BLASTX nr result

ID: Cimicifuga21_contig00014713 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00014713
         (1255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267766.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   231   3e-59
emb|CBI32069.3| unnamed protein product [Vitis vinifera]              231   3e-59
ref|XP_002327255.1| predicted protein [Populus trichocarpa] gi|2...   226   7e-57
ref|XP_002268478.1| PREDICTED: probable ribonuclease P/MRP prote...   226   9e-57
ref|XP_002321344.1| predicted protein [Populus trichocarpa] gi|2...   225   2e-56

>ref|XP_002267766.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2,
            chloroplastic-like [Vitis vinifera]
          Length = 1174

 Score =  231 bits (590), Expect(2) = 3e-59
 Identities = 116/145 (80%), Positives = 129/145 (88%), Gaps = 1/145 (0%)
 Frame = -1

Query: 1252 RKRESEQSYNSVANMSGQSPLSKNDVNTIRRSQVPQVRDTLRQLKARDMLPAIWFIFSRK 1073
            +KRES+ SY+S A++ GQS LSKND+NTIRRSQVPQV DTL  LKARDMLPAIWFIFSRK
Sbjct: 391  KKRESDMSYSSFASIHGQSSLSKNDINTIRRSQVPQVMDTLWHLKARDMLPAIWFIFSRK 450

Query: 1072 GCDAAVQYV-DGNLLDEFEMVEVQLALKRFRIQYPDAVREAGVKDLLQGVAAHHAGCLPL 896
            GCDA+VQY+ D NLLDE EM EV LALKRFR+QYPDAVRE+ VK LLQGVAAHHAGCLPL
Sbjct: 451  GCDASVQYLEDCNLLDESEMSEVDLALKRFRLQYPDAVRESAVKGLLQGVAAHHAGCLPL 510

Query: 895  WKSFIEQLFQKGLVKIVFATETFTA 821
            WKSFIE+LFQ+GLVK+VFATET  A
Sbjct: 511  WKSFIEELFQRGLVKVVFATETLAA 535



 Score = 24.6 bits (52), Expect(2) = 3e-59
 Identities = 11/15 (73%), Positives = 14/15 (93%)
 Frame = -2

Query: 819 ARTAVITTLSKRSET 775
           ARTAVI++LSKR E+
Sbjct: 541 ARTAVISSLSKRGES 555


>emb|CBI32069.3| unnamed protein product [Vitis vinifera]
          Length = 1064

 Score =  231 bits (590), Expect(2) = 3e-59
 Identities = 116/145 (80%), Positives = 129/145 (88%), Gaps = 1/145 (0%)
 Frame = -1

Query: 1252 RKRESEQSYNSVANMSGQSPLSKNDVNTIRRSQVPQVRDTLRQLKARDMLPAIWFIFSRK 1073
            +KRES+ SY+S A++ GQS LSKND+NTIRRSQVPQV DTL  LKARDMLPAIWFIFSRK
Sbjct: 281  KKRESDMSYSSFASIHGQSSLSKNDINTIRRSQVPQVMDTLWHLKARDMLPAIWFIFSRK 340

Query: 1072 GCDAAVQYV-DGNLLDEFEMVEVQLALKRFRIQYPDAVREAGVKDLLQGVAAHHAGCLPL 896
            GCDA+VQY+ D NLLDE EM EV LALKRFR+QYPDAVRE+ VK LLQGVAAHHAGCLPL
Sbjct: 341  GCDASVQYLEDCNLLDESEMSEVDLALKRFRLQYPDAVRESAVKGLLQGVAAHHAGCLPL 400

Query: 895  WKSFIEQLFQKGLVKIVFATETFTA 821
            WKSFIE+LFQ+GLVK+VFATET  A
Sbjct: 401  WKSFIEELFQRGLVKVVFATETLAA 425



 Score = 24.6 bits (52), Expect(2) = 3e-59
 Identities = 11/15 (73%), Positives = 14/15 (93%)
 Frame = -2

Query: 819 ARTAVITTLSKRSET 775
           ARTAVI++LSKR E+
Sbjct: 431 ARTAVISSLSKRGES 445


>ref|XP_002327255.1| predicted protein [Populus trichocarpa] gi|222835625|gb|EEE74060.1|
           predicted protein [Populus trichocarpa]
          Length = 154

 Score =  226 bits (577), Expect = 7e-57
 Identities = 109/152 (71%), Positives = 126/152 (82%)
 Frame = +3

Query: 192 MVRFRNRYLVMEVFVDPNKDLAKDDPIIITTYNVSKAIKDSVLTNFGECGSAAIVGSFQV 371
           MV F+NRY+VMEVF+DPN+DL  DDPIIIT YNVSKAIKDS+L NFGECG A+ +GSFQV
Sbjct: 1   MVGFKNRYMVMEVFLDPNRDLGVDDPIIITQYNVSKAIKDSILVNFGECGLASSLGSFQV 60

Query: 372 LYVNSITKLCIIRVSREEHEKLWSATTLVRSIGNCPVMFNLLDLSGSSRTCKVAALKCDE 551
            YVN ITKLCIIR SREE++K+WSA T+VR IGNCPV+FNLLDLSGS + CKVAALKCDE
Sbjct: 61  KYVNPITKLCIIRTSREEYQKVWSAITMVRRIGNCPVLFNLLDLSGSIKACKVAALKCDE 120

Query: 552 AKFEQYKQSIGDKLTPETTQKMLNSLEKIKVL 647
            KFE YK + G  L+P+  Q M N LEKI +L
Sbjct: 121 MKFEHYKLAAGAPLSPDVNQHMQNCLEKINIL 152


>ref|XP_002268478.1| PREDICTED: probable ribonuclease P/MRP protein subunit POP5 [Vitis
           vinifera] gi|302144009|emb|CBI23114.3| unnamed protein
           product [Vitis vinifera]
          Length = 154

 Score =  226 bits (576), Expect = 9e-57
 Identities = 107/152 (70%), Positives = 130/152 (85%)
 Frame = +3

Query: 192 MVRFRNRYLVMEVFVDPNKDLAKDDPIIITTYNVSKAIKDSVLTNFGECGSAAIVGSFQV 371
           MV F+NRY++MEVF+DPN+DLA DDPIIIT +NVSKAIKDS+L NFGECG A+  GSFQV
Sbjct: 1   MVGFKNRYMIMEVFLDPNRDLAVDDPIIITQFNVSKAIKDSILVNFGECGLASSFGSFQV 60

Query: 372 LYVNSITKLCIIRVSREEHEKLWSATTLVRSIGNCPVMFNLLDLSGSSRTCKVAALKCDE 551
            YVN ITKLCIIR SREE++K+WSA T+V+SIG+CPV+FNLLDLSGS R C+ AALKCD+
Sbjct: 61  KYVNPITKLCIIRASREEYQKVWSAITMVKSIGHCPVLFNLLDLSGSIRACRNAALKCDK 120

Query: 552 AKFEQYKQSIGDKLTPETTQKMLNSLEKIKVL 647
           AKFEQYK  +GD+LT +   +M N LE+IK+L
Sbjct: 121 AKFEQYKLVVGDRLTDDINNQMQNCLERIKIL 152


>ref|XP_002321344.1| predicted protein [Populus trichocarpa] gi|222868340|gb|EEF05471.1|
           predicted protein [Populus trichocarpa]
          Length = 154

 Score =  225 bits (574), Expect = 2e-56
 Identities = 109/152 (71%), Positives = 126/152 (82%)
 Frame = +3

Query: 192 MVRFRNRYLVMEVFVDPNKDLAKDDPIIITTYNVSKAIKDSVLTNFGECGSAAIVGSFQV 371
           MV F+NRY+VMEVF+DPN+DL  DDPIIIT YNVSKAIKDS+L NFGECG A+ +GSFQV
Sbjct: 1   MVGFKNRYMVMEVFLDPNRDLGVDDPIIITQYNVSKAIKDSILVNFGECGLASSLGSFQV 60

Query: 372 LYVNSITKLCIIRVSREEHEKLWSATTLVRSIGNCPVMFNLLDLSGSSRTCKVAALKCDE 551
            YVN ITKLCIIR SREE++K+WSA T+VR IGNCPV+FNLLDLSGS + CKVAALKCDE
Sbjct: 61  KYVNPITKLCIIRTSREEYQKVWSAITMVRRIGNCPVLFNLLDLSGSIKACKVAALKCDE 120

Query: 552 AKFEQYKQSIGDKLTPETTQKMLNSLEKIKVL 647
            KFE YK + G  L+ +  Q M N LEKIK+L
Sbjct: 121 MKFEHYKLAAGAPLSTDVNQHMQNCLEKIKIL 152


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