BLASTX nr result
ID: Cimicifuga21_contig00014713
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00014713 (1255 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002267766.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 231 3e-59 emb|CBI32069.3| unnamed protein product [Vitis vinifera] 231 3e-59 ref|XP_002327255.1| predicted protein [Populus trichocarpa] gi|2... 226 7e-57 ref|XP_002268478.1| PREDICTED: probable ribonuclease P/MRP prote... 226 9e-57 ref|XP_002321344.1| predicted protein [Populus trichocarpa] gi|2... 225 2e-56 >ref|XP_002267766.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic-like [Vitis vinifera] Length = 1174 Score = 231 bits (590), Expect(2) = 3e-59 Identities = 116/145 (80%), Positives = 129/145 (88%), Gaps = 1/145 (0%) Frame = -1 Query: 1252 RKRESEQSYNSVANMSGQSPLSKNDVNTIRRSQVPQVRDTLRQLKARDMLPAIWFIFSRK 1073 +KRES+ SY+S A++ GQS LSKND+NTIRRSQVPQV DTL LKARDMLPAIWFIFSRK Sbjct: 391 KKRESDMSYSSFASIHGQSSLSKNDINTIRRSQVPQVMDTLWHLKARDMLPAIWFIFSRK 450 Query: 1072 GCDAAVQYV-DGNLLDEFEMVEVQLALKRFRIQYPDAVREAGVKDLLQGVAAHHAGCLPL 896 GCDA+VQY+ D NLLDE EM EV LALKRFR+QYPDAVRE+ VK LLQGVAAHHAGCLPL Sbjct: 451 GCDASVQYLEDCNLLDESEMSEVDLALKRFRLQYPDAVRESAVKGLLQGVAAHHAGCLPL 510 Query: 895 WKSFIEQLFQKGLVKIVFATETFTA 821 WKSFIE+LFQ+GLVK+VFATET A Sbjct: 511 WKSFIEELFQRGLVKVVFATETLAA 535 Score = 24.6 bits (52), Expect(2) = 3e-59 Identities = 11/15 (73%), Positives = 14/15 (93%) Frame = -2 Query: 819 ARTAVITTLSKRSET 775 ARTAVI++LSKR E+ Sbjct: 541 ARTAVISSLSKRGES 555 >emb|CBI32069.3| unnamed protein product [Vitis vinifera] Length = 1064 Score = 231 bits (590), Expect(2) = 3e-59 Identities = 116/145 (80%), Positives = 129/145 (88%), Gaps = 1/145 (0%) Frame = -1 Query: 1252 RKRESEQSYNSVANMSGQSPLSKNDVNTIRRSQVPQVRDTLRQLKARDMLPAIWFIFSRK 1073 +KRES+ SY+S A++ GQS LSKND+NTIRRSQVPQV DTL LKARDMLPAIWFIFSRK Sbjct: 281 KKRESDMSYSSFASIHGQSSLSKNDINTIRRSQVPQVMDTLWHLKARDMLPAIWFIFSRK 340 Query: 1072 GCDAAVQYV-DGNLLDEFEMVEVQLALKRFRIQYPDAVREAGVKDLLQGVAAHHAGCLPL 896 GCDA+VQY+ D NLLDE EM EV LALKRFR+QYPDAVRE+ VK LLQGVAAHHAGCLPL Sbjct: 341 GCDASVQYLEDCNLLDESEMSEVDLALKRFRLQYPDAVRESAVKGLLQGVAAHHAGCLPL 400 Query: 895 WKSFIEQLFQKGLVKIVFATETFTA 821 WKSFIE+LFQ+GLVK+VFATET A Sbjct: 401 WKSFIEELFQRGLVKVVFATETLAA 425 Score = 24.6 bits (52), Expect(2) = 3e-59 Identities = 11/15 (73%), Positives = 14/15 (93%) Frame = -2 Query: 819 ARTAVITTLSKRSET 775 ARTAVI++LSKR E+ Sbjct: 431 ARTAVISSLSKRGES 445 >ref|XP_002327255.1| predicted protein [Populus trichocarpa] gi|222835625|gb|EEE74060.1| predicted protein [Populus trichocarpa] Length = 154 Score = 226 bits (577), Expect = 7e-57 Identities = 109/152 (71%), Positives = 126/152 (82%) Frame = +3 Query: 192 MVRFRNRYLVMEVFVDPNKDLAKDDPIIITTYNVSKAIKDSVLTNFGECGSAAIVGSFQV 371 MV F+NRY+VMEVF+DPN+DL DDPIIIT YNVSKAIKDS+L NFGECG A+ +GSFQV Sbjct: 1 MVGFKNRYMVMEVFLDPNRDLGVDDPIIITQYNVSKAIKDSILVNFGECGLASSLGSFQV 60 Query: 372 LYVNSITKLCIIRVSREEHEKLWSATTLVRSIGNCPVMFNLLDLSGSSRTCKVAALKCDE 551 YVN ITKLCIIR SREE++K+WSA T+VR IGNCPV+FNLLDLSGS + CKVAALKCDE Sbjct: 61 KYVNPITKLCIIRTSREEYQKVWSAITMVRRIGNCPVLFNLLDLSGSIKACKVAALKCDE 120 Query: 552 AKFEQYKQSIGDKLTPETTQKMLNSLEKIKVL 647 KFE YK + G L+P+ Q M N LEKI +L Sbjct: 121 MKFEHYKLAAGAPLSPDVNQHMQNCLEKINIL 152 >ref|XP_002268478.1| PREDICTED: probable ribonuclease P/MRP protein subunit POP5 [Vitis vinifera] gi|302144009|emb|CBI23114.3| unnamed protein product [Vitis vinifera] Length = 154 Score = 226 bits (576), Expect = 9e-57 Identities = 107/152 (70%), Positives = 130/152 (85%) Frame = +3 Query: 192 MVRFRNRYLVMEVFVDPNKDLAKDDPIIITTYNVSKAIKDSVLTNFGECGSAAIVGSFQV 371 MV F+NRY++MEVF+DPN+DLA DDPIIIT +NVSKAIKDS+L NFGECG A+ GSFQV Sbjct: 1 MVGFKNRYMIMEVFLDPNRDLAVDDPIIITQFNVSKAIKDSILVNFGECGLASSFGSFQV 60 Query: 372 LYVNSITKLCIIRVSREEHEKLWSATTLVRSIGNCPVMFNLLDLSGSSRTCKVAALKCDE 551 YVN ITKLCIIR SREE++K+WSA T+V+SIG+CPV+FNLLDLSGS R C+ AALKCD+ Sbjct: 61 KYVNPITKLCIIRASREEYQKVWSAITMVKSIGHCPVLFNLLDLSGSIRACRNAALKCDK 120 Query: 552 AKFEQYKQSIGDKLTPETTQKMLNSLEKIKVL 647 AKFEQYK +GD+LT + +M N LE+IK+L Sbjct: 121 AKFEQYKLVVGDRLTDDINNQMQNCLERIKIL 152 >ref|XP_002321344.1| predicted protein [Populus trichocarpa] gi|222868340|gb|EEF05471.1| predicted protein [Populus trichocarpa] Length = 154 Score = 225 bits (574), Expect = 2e-56 Identities = 109/152 (71%), Positives = 126/152 (82%) Frame = +3 Query: 192 MVRFRNRYLVMEVFVDPNKDLAKDDPIIITTYNVSKAIKDSVLTNFGECGSAAIVGSFQV 371 MV F+NRY+VMEVF+DPN+DL DDPIIIT YNVSKAIKDS+L NFGECG A+ +GSFQV Sbjct: 1 MVGFKNRYMVMEVFLDPNRDLGVDDPIIITQYNVSKAIKDSILVNFGECGLASSLGSFQV 60 Query: 372 LYVNSITKLCIIRVSREEHEKLWSATTLVRSIGNCPVMFNLLDLSGSSRTCKVAALKCDE 551 YVN ITKLCIIR SREE++K+WSA T+VR IGNCPV+FNLLDLSGS + CKVAALKCDE Sbjct: 61 KYVNPITKLCIIRTSREEYQKVWSAITMVRRIGNCPVLFNLLDLSGSIKACKVAALKCDE 120 Query: 552 AKFEQYKQSIGDKLTPETTQKMLNSLEKIKVL 647 KFE YK + G L+ + Q M N LEKIK+L Sbjct: 121 MKFEHYKLAAGAPLSTDVNQHMQNCLEKIKIL 152