BLASTX nr result

ID: Cimicifuga21_contig00014785 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00014785
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526570.1| brca1 associated ring domain, putative [Rici...    92   4e-17
ref|XP_003520608.1| PREDICTED: protein BREAST CANCER SUSCEPTIBIL...    87   2e-15
ref|XP_003541671.1| PREDICTED: protein BREAST CANCER SUSCEPTIBIL...    82   5e-14
gb|AAD10669.1| Hypothetical protein [Arabidopsis thaliana]             79   5e-13
ref|NP_171898.2| BRCA1-associated RING domain protein 1 [Arabido...    79   5e-13

>ref|XP_002526570.1| brca1 associated ring domain, putative [Ricinus communis]
           gi|223534131|gb|EEF35848.1| brca1 associated ring
           domain, putative [Ricinus communis]
          Length = 744

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 56/119 (47%), Positives = 73/119 (61%), Gaps = 3/119 (2%)
 Frame = -1

Query: 357 GRLRIMRKAPKLFDGLNFYFCGYFE--HKCDLEELVKAAGGTI-STKDVTSKRRNAEAEC 187
           GRL ++  APKLF GLNFYF G F   +K DL+ LV AAGGTI  +K+   ++ + EA  
Sbjct: 611 GRLSVLDNAPKLFSGLNFYFAGDFVSGYKEDLQNLVLAAGGTILDSKEKVVEQSHNEATP 670

Query: 186 STSLVVYSLDFSSECKPKDRDLVRKLRHEEAEELAFRTQSWVVHHLWILEPIASMKSQP 10
           S +LVVY+ D    CK  +   +   R  EAE+LA +  S V+ H W+LE IAS K QP
Sbjct: 671 SRTLVVYNFDPPLGCKLGEEVTILWQRLSEAEDLAAKIGSQVIAHTWLLESIASYKFQP 729


>ref|XP_003520608.1| PREDICTED: protein BREAST CANCER SUSCEPTIBILITY 1 homolog [Glycine
           max]
          Length = 678

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 51/120 (42%), Positives = 72/120 (60%), Gaps = 4/120 (3%)
 Frame = -1

Query: 357 GRLRIMRKAPKLFDGLNFYFCGYF--EHKCDLEELVKAAGGTI--STKDVTSKRRNAEAE 190
           GRLR +   PKLF+GL FYF G +   +K DLEEL++  GGT+  S +++ S+R   + +
Sbjct: 557 GRLRALANEPKLFNGLKFYFSGDYVSTYKEDLEELIEVGGGTVLRSKEELESQRHECKGD 616

Query: 189 CSTSLVVYSLDFSSECKPKDRDLVRKLRHEEAEELAFRTQSWVVHHLWILEPIASMKSQP 10
            S  L+VY+LD    CK  +   +   R  +AE+LA  T   V+ H WILE IA+ K QP
Sbjct: 617 SSQLLIVYNLDPPQGCKLGEEVSILWQRLNDAEDLAANTLQ-VIGHTWILESIAACKLQP 675


>ref|XP_003541671.1| PREDICTED: protein BREAST CANCER SUSCEPTIBILITY 1 homolog [Glycine
            max]
          Length = 979

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 49/120 (40%), Positives = 68/120 (56%), Gaps = 5/120 (4%)
 Frame = -1

Query: 357  GRLRIMRKAPKLFDGLNFYFCGYF--EHKCDLEELVKAAGGTI-STKDVTSKRRNAEAEC 187
            GRLR++ K PKLF G  FYF G F   +K  L+ LV AAGG I   K V+  + +   + 
Sbjct: 856  GRLRVLNKQPKLFYGYKFYFMGDFIPSYKGYLQNLVVAAGGIILHRKPVSGDQESTSPDM 915

Query: 186  ST--SLVVYSLDFSSECKPKDRDLVRKLRHEEAEELAFRTQSWVVHHLWILEPIASMKSQ 13
             T  +L++YSL+   +CKP  +D +   R  +AE LA  T S V  + W+L  IA+ K Q
Sbjct: 916  HTYQTLIIYSLELPDKCKPSKKDTICSQRRHDAEVLASSTGSNVASNTWVLNSIAACKLQ 975


>gb|AAD10669.1| Hypothetical protein [Arabidopsis thaliana]
          Length = 727

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 51/120 (42%), Positives = 67/120 (55%), Gaps = 5/120 (4%)
 Frame = -1

Query: 354 RLRIMRKAPKLFDGLNFYFCG--YFEHKCDLEELVKAAGGTI-STKDV--TSKRRNAEAE 190
           RLR     PKLF+GL FYF G  Y  +K DL+ LVK AGGTI +T+D        N   +
Sbjct: 605 RLRAETNKPKLFEGLKFYFFGDFYKGYKEDLQNLVKVAGGTILNTEDELGAESSNNVNDQ 664

Query: 189 CSTSLVVYSLDFSSECKPKDRDLVRKLRHEEAEELAFRTQSWVVHHLWILEPIASMKSQP 10
            S+S+VVY++D    C   +   +   R  +AE LA +T S +V H W+LE IA  K  P
Sbjct: 665 RSSSIVVYNIDPPHGCALGEEVTIIWQRANDAEALASQTGSRLVGHTWVLESIAGYKLHP 724


>ref|NP_171898.2| BRCA1-associated RING domain protein 1 [Arabidopsis thaliana]
           gi|332189526|gb|AEE27647.1| BRCA1-associated RING domain
           protein 1 [Arabidopsis thaliana]
          Length = 714

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 51/120 (42%), Positives = 67/120 (55%), Gaps = 5/120 (4%)
 Frame = -1

Query: 354 RLRIMRKAPKLFDGLNFYFCG--YFEHKCDLEELVKAAGGTI-STKDV--TSKRRNAEAE 190
           RLR     PKLF+GL FYF G  Y  +K DL+ LVK AGGTI +T+D        N   +
Sbjct: 592 RLRAETNKPKLFEGLKFYFFGDFYKGYKEDLQNLVKVAGGTILNTEDELGAESSNNVNDQ 651

Query: 189 CSTSLVVYSLDFSSECKPKDRDLVRKLRHEEAEELAFRTQSWVVHHLWILEPIASMKSQP 10
            S+S+VVY++D    C   +   +   R  +AE LA +T S +V H W+LE IA  K  P
Sbjct: 652 RSSSIVVYNIDPPHGCALGEEVTIIWQRANDAEALASQTGSRLVGHTWVLESIAGYKLHP 711


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