BLASTX nr result

ID: Cimicifuga21_contig00014741 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00014741
         (654 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67410.1| hypothetical protein VITISV_025621 [Vitis vinifera]   133   3e-29
ref|XP_002322799.1| predicted protein [Populus trichocarpa] gi|2...   115   7e-24
ref|XP_002530155.1| conserved hypothetical protein [Ricinus comm...    93   4e-17
ref|XP_003553616.1| PREDICTED: uncharacterized protein LOC100786...    87   4e-15
ref|XP_003520710.1| PREDICTED: uncharacterized protein LOC100804...    79   1e-12

>emb|CAN67410.1| hypothetical protein VITISV_025621 [Vitis vinifera]
          Length = 735

 Score =  133 bits (335), Expect = 3e-29
 Identities = 88/177 (49%), Positives = 102/177 (57%), Gaps = 19/177 (10%)
 Frame = +2

Query: 167  SEPIPSS-LRRRNSMDSPILPKDIHIPNK-------------RQSSSFGDKSP---FPTL 295
            S P PSS LRRRNS+ +  +P  + +P+K             R SSS    SP   FP +
Sbjct: 560  SHPPPSSNLRRRNSIGTAAIPTKLTLPSKAHYSSSFPRPNGVRVSSSTSSSSPQSSFPNV 619

Query: 296  DLELISLKSLETYTSLKDILPSLSAVQSPTACA--SPSIYEIPIRNHLVKQAAWAYLQXX 469
            D ELISLKSL  YTSLKD+LPS SA QSPTA    S S YEI IRN LVKQAAWAYLQ  
Sbjct: 620  DFELISLKSL-AYTSLKDLLPSTSAAQSPTAAGTGSGSCYEISIRNRLVKQAAWAYLQPM 678

Query: 470  XXXXXXXXXXXFRRMWSRFSIDYLRNPVNSCFQFICRHVIPTITRVFDQFLGAIRVR 640
                       F RM   FS++ LRN V++C  FI RH+   I R FD+ L  I VR
Sbjct: 679  SASPGSSGGRLFDRMLLGFSMECLRNRVSTCLGFINRHIFSAIIRAFDRILRMIGVR 735


>ref|XP_002322799.1| predicted protein [Populus trichocarpa] gi|222867429|gb|EEF04560.1|
           predicted protein [Populus trichocarpa]
          Length = 165

 Score =  115 bits (288), Expect = 7e-24
 Identities = 72/161 (44%), Positives = 93/161 (57%), Gaps = 3/161 (1%)
 Frame = +2

Query: 173 PIPSSLRRRNSM-DSPILPKDIHIPNKRQSSSFGDKSPFPTLDLELISLKSLETYTSLKD 349
           P   +LRRRNS+  S ++P  + +       S  + +    LD+ L+ LKS  +YTS+KD
Sbjct: 8   PRTPTLRRRNSIATSFVIPTKLSLHTSSLPPSHLNGTLPSHLDISLLPLKSSLSYTSIKD 67

Query: 350 ILPSLSAVQSPTACAS--PSIYEIPIRNHLVKQAAWAYLQXXXXXXXXXXXXXFRRMWSR 523
           +LPS + V SPT+  S   S YEIPIRN LVKQAAWAYLQ              RR+W R
Sbjct: 68  LLPS-ATVNSPTSATSNTTSTYEIPIRNRLVKQAAWAYLQPMSSSPDSSGTHFLRRLWLR 126

Query: 524 FSIDYLRNPVNSCFQFICRHVIPTITRVFDQFLGAIRVRIN 646
            S    +NP+ +CF FI   VIP+IT  FD+ L AIRV  N
Sbjct: 127 LS---TKNPITACFGFISFRVIPSITNAFDRILRAIRVHFN 164


>ref|XP_002530155.1| conserved hypothetical protein [Ricinus communis]
           gi|223530316|gb|EEF32210.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 181

 Score = 93.2 bits (230), Expect = 4e-17
 Identities = 71/188 (37%), Positives = 98/188 (52%), Gaps = 20/188 (10%)
 Frame = +2

Query: 143 PPLMVTMNSEPIPSSLRRRNSMDSPI-LPKDIHIPNKRQSSSF--------------GDK 277
           P  +   +S P P SLRRRNS+ + + +P  + +P++   +S               G  
Sbjct: 5   PDSLSPPSSPPSPPSLRRRNSISTSVFIPAKLTLPSQPFHTSSLPPQSTTNGTINCNGSG 64

Query: 278 SPFPTLDLELISLKSLE-TYTSLKDILPSLSAVQSPT-ACASP---SIYEIPIRNHLVKQ 442
           +    +  EL S KS   +YTSLKDILPS +AV SPT A A+P   S YEI IRNHLVKQ
Sbjct: 65  NGNDVVAFELASFKSSSLSYTSLKDILPS-TAVNSPTPAAATPTCGSAYEISIRNHLVKQ 123

Query: 443 AAWAYLQXXXXXXXXXXXXXFRRMWSRFSIDYLRNPVNSCFQFICRHVIPTITRVFDQFL 622
           AAWAYLQ              +R+W +FS      P+ +C +F        IT VFD+ +
Sbjct: 124 AAWAYLQPMSSSPDSSSQHFLQRLWLKFS---TAGPITACIRF--------ITLVFDRII 172

Query: 623 GAIRVRIN 646
             I +++N
Sbjct: 173 CLICIQMN 180


>ref|XP_003553616.1| PREDICTED: uncharacterized protein LOC100786476 [Glycine max]
          Length = 155

 Score = 86.7 bits (213), Expect = 4e-15
 Identities = 67/163 (41%), Positives = 83/163 (50%), Gaps = 6/163 (3%)
 Frame = +2

Query: 173 PIPSS---LRRRNSMDSPILPKDIHIPNKRQSSSFGDKSPFPTLDLELISLKS--LETYT 337
           P PS    LRR NS+ +P +PK + +P            P  T   EL+SLKS    +YT
Sbjct: 10  PAPSESPPLRRHNSIAAPSVPK-LFLPAT---------PPQRTTSFELVSLKSPFSASYT 59

Query: 338 SLKDILPS-LSAVQSPTACASPSIYEIPIRNHLVKQAAWAYLQXXXXXXXXXXXXXFRRM 514
           SL+D+LPS  +AV SPTA A  S  EI IRN LVKQAAWAYLQ             F R 
Sbjct: 60  SLRDVLPSPYAAVNSPTASAY-SGQEISIRNRLVKQAAWAYLQPMSASPGGASTPHFLRR 118

Query: 515 WSRFSIDYLRNPVNSCFQFICRHVIPTITRVFDQFLGAIRVRI 643
            S            +C  F   H IP ++RVF + L A+RV +
Sbjct: 119 LSA-----------TCLGFFYHHFIPVVSRVFSRMLHALRVHV 150


>ref|XP_003520710.1| PREDICTED: uncharacterized protein LOC100804851 [Glycine max]
          Length = 156

 Score = 78.6 bits (192), Expect = 1e-12
 Identities = 64/171 (37%), Positives = 78/171 (45%), Gaps = 6/171 (3%)
 Frame = +2

Query: 158 TMNSEPIPSSLRRRNSMDSPILPKDIHIPNKRQSSSFGDKSPFPTLDLELISLKS--LET 331
           T ++ P    L R NS+  P  PK           S     P  T   EL+SL S    +
Sbjct: 8   TTHAPPESPPLHRHNSITGPSAPK----------LSLPATPPQRTSSFELVSLMSPFSAS 57

Query: 332 YTSLKDILPS-LSAVQSPTACASPSIY---EIPIRNHLVKQAAWAYLQXXXXXXXXXXXX 499
           YTSL+D+LPS  +AV SPTA    S+Y   EI IRN LVKQAAWAYLQ            
Sbjct: 58  YTSLRDMLPSPYAAVNSPTA----SVYSGQEISIRNRLVKQAAWAYLQPMSASQGGASTP 113

Query: 500 XFRRMWSRFSIDYLRNPVNSCFQFICRHVIPTITRVFDQFLGAIRVRINMR 652
            F R  S            +C  F   H  P +TR F + L A+RV +  R
Sbjct: 114 NFLRRLSA-----------ACLGFFYHHFFPAVTRFFRRMLHALRVHVFTR 153


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