BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00014712
         (1042 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulga...   103   9e-20
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]             101   3e-19
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]             100   5e-19
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]              99   2e-18
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...    98   3e-18

>emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1363

 Score =  103 bits (256), Expect = 9e-20
 Identities = 80/299 (26%), Positives = 126/299 (42%), Gaps = 5/299 (1%)
 Frame = +1

Query: 73   LWKINVPMKIRFFLWQVASNVLPTAHFLLSRGCLVQQDCSMCDSGSDTGLHMFKYCTFAR 252
            LW+ N+P K +  +W    N+LPTA FL  R       C  CD   +  +H+F+ C  A 
Sbjct: 1041 LWRKNIPFKYKLLIWNGIHNILPTALFLAKRIHNFNPQCVACDHPIEDMIHLFRDCCVAS 1100

Query: 253  AVWLSLSLHETVDSTQGVDLVQWFKGVLQNLRSIHSGVDLVLLFALGLWFIWVARNQNRF 432
            +VW+ +  H   ++      ++W + +  NL   H     V  F    W IW +RN+  F
Sbjct: 1101 SVWIEILKHHKPNNQNLFFNLEWEEWIDFNLNQ-HD--YWVTKFTTAFWHIWCSRNKTVF 1157

Query: 433  NGRHVHPASTAT-MILNLYEDFSSCCMPTT--SGISIDIAWIPPDMGWRKLNT-XXXXXX 600
                 HP  T   ++ + + +  +  +  T  +G  + + W PP  G+ KLNT       
Sbjct: 1158 ECAVNHPKFTYNRVVADFFTNIRAFQVNNTQGNGSKVVLRWKPPHQGFLKLNTDGAWKAD 1217

Query: 601  XXXXXXXXVLRNHAGMFIFGFAQPLDFADVLTAECWAVWXXXXXXXXXXMHKIIIEMDSK 780
                    V R+  G +  GFA+ +D      AE  A+            HK+ +E D+K
Sbjct: 1218 WENAGIGGVFRDAVGNWELGFAKRVDAGSPEAAELMAIREGLQVAWDCNYHKLEVECDAK 1277

Query: 781  ALWMILTDE-ENGQIPFNIKDMVDDIRYMAQRCTPISFKWTYREGNGAADVIANWASKQ 954
             +  +L    E    P  +  +V DI  +  R   + F    REGN  A  +A  A  Q
Sbjct: 1278 GVVQLLAKPLEAENHPLGV--IVMDICILLTRHWSVEFLHIKREGNKVAHCLAAEAVNQ 1334


>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
          Length = 1898

 Score =  101 bits (251), Expect = 3e-19
 Identities = 73/297 (24%), Positives = 123/297 (41%), Gaps = 8/297 (2%)
 Frame = +1

Query: 73   LWKINVPMKIRFFLWQVASNVLPTAHFLLSRGCLVQQDCSMCDSGSDTGLHMFKYCTFAR 252
            +W+     KI+ F+W++  N L        RG      C +C    +T  H+F+ C  A 
Sbjct: 1572 IWRATCTEKIKLFMWKIVKNGLMVNVERKRRGLADAASCPVCGEEDETLDHLFRRCLLAE 1631

Query: 253  AVWLSLSLHETVDSTQGVDLVQWFKGVLQNLRSIHSGVDLVLLFALGLWFIWVARNQNRF 432
            A W S     T  ++  + +  W K    + +    G +  L+F   LW +W ARN+  F
Sbjct: 1632 ACWDSAVPPLTFQTSNHLHMHSWMKAACSSQQKDGYGTNWSLIFPYILWNLWKARNRLVF 1691

Query: 433  NGRHVHPASTATMILN---LYEDFSSCCMPTTSGISID----IAWIPPDMGWRKLNT-XX 588
            +     P+     ILN   +    + C +   +G+       + W PP  G+ KLN+   
Sbjct: 1692 DNNITAPSD----ILNRSFMESSEARCLLAKRTGLQTAFQTWVVWSPPAAGFTKLNSDGA 1747

Query: 589  XXXXXXXXXXXXVLRNHAGMFIFGFAQPLDFADVLTAECWAVWXXXXXXXXXXMHKIIIE 768
                        +LRN  G+++ G+   +  A+   AE W +             K+I E
Sbjct: 1748 CKSHSHLASAGGLLRNENGLWVAGYTCNIGTANSFLAELWGLREGLLLAKNRGFTKLIAE 1807

Query: 769  MDSKALWMILTDEENGQIPFNIKDMVDDIRYMAQRCTPISFKWTYREGNGAADVIAN 939
             DS+A+  +L   ++G +  +   +V D + +      I      REGN  AD +AN
Sbjct: 1808 TDSEAVVQVL--RKDGPVTPDASILVKDCKLLLDHFQEIKVTHILREGNQCADFLAN 1862


>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score =  100 bits (250), Expect = 5e-19
 Identities = 73/297 (24%), Positives = 123/297 (41%), Gaps = 8/297 (2%)
 Frame = +1

Query: 73   LWKINVPMKIRFFLWQVASNVLPTAHFLLSRGCLVQQDCSMCDSGSDTGLHMFKYCTFAR 252
            +W+     KI+ F+W++  N L        RG      C +C    +T  H+F+ C  A 
Sbjct: 1040 IWRATCTEKIKLFMWKIVKNGLMVNVERKRRGLADAASCPVCGEEDETLDHLFRRCLLAE 1099

Query: 253  AVWLSLSLHETVDSTQGVDLVQWFKGVLQNLRSIHSGVDLVLLFALGLWFIWVARNQNRF 432
            A W S     T  ++  + +  W K    + +    G +  L+F   LW +W ARN+  F
Sbjct: 1100 ACWDSAVPPLTFQTSNHLHMHSWMKAACSSQQKDGYGTNWSLIFPYILWNLWKARNRLVF 1159

Query: 433  NGRHVHPASTATMILN---LYEDFSSCCMPTTSGISID----IAWIPPDMGWRKLNT-XX 588
            +     P+     ILN   +    + C +   +G+       + W PP  G+ KLN+   
Sbjct: 1160 DNNITAPSD----ILNRSFMESSEARCLLAKRTGLQTAFQTWVVWSPPAAGFTKLNSDGA 1215

Query: 589  XXXXXXXXXXXXVLRNHAGMFIFGFAQPLDFADVLTAECWAVWXXXXXXXXXXMHKIIIE 768
                        +LRN  G+++ G+   +  A+   AE W +             K+I E
Sbjct: 1216 CKSHSHLASAGGLLRNENGLWVAGYICNIGTANSFLAELWGLREGLLLAKNRGFTKLIAE 1275

Query: 769  MDSKALWMILTDEENGQIPFNIKDMVDDIRYMAQRCTPISFKWTYREGNGAADVIAN 939
             DS+A+  +L   ++G +  +   +V D + +      I      REGN  AD +AN
Sbjct: 1276 TDSEAVVQVL--RKDGPVTPDASILVKDCKLLLDHFQEIKVTHILREGNQCADFLAN 1330


>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score = 99.0 bits (245), Expect = 2e-18
 Identities = 72/297 (24%), Positives = 122/297 (41%), Gaps = 8/297 (2%)
 Frame = +1

Query: 73   LWKINVPMKIRFFLWQVASNVLPTAHFLLSRGCLVQQDCSMCDSGSDTGLHMFKYCTFAR 252
            +W+     KI+ F+W++  N L        RG      C +C    +T  H+F+ C  A 
Sbjct: 1040 IWRATCTEKIKLFMWKIVKNGLMVNVERKRRGLADAASCPVCGEEDETLDHLFRRCLLAE 1099

Query: 253  AVWLSLSLHETVDSTQGVDLVQWFKGVLQNLRSIHSGVDLVLLFALGLWFIWVARNQNRF 432
            A W S     T  ++  + +  W K    + +      +  L+F   LW +W ARN+  F
Sbjct: 1100 ACWDSAVPPLTFQTSNHLHMHSWMKAACSSQQKDGYSTNWSLIFPYILWNLWKARNRLVF 1159

Query: 433  NGRHVHPASTATMILN---LYEDFSSCCMPTTSGISID----IAWIPPDMGWRKLNT-XX 588
            +     P+     ILN   +    + C +   +G+       + W PP  G+ KLN+   
Sbjct: 1160 DNNITAPSD----ILNRSFMESSEARCLLAKRTGLQTAFQTWVVWSPPAAGFTKLNSDGA 1215

Query: 589  XXXXXXXXXXXXVLRNHAGMFIFGFAQPLDFADVLTAECWAVWXXXXXXXXXXMHKIIIE 768
                        +LRN  G+++ G+   +  A+   AE W +             K+I E
Sbjct: 1216 CKSHSHLASAGGLLRNENGLWVAGYTCNIGTANSFLAELWGLREGLLLAKNRGFTKLIAE 1275

Query: 769  MDSKALWMILTDEENGQIPFNIKDMVDDIRYMAQRCTPISFKWTYREGNGAADVIAN 939
             DS+A+  +L   ++G +  +   +V D + +      I      REGN  AD +AN
Sbjct: 1276 TDSEAVVQVL--RKDGPVTPDASILVKDCKLLLDHFQEIKVTHILREGNQCADFLAN 1330


>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1374

 Score = 98.2 bits (243), Expect = 3e-18
 Identities = 89/319 (27%), Positives = 127/319 (39%), Gaps = 16/319 (5%)
 Frame = +1

Query: 58   PWVANLWKINVPMKIRFFLWQVASNVLPTAHFLLSRGCLVQQDCSMCDSGSDTGLHMFKY 237
            P    +WK++VP KI  FLW+  +N L  A  L  R    ++ C  C S  +T  H+   
Sbjct: 1049 PIFQQIWKLDVPPKIHHFLWRCVNNCLSVASNLAYRHLAREKSCVRCPSHGETVNHLLFK 1108

Query: 238  CTFARAVWLSLSLHETVDSTQGVDLVQWFKGVLQNLRSIHSGVDLVLLFALGLWFIWVAR 417
            C FAR  W    L           L +    VL   +S     D   L    LW +W  R
Sbjct: 1109 CPFARLTWAISPLPAPPGGEWAESLFRNMHHVLSVHKSQPEESDHHALIPWILWRLWKNR 1168

Query: 418  NQNRFNGRHVHPASTATMILNLYEDFSSC-----CMPTTSGISID--IAWIPPDMGWRKL 576
            N   F GR     +   +IL   ED  +        P  +  + D  + W PP  GW K 
Sbjct: 1169 NDLVFKGREF---TAPQVILKATEDMDAWNNRKEPQPQVTSSTRDRCVKWQPPSHGWVKC 1225

Query: 577  NT-XXXXXXXXXXXXXXVLRNHAGMFIF-GFAQPLDFADVLTAECWAVWXXXXXXXXXXM 750
            NT               VLRNH G  ++ G         VL  E  A+            
Sbjct: 1226 NTDGAWSKDLGNCGVGWVLRNHTGRLLWLGLRALPSQQSVLETEVEALRWAVLSLSRFNY 1285

Query: 751  HKIIIEMDSKALWMILTDEENGQIPFNIKDMVDDIRYMAQRCTPISFKWTYREGNGAADV 930
             ++I E DS+ L  ++ +E +  IP ++   + DIR + +    + F++T REGN  AD 
Sbjct: 1286 RRVIFESDSQYLVSLIQNEMD--IP-SLAPRIQDIRNLLRHFEEVKFQFTRREGNNVADR 1342

Query: 931  IA-------NWASKQASLT 966
             A       N+  K  S+T
Sbjct: 1343 TARESLSLMNYDPKMYSIT 1361