BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00014727
         (590 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513467.1| ubiquitin-protein ligase, putative [Ricinus ...    74   1e-11
emb|CAN81149.1| hypothetical protein VITISV_020815 [Vitis vinifera]    70   3e-10
emb|CBI26021.3| unnamed protein product [Vitis vinifera]               67   2e-09
ref|XP_002511355.1| ubiquitin-protein ligase, putative [Ricinus ...    62   6e-08
ref|XP_002453394.1| hypothetical protein SORBIDRAFT_04g005220 [S...    60   4e-07

>ref|XP_002513467.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223547375|gb|EEF48870.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 464

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 49/158 (31%), Positives = 74/158 (46%), Gaps = 3/158 (1%)
 Frame = +3

Query: 3   RTSILSQRWRYLWKTSVA---FSSSLNLDVLAMRGGDYTHNMFSILVRGSRGFEFMDDNR 173
           RTSILS RWR+LW        F +SL +  L +  G  + +M                  
Sbjct: 57  RTSILSTRWRHLWTYYTGIMDFDASLTMWYLQLGLGSKSLDM------------------ 98

Query: 174 LLLIERNKFIEWVNLILQLDYSPMIDSFRLRFYFKKDFAHLIDQWVNVAIAKRLPNIDID 353
               ER+ F+ WVN +L+    P ++  R+ F    DF + ID W+ +A+ KR+  ++ID
Sbjct: 99  ----ERHSFVSWVNQVLRSHEGPTMEGLRICFDLDSDFMYEIDSWITIAMQKRVKRLEID 154

Query: 354 LSHFLPSGNLDPNEELYVFPSKLFTQETGLLVKRLCLN 467
           L++  PS     +   Y FPS L    +   +K L LN
Sbjct: 155 LTNIEPSIKTTGS---YAFPSGLLNDSSFSSLKTLQLN 189


>emb|CAN81149.1| hypothetical protein VITISV_020815 [Vitis vinifera]
          Length = 1789

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 64/209 (30%), Positives = 101/209 (48%), Gaps = 13/209 (6%)
 Frame = +3

Query: 3    RTSILSQRWRYLWKTSVAFSSSLNLDVLAMRG-GDYTHNMFSILVRGSRGFEFMDDNRLL 179
            RT ILS+RWR +W       S L  D  ++ G GD + +M                N+  
Sbjct: 1342 RTGILSKRWRSIWTCH----SELWFDAASVLGIGDCSXSM--------------SGNQPE 1383

Query: 180  L---IERNKFIEWVNLILQL-DYSPMIDSFRLRFYFKKDFAHLIDQWVNVAIAKRLPNID 347
            L   ++  KF+E V+  +      P I+SF + F   K+F   IDQW+  A+ K + NID
Sbjct: 1384 LNSQMQSXKFVERVDQFMYYRSQGPKINSFSIHFPLGKEFMSHIDQWITCAVMKGVENID 1443

Query: 348  IDLSHFLPSGNLDPNE------ELYVFPSKLFTQETG-LLVKRLCLNSCVLGPL-DFNCF 503
            +DLS +  S NL  ++      ++Y FP +LF+   G   +K L L SC L  L   N  
Sbjct: 1444 LDLSEYF-SFNLKRDDTSSTAFQIYEFPCRLFSVPGGRCTLKHLRLASCHLSALPSSNTL 1502

Query: 504  RSIVDLQLVHVLINKKLPKISLFIRTCTN 590
             S++ + L  V I+ +  ++   + TC++
Sbjct: 1503 TSLITVDLQRVNISDQ--QLQDLLSTCSH 1529


>emb|CBI26021.3| unnamed protein product [Vitis vinifera]
          Length = 487

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 63/209 (30%), Positives = 101/209 (48%), Gaps = 13/209 (6%)
 Frame = +3

Query: 3   RTSILSQRWRYLWKTSVAFSSSLNLDVLAMRG-GDYTHNMFSILVRGSRGFEFMDDNRLL 179
           RT ILS+RWR +W       S L  D  ++ G GD + +M                N+  
Sbjct: 40  RTGILSKRWRSIWTCH----SELWFDAASVLGIGDCSTSM--------------SGNQPE 81

Query: 180 L---IERNKFIEWVNLILQL-DYSPMIDSFRLRFYFKKDFAHLIDQWVNVAIAKRLPNID 347
           L   ++ +KF+E V+  +        I+SF + F   K+F   IDQW+  A+ K + NID
Sbjct: 82  LNSQMQSSKFVERVDQFMYYRSQGRKINSFSIHFPLGKEFMSHIDQWITCAVMKGVENID 141

Query: 348 IDLSHFLPSGNLDPNE------ELYVFPSKLFTQETG-LLVKRLCLNSCVLGPL-DFNCF 503
           +DLS +  S NL  ++      ++Y FP +LF+   G   +K L L SC L  L   N  
Sbjct: 142 LDLSEYF-SFNLKRDDTSSTAFQIYEFPCRLFSVPGGRCTLKHLRLASCHLSALPSSNTL 200

Query: 504 RSIVDLQLVHVLINKKLPKISLFIRTCTN 590
            S++ + L  V I+ +  ++   + TC++
Sbjct: 201 TSLITVDLQRVNISDQ--QLQDLLSTCSH 227


>ref|XP_002511355.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223550470|gb|EEF51957.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 457

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 42/137 (30%), Positives = 65/137 (47%)
 Frame = +3

Query: 3   RTSILSQRWRYLWKTSVAFSSSLNLDVLAMRGGDYTHNMFSILVRGSRGFEFMDDNRLLL 182
           RTS+LS+RWR LW      +SSLN D   +  G                 + +DD   L 
Sbjct: 43  RTSVLSRRWRILW----TLTSSLNFDCTKIALG-----------------KKLDDRFALR 81

Query: 183 IERNKFIEWVNLILQLDYSPMIDSFRLRFYFKKDFAHLIDQWVNVAIAKRLPNIDIDLSH 362
            ER +F  WV  +L++     +D F + F    +    +D+W+N A++K L  ++I L+ 
Sbjct: 82  SERTRFAMWVKRVLEVYKDSNLDEFIVSFDLTCNSRRSLDKWMNFAMSKTLKRLEISLAP 141

Query: 363 FLPSGNLDPNEELYVFP 413
           F  S     ++E Y FP
Sbjct: 142 F-SSRKFRFHDECYSFP 157


>ref|XP_002453394.1| hypothetical protein SORBIDRAFT_04g005220 [Sorghum bicolor]
           gi|241933225|gb|EES06370.1| hypothetical protein
           SORBIDRAFT_04g005220 [Sorghum bicolor]
          Length = 494

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 57/203 (28%), Positives = 94/203 (46%), Gaps = 9/203 (4%)
 Frame = +3

Query: 3   RTSILSQRWRYLWKTSVAFSSSLNLDVLAMRGGDYTHNMFSILVRGSRGFEFMDDNRLLL 182
           RTS+LS++ +++W++     ++LN D   MR G +         R S+G+          
Sbjct: 21  RTSVLSRKLKHVWRSH----TNLNFDTGTMRKGYF---------RPSKGYYSG------- 60

Query: 183 IERNKFIEWVNLILQLDYSPMIDSFRLRFYFKKDFAHLIDQWVNVAIAKRLPNIDIDLS- 359
           ++ N+F+  V+ ++Q      ++  ++RF      A  ID WV+VAIA +     I+LS 
Sbjct: 61  LKDNEFVTRVDTVVQQHNGTGVEHMKIRFRLHSKHADHIDSWVSVAIASKTKEFVINLSG 120

Query: 360 -----HFLPSGNLD--PNEELYVFPSKLFTQETGLLVKRLCLNSCVLG-PLDFNCFRSIV 515
                 FL  G +     EE Y FPS+ F+      ++ L L S  L  P DF    ++ 
Sbjct: 121 GSRGIFFLRGGRIRRMVGEEPYSFPSQFFSPNNCSHLRCLELWSVSLQLPSDFKGCLNLK 180

Query: 516 DLQLVHVLINKKLPKISLFIRTC 584
            L LV V I  +   +   + TC
Sbjct: 181 SLTLVDVSITDE--DVQCILSTC 201