPCNELYLCNKRIQELGRLGEVDQARQLFDEMFHRDS 13
           R + +L+ F     + S   + + P   L+ CN RIQELGRLG V++AR++F+EM  RD 
Sbjct: 143 RWMDYLQQFKFVIRHKSGAKNKETPQTHLFQCNTRIQELGRLGRVEEARRVFNEMIQRDV 202

Query: 12  GTWN 1
            +WN
Sbjct: 203 VSWN 206


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