BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00014664
         (1104 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269136.1| PREDICTED: pentatricopeptide repeat-containi...   425   e-116
emb|CAN76479.1| hypothetical protein VITISV_028175 [Vitis vinifera]   424   e-116
ref|XP_002532584.1| pentatricopeptide repeat-containing protein,...   371   e-100
ref|XP_004144802.1| PREDICTED: pentatricopeptide repeat-containi...   356   5e-96
ref|XP_004172369.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   356   6e-96

>ref|XP_002269136.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71210-like
            [Vitis vinifera]
          Length = 881

 Score =  425 bits (1092), Expect = e-116
 Identities = 215/367 (58%), Positives = 271/367 (73%)
 Frame = -3

Query: 1102 DEAYRVLKDFIRQGYFPGKSASSILADALCREGKLDKMKELIIMALELNVRPSDALCVKF 923
            DEAY VLK  + QGYFPGK   SILADALC+EGKLDKMKEL+++AL+ N+ PS +   KF
Sbjct: 440  DEAYHVLKHSLEQGYFPGKKTFSILADALCQEGKLDKMKELVLVALDRNIMPSASTYDKF 499

Query: 922  ISALCKTGKVEDGYLIYGELNGMKRTTNRYTYFDLVRGFNMIHRGDMGARLLIEMQENGH 743
            I ALCK  +V+DGYLI GELN + +  ++ TYF+++RGFN+++R D+ ARLLIE+QE GH
Sbjct: 500  ILALCKARRVDDGYLIQGELNKINKVASKNTYFNMIRGFNILNRADIAARLLIELQEKGH 559

Query: 742  KPTRNLYRAVICCICTMGNPENQFFKLLEMQLSSQEPNCCVYNFFIDGAGHAKRPDLARE 563
             PTR+L+RAVIC +C M N E QF KLLE+QLS QEPNC VYNFFIDGAGHAK+P+LARE
Sbjct: 560  TPTRSLFRAVICRLCDMDNAEKQFLKLLELQLSHQEPNCQVYNFFIDGAGHAKKPELARE 619

Query: 562  VFEMMIRNGIEPNNASKLFMLQSYLKSERIADALNFYDDICMKIPPERSTPGRKLNNTMV 383
            VFEMM+R+GI PN +S + MLQSYLK+ERI+DALNF+ D+      +R   GRKL NTMV
Sbjct: 620  VFEMMVRSGIVPNLSSDILMLQSYLKNERISDALNFFSDL-----QKRRKVGRKLCNTMV 674

Query: 382  VGLSKAKKPELALEVLRKLREKGAKPSLECYEELVKSFCSIKNYDMVVEVIDDLIKTQRQ 203
            VGL KA K ++ALE+L+++REKG  PSLECYEELVK  C+ K YD+VV +IDDL +  R 
Sbjct: 675  VGLCKANKVDIALEILKEIREKGVTPSLECYEELVKVLCTNKRYDVVVNLIDDLERVGRH 734

Query: 202  VSSFIGNVLLLHSFRSREVYQAWVRSGVMTKEASQFDEASRSDEASQSDKASQSNSLTLG 23
            VSSFIGNVLLLHS ++ E+++ WV                    A  +     S +L LG
Sbjct: 735  VSSFIGNVLLLHSLKTPELFETWV-------------------HAKDAHNEISSPNLILG 775

Query: 22   ELVGLFS 2
            +L+G FS
Sbjct: 776  QLIGEFS 782


>emb|CAN76479.1| hypothetical protein VITISV_028175 [Vitis vinifera]
          Length = 1173

 Score =  424 bits (1091), Expect = e-116
 Identities = 215/367 (58%), Positives = 270/367 (73%)
 Frame = -3

Query: 1102 DEAYRVLKDFIRQGYFPGKSASSILADALCREGKLDKMKELIIMALELNVRPSDALCVKF 923
            DEAY VLK  + QGYFPGK   SILADALC+EGKLDKMKEL+++AL+ N+ PS +   KF
Sbjct: 440  DEAYHVLKHSLEQGYFPGKKTFSILADALCQEGKLDKMKELVLVALDRNIMPSASTYDKF 499

Query: 922  ISALCKTGKVEDGYLIYGELNGMKRTTNRYTYFDLVRGFNMIHRGDMGARLLIEMQENGH 743
            I ALCK  +V+DGYLI GELN + +  ++ TYF+++RGFN+++R D+ ARLLIE+QE GH
Sbjct: 500  ILALCKARRVDDGYLIQGELNKINKVASKNTYFNMIRGFNILNRADIAARLLIELQEKGH 559

Query: 742  KPTRNLYRAVICCICTMGNPENQFFKLLEMQLSSQEPNCCVYNFFIDGAGHAKRPDLARE 563
             PTR+L+RAVIC +C M N E QF KLLE+QLS QEPNC VYNFFIDGAGHAK+P+LARE
Sbjct: 560  TPTRSLFRAVICRLCDMDNAEKQFLKLLELQLSHQEPNCQVYNFFIDGAGHAKKPELARE 619

Query: 562  VFEMMIRNGIEPNNASKLFMLQSYLKSERIADALNFYDDICMKIPPERSTPGRKLNNTMV 383
            VFEMM+R+GI PN +S + MLQSYLK+ERI+DALNF+ D+      +R   GRKL NTMV
Sbjct: 620  VFEMMVRSGIVPNLSSDILMLQSYLKNERISDALNFFSDL-----QKRRKVGRKLCNTMV 674

Query: 382  VGLSKAKKPELALEVLRKLREKGAKPSLECYEELVKSFCSIKNYDMVVEVIDDLIKTQRQ 203
            VGL KA K ++ALE+L+++REKG  PSLECYEELVK  C  K YD+VV +IDDL +  R 
Sbjct: 675  VGLCKANKVDIALEILKEIREKGVTPSLECYEELVKVLCKNKRYDVVVNLIDDLERVGRH 734

Query: 202  VSSFIGNVLLLHSFRSREVYQAWVRSGVMTKEASQFDEASRSDEASQSDKASQSNSLTLG 23
            VSSFIGNVLLLHS ++ E+++ WV                    A  +     S +L LG
Sbjct: 735  VSSFIGNVLLLHSLKTPELFETWV-------------------HAKDAHNEISSPNLILG 775

Query: 22   ELVGLFS 2
            +L+G FS
Sbjct: 776  QLIGEFS 782


>ref|XP_002532584.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223527693|gb|EEF29801.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 895

 Score =  371 bits (952), Expect = e-100
 Identities = 192/367 (52%), Positives = 246/367 (67%)
 Frame = -3

Query: 1102 DEAYRVLKDFIRQGYFPGKSASSILADALCREGKLDKMKELIIMALELNVRPSDALCVKF 923
            D+AY VLK     GYFPGK A S+L DAL REGK++ M EL   ALE N  PSD++  KF
Sbjct: 454  DDAYHVLKSSSEHGYFPGKRAFSMLTDALHREGKVEMMNELFFWALERNFIPSDSMYDKF 513

Query: 922  ISALCKTGKVEDGYLIYGELNGMKRTTNRYTYFDLVRGFNMIHRGDMGARLLIEMQENGH 743
            ISALCK  ++EDGYLI+GELN   R   + TY +L+ GFN  +RGD+ ARLLIEMQ+ GH
Sbjct: 514  ISALCKARRLEDGYLIHGELNRFNRVAKKSTYSNLIHGFNKFNRGDIAARLLIEMQDKGH 573

Query: 742  KPTRNLYRAVICCICTMGNPENQFFKLLEMQLSSQEPNCCVYNFFIDGAGHAKRPDLARE 563
             P R L+RAVI  +C M +PE +FF  L+MQLS ++PNC +YNFFIDGAGHAK+PD+AR+
Sbjct: 574  LPARTLFRAVIRSLCEMDDPETRFFNYLDMQLSRRDPNCQIYNFFIDGAGHAKKPDIARK 633

Query: 562  VFEMMIRNGIEPNNASKLFMLQSYLKSERIADALNFYDDICMKIPPERSTPGRKLNNTMV 383
            VFEMM R+GIEPN ++ + MLQSYLKSERI+DALNF+D +      +R   GRKL NTMV
Sbjct: 634  VFEMMQRSGIEPNQSTNILMLQSYLKSERISDALNFFDAV-----GQRRKIGRKLYNTMV 688

Query: 382  VGLSKAKKPELALEVLRKLREKGAKPSLECYEELVKSFCSIKNYDMVVEVIDDLIKTQRQ 203
            VGL K  K + AL    +++  G  PS+ECYE L+   CS K Y   + +I DL K  R+
Sbjct: 689  VGLCKVNKVDSALSFFLEMQSNGMVPSVECYEVLIMLLCSNKRYSTAITLITDLEKFGRR 748

Query: 202  VSSFIGNVLLLHSFRSREVYQAWVRSGVMTKEASQFDEASRSDEASQSDKASQSNSLTLG 23
            V+SFIGN+LLLHS +S E+Y AW++   +  E S                    N L LG
Sbjct: 749  VTSFIGNILLLHSLKSDELYDAWLQVREVQNETS-------------------LNLLILG 789

Query: 22   ELVGLFS 2
            +++G F+
Sbjct: 790  QIIGAFA 796


>ref|XP_004144802.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71210-like
            [Cucumis sativus]
          Length = 913

 Score =  356 bits (914), Expect = 5e-96
 Identities = 186/335 (55%), Positives = 234/335 (69%)
 Frame = -3

Query: 1102 DEAYRVLKDFIRQGYFPGKSASSILADALCREGKLDKMKELIIMALELNVRPSDALCVKF 923
            DEAYR+LK  I +GYFPGK   SILA ALCREGKLDKMKEL+I ALE N  P+D+   KF
Sbjct: 464  DEAYRILKCSIYEGYFPGKKTFSILASALCREGKLDKMKELVIFALERNCMPNDSTYDKF 523

Query: 922  ISALCKTGKVEDGYLIYGELNGMKRTTNRYTYFDLVRGFNMIHRGDMGARLLIEMQENGH 743
            I ALC+  +VEDGYLI+ ELN +     R TYF L+ GF    RGD+ ARLLIEM E GH
Sbjct: 524  IYALCRARRVEDGYLIHCELNRINVVATRSTYFVLIEGFIKSGRGDIAARLLIEMLEKGH 583

Query: 742  KPTRNLYRAVICCICTMGNPENQFFKLLEMQLSSQEPNCCVYNFFIDGAGHAKRPDLARE 563
             P R L+R+VI C+  M N E QFF LLE+QLS QEPN  VYN FI  AG AK+P+LA E
Sbjct: 584  NPPRGLFRSVILCLIEMENMEKQFFNLLELQLSCQEPNSEVYNNFIYAAGRAKKPELANE 643

Query: 562  VFEMMIRNGIEPNNASKLFMLQSYLKSERIADALNFYDDICMKIPPERSTPGRKLNNTMV 383
            V+ MM+RNGI+PN +S + +L+ YL SERI+DAL F  ++      +  T GRK++N +V
Sbjct: 644  VYHMMLRNGIQPNLSSDILLLRGYLYSERISDALIFLSNL-----SQTRTIGRKISNVVV 698

Query: 382  VGLSKAKKPELALEVLRKLREKGAKPSLECYEELVKSFCSIKNYDMVVEVIDDLIKTQRQ 203
            VGL KA K  LA +  + LR+KG  PS+ECYEEL K FC  + YD VV +++DL K  R 
Sbjct: 699  VGLCKANKTNLAFDFWKHLRDKGTVPSIECYEELAKHFCQNERYDAVVNLLNDLDKVGRP 758

Query: 202  VSSFIGNVLLLHSFRSREVYQAWVRSGVMTKEASQ 98
            ++SF+GNVLL  S +++++Y+AWV S V   E SQ
Sbjct: 759  LTSFLGNVLLYSSLKTQKLYKAWVNSRVGQVETSQ 793


>ref|XP_004172369.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At1g71210-like, partial [Cucumis sativus]
          Length = 889

 Score =  356 bits (913), Expect = 6e-96
 Identities = 186/335 (55%), Positives = 234/335 (69%)
 Frame = -3

Query: 1102 DEAYRVLKDFIRQGYFPGKSASSILADALCREGKLDKMKELIIMALELNVRPSDALCVKF 923
            DEAYR+LK  I +GYFPGK   SILA ALCREGKLDKMKEL+I ALE N  P+D+   KF
Sbjct: 440  DEAYRILKCSIYEGYFPGKKXFSILASALCREGKLDKMKELVIFALERNCMPNDSTYDKF 499

Query: 922  ISALCKTGKVEDGYLIYGELNGMKRTTNRYTYFDLVRGFNMIHRGDMGARLLIEMQENGH 743
            I ALC+  +VEDGYLI+ ELN +     R TYF L+ GF    RGD+ ARLLIEM E GH
Sbjct: 500  IYALCRARRVEDGYLIHCELNRINVVATRSTYFVLIEGFIKSGRGDIAARLLIEMLEKGH 559

Query: 742  KPTRNLYRAVICCICTMGNPENQFFKLLEMQLSSQEPNCCVYNFFIDGAGHAKRPDLARE 563
             P R L+R+VI C+  M N E QFF LLE+QLS QEPN  VYN FI  AG AK+P+LA E
Sbjct: 560  NPPRGLFRSVILCLIEMENMEKQFFNLLELQLSCQEPNSEVYNNFIYAAGRAKKPELANE 619

Query: 562  VFEMMIRNGIEPNNASKLFMLQSYLKSERIADALNFYDDICMKIPPERSTPGRKLNNTMV 383
            V+ MM+RNGI+PN +S + +L+ YL SERI+DAL F  ++      +  T GRK++N +V
Sbjct: 620  VYHMMLRNGIQPNLSSDILLLRGYLYSERISDALIFLSNL-----SQTRTIGRKISNVVV 674

Query: 382  VGLSKAKKPELALEVLRKLREKGAKPSLECYEELVKSFCSIKNYDMVVEVIDDLIKTQRQ 203
            VGL KA K  LA +  + LR+KG  PS+ECYEEL K FC  + YD VV +++DL K  R 
Sbjct: 675  VGLCKANKTNLAFDFWKHLRDKGTVPSIECYEELAKHFCQNERYDAVVNLLNDLDKVGRP 734

Query: 202  VSSFIGNVLLLHSFRSREVYQAWVRSGVMTKEASQ 98
            ++SF+GNVLL  S +++++Y+AWV S V   E SQ
Sbjct: 735  LTSFLGNVLLYSSLKTQKLYKAWVNSRVGQVETSQ 769