BLASTX nr result

ID: Cimicifuga21_contig00014769 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00014769
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266168.2| PREDICTED: uncharacterized protein LOC100266...   189   3e-46
emb|CBI33596.3| unnamed protein product [Vitis vinifera]              189   3e-46
ref|XP_003551833.1| PREDICTED: uncharacterized protein LOC100807...   159   2e-37
tpg|DAA58079.1| TPA: putative DNA ligase family protein, partial...   150   8e-35
ref|XP_002887071.1| ATP dependent DNA ligase family protein [Ara...   149   2e-34

>ref|XP_002266168.2| PREDICTED: uncharacterized protein LOC100266816 [Vitis vinifera]
          Length = 1449

 Score =  189 bits (479), Expect = 3e-46
 Identities = 85/119 (71%), Positives = 101/119 (84%)
 Frame = -1

Query: 359 KVIPKTRFIVDGFRYSGNYSVSYFLSHFHSDHYVGLTPNWSKGLIFCSQITAQLLTEVLK 180
           K+IPK+RF+VDGFR SG+YSV+YFLSHFHSDHY GL+P WS G+IFCS  TA+LL EVL 
Sbjct: 93  KLIPKSRFVVDGFRCSGDYSVTYFLSHFHSDHYSGLSPKWSNGIIFCSNTTARLLVEVLG 152

Query: 179 VSPLFVVSLSLRQTICIDECEVTLVDANHCPGAVQFLFKIPGFDGKDKKYVHTGDFRFC 3
           VS LFV  L++ Q + ID CEV L+DANHCPGAVQFLFK+PG DG+ ++YVHTGDFRFC
Sbjct: 153 VSSLFVYPLAVSQPVLIDGCEVALLDANHCPGAVQFLFKVPGVDGRFERYVHTGDFRFC 211


>emb|CBI33596.3| unnamed protein product [Vitis vinifera]
          Length = 1390

 Score =  189 bits (479), Expect = 3e-46
 Identities = 85/119 (71%), Positives = 101/119 (84%)
 Frame = -1

Query: 359 KVIPKTRFIVDGFRYSGNYSVSYFLSHFHSDHYVGLTPNWSKGLIFCSQITAQLLTEVLK 180
           K+IPK+RF+VDGFR SG+YSV+YFLSHFHSDHY GL+P WS G+IFCS  TA+LL EVL 
Sbjct: 50  KLIPKSRFVVDGFRCSGDYSVTYFLSHFHSDHYSGLSPKWSNGIIFCSNTTARLLVEVLG 109

Query: 179 VSPLFVVSLSLRQTICIDECEVTLVDANHCPGAVQFLFKIPGFDGKDKKYVHTGDFRFC 3
           VS LFV  L++ Q + ID CEV L+DANHCPGAVQFLFK+PG DG+ ++YVHTGDFRFC
Sbjct: 110 VSSLFVYPLAVSQPVLIDGCEVALLDANHCPGAVQFLFKVPGVDGRFERYVHTGDFRFC 168


>ref|XP_003551833.1| PREDICTED: uncharacterized protein LOC100807673 [Glycine max]
          Length = 1402

 Score =  159 bits (403), Expect = 2e-37
 Identities = 75/121 (61%), Positives = 91/121 (75%), Gaps = 2/121 (1%)
 Frame = -1

Query: 359 KVIPKTRFIVDGFRYSGNYSVSYFLSHFHSDHYVGLTPNWSKGLIFCSQITAQLLTEVLK 180
           K+IP TRF+VD FR++G +S SYFLSHFHSDHY GL+P+WS+G+IFCS  TA LL  +L 
Sbjct: 40  KLIPHTRFLVDAFRHAGPHSHSYFLSHFHSDHYSGLSPSWSRGVIFCSHTTAALLRRILH 99

Query: 179 VSPLFVVSLSLRQTICIDECEVTLVDANHCPGAVQFLFKIP--GFDGKDKKYVHTGDFRF 6
           +   F+V L LRQ + ID   VTL+DANHCPGAVQFLF +P    D    +YVHTGDFRF
Sbjct: 100 IPAAFIVPLPLRQPLRIDGAHVTLLDANHCPGAVQFLFSVPRATADAAALRYVHTGDFRF 159

Query: 5   C 3
           C
Sbjct: 160 C 160


>tpg|DAA58079.1| TPA: putative DNA ligase family protein, partial [Zea mays]
          Length = 885

 Score =  150 bits (380), Expect = 8e-35
 Identities = 71/117 (60%), Positives = 90/117 (76%)
 Frame = -1

Query: 356 VIPKTRFIVDGFRYSGNYSVSYFLSHFHSDHYVGLTPNWSKGLIFCSQITAQLLTEVLKV 177
           +IP +RF+VD FR++GN+SV+YFLSHFHSDHY GL P+W +GL+FCS  TA+L++ VL V
Sbjct: 57  LIPGSRFLVDAFRHAGNFSVAYFLSHFHSDHYSGLGPSWRRGLVFCSAPTARLVSSVLSV 116

Query: 176 SPLFVVSLSLRQTICIDECEVTLVDANHCPGAVQFLFKIPGFDGKDKKYVHTGDFRF 6
            P  VVSL +   I +D   VT VDANHCPGAVQFLF  PG   + ++YVHTGDFR+
Sbjct: 117 PPQLVVSLDIGVRITVDGWGVTAVDANHCPGAVQFLFASPG--PRAERYVHTGDFRY 171


>ref|XP_002887071.1| ATP dependent DNA ligase family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297332912|gb|EFH63330.1| ATP dependent DNA
           ligase family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1413

 Score =  149 bits (376), Expect = 2e-34
 Identities = 72/121 (59%), Positives = 91/121 (75%), Gaps = 2/121 (1%)
 Frame = -1

Query: 359 KVIPKTRFIVDGFRYS--GNYSVSYFLSHFHSDHYVGLTPNWSKGLIFCSQITAQLLTEV 186
           K IPKT FIVD FR+    + SV++FLSHFHSDHY GL+  WSKG+IFCS  TA+L+ E+
Sbjct: 58  KRIPKTNFIVDLFRFPQHSSTSVAFFLSHFHSDHYSGLSSTWSKGIIFCSHKTARLVEEI 117

Query: 185 LKVSPLFVVSLSLRQTICIDECEVTLVDANHCPGAVQFLFKIPGFDGKDKKYVHTGDFRF 6
           L+V   FV +L + Q + ID  EV L++ANHCPGAVQFLFK+   +G  ++YVHTGDFRF
Sbjct: 118 LQVPSQFVFALPMNQMVMIDGSEVVLIEANHCPGAVQFLFKVKLENGGFERYVHTGDFRF 177

Query: 5   C 3
           C
Sbjct: 178 C 178


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